RNA–Protein interactions for RNA: ENST00000476041.1

LSM10-202, Transcript of LSM10, U7 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM10, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10-202ENST00000476041 MAST1Q9Y2H9 1570 aa22.21■■□□□ 1.15
LSM10-202ENST00000476041 KIF3BO15066 747 aa22.21■■□□□ 1.15
LSM10-202ENST00000476041 MYO3AQ8NEV4 1616 aa22.2■■□□□ 1.15
LSM10-202ENST00000476041 ZNF142P52746 1687 aaPredicted RBP22.2■■□□□ 1.15
LSM10-202ENST00000476041 CAMSAP1Q5T5Y3 1602 aa22.18■■□□□ 1.14
LSM10-202ENST00000476041 KDM5DQ9BY66 1539 aa22.17■■□□□ 1.14
LSM10-202ENST00000476041 CEP170BQ9Y4F5 1589 aaPredicted RBP22.16■■□□□ 1.14
LSM10-202ENST00000476041 APLP2Q06481 763 aa22.14■■□□□ 1.13
LSM10-202ENST00000476041 PZPP20742 1482 aa22.12■■□□□ 1.13
LSM10-202ENST00000476041 PLA2R1Q13018 1463 aa22.12■■□□□ 1.13
LSM10-202ENST00000476041 RNF17Q9BXT8 1623 aaKnown RBP22.12■■□□□ 1.13
LSM10-202ENST00000476041 WASHC2CQ9Y4E1 1318 aa22.11■■□□□ 1.13
LSM10-202ENST00000476041 LTBP4Q8N2S1 1624 aa22.11■■□□□ 1.13
LSM10-202ENST00000476041 EIF2AK4Q9P2K8 1649 aaKnown RBP22.1■■□□□ 1.13
LSM10-202ENST00000476041 PTPN23Q9H3S7 1636 aa22.09■■□□□ 1.13
LSM10-202ENST00000476041 A2ML1A8K2U0 1454 aa22.09■■□□□ 1.13
LSM10-202ENST00000476041 TCOF1Q13428 1488 aaKnown RBP22.08■■□□□ 1.12
LSM10-202ENST00000476041 FBXO31Q5XUX0 539 aaPredicted RBP22.07■■□□□ 1.12
LSM10-202ENST00000476041 TNRQ92752 1358 aa22.07■■□□□ 1.12
LSM10-202ENST00000476041 SHANK2Q9UPX8 1470 aa22.07■■□□□ 1.12
LSM10-202ENST00000476041 CROCC2H7BZ55 1655 aa22.07■■□□□ 1.12
LSM10-202ENST00000476041 NCKAP5LQ9HCH0 1330 aa22.06■■□□□ 1.12
LSM10-202ENST00000476041 DNMT1P26358 1616 aaKnown RBP22.06■■□□□ 1.12
LSM10-202ENST00000476041 PKD2Q13563 968 aa22.06■■□□□ 1.12
LSM10-202ENST00000476041 ZC3H13Q5T200 1668 aaKnown RBP22.06■■□□□ 1.12
LSM10-202ENST00000476041 DUOX2Q9NRD8 1548 aa22.06■■□□□ 1.12
LSM10-202ENST00000476041 ABCC5O15440 1437 aa22.06■■□□□ 1.12
LSM10-202ENST00000476041 IQSEC2Q5JU85 1478 aa22.05■■□□□ 1.12
LSM10-202ENST00000476041 MROH1Q8NDA8 1641 aa22.05■■□□□ 1.12
LSM10-202ENST00000476041 FGD6Q6ZV73 1430 aa22.05■■□□□ 1.12
LSM10-202ENST00000476041 ABCC3O15438 1527 aa22.04■■□□□ 1.12
LSM10-202ENST00000476041 DAPK1P53355 1430 aa22.01■■□□□ 1.11
LSM10-202ENST00000476041 KIF15Q9NS87 1388 aa22■■□□□ 1.11
LSM10-202ENST00000476041 NLRP1Q9C000 1473 aa21.99■■□□□ 1.11
LSM10-202ENST00000476041 ERBINQ96RT1 1412 aa21.98■■□□□ 1.11
LSM10-202ENST00000476041 MED1Q15648 1581 aaPredicted RBP21.97■■□□□ 1.11
LSM10-202ENST00000476041 CEP152O94986 1710 aa21.96■■□□□ 1.11
LSM10-202ENST00000476041 POLR1AO95602 1720 aaPredicted RBP21.96■■□□□ 1.11
LSM10-202ENST00000476041 PRDM15P57071 1507 aaPredicted RBP21.96■■□□□ 1.11
LSM10-202ENST00000476041 RRP7BPQ9NSQ0 103 aa21.95■■□□□ 1.1
LSM10-202ENST00000476041 ZNF335Q9H4Z2 1342 aaPredicted RBP21.94■■□□□ 1.1
LSM10-202ENST00000476041 ERVK-7P63135 1459 aa21.94■■□□□ 1.1
LSM10-202ENST00000476041 NEURL4Q96JN8 1562 aa21.94■■□□□ 1.1
LSM10-202ENST00000476041 UGGT1Q9NYU2 1555 aa21.94■■□□□ 1.1
LSM10-202ENST00000476041 DEPDC5O75140 1603 aa21.92■■□□□ 1.1
LSM10-202ENST00000476041 THEMISQ8N1K5 641 aaPredicted RBP21.92■■□□□ 1.1
LSM10-202ENST00000476041 ANKRD30AQ9BXX3 1397 aa21.91■■□□□ 1.1
LSM10-202ENST00000476041 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.9■■□□□ 1.1
LSM10-202ENST00000476041 ARHGAP31Q2M1Z3 1444 aa21.89■■□□□ 1.1
LSM10-202ENST00000476041 ANKLE2Q86XL3 938 aa21.88■■□□□ 1.09
LSM10-202ENST00000476041 ADGRL2O95490 1459 aa21.88■■□□□ 1.09
LSM10-202ENST00000476041 CHIC2Q9UKJ5 165 aa21.87■■□□□ 1.09
LSM10-202ENST00000476041 CFAP65Q6ZU64 1925 aaKnown RBP21.86■■□□□ 1.09
LSM10-202ENST00000476041 MED14O60244 1454 aa21.86■■□□□ 1.09
LSM10-202ENST00000476041 UBAP1LF5GYI3 381 aa21.86■■□□□ 1.09
LSM10-202ENST00000476041 KANK1Q14678 1352 aa21.84■■□□□ 1.09
LSM10-202ENST00000476041 VWDEQ8N2E2 1590 aa21.83■■□□□ 1.09
LSM10-202ENST00000476041 FAM50AQ14320 339 aaKnown RBP21.83■■□□□ 1.09
LSM10-202ENST00000476041 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.83■■□□□ 1.09
LSM10-202ENST00000476041 LMTK2Q8IWU2 1503 aa21.83■■□□□ 1.09
LSM10-202ENST00000476041 UBR1Q8IWV7 1749 aa21.83■■□□□ 1.08
LSM10-202ENST00000476041 NPHP4O75161 1426 aaPredicted RBP21.82■■□□□ 1.08
LSM10-202ENST00000476041 CPS1P31327 1500 aa21.8■■□□□ 1.08
LSM10-202ENST00000476041 IQGAP1P46940 1657 aa21.79■■□□□ 1.08
LSM10-202ENST00000476041 ANKRD50Q9ULJ7 1429 aa21.76■■□□□ 1.07
LSM10-202ENST00000476041 SLIT1O75093 1534 aa21.75■■□□□ 1.07
LSM10-202ENST00000476041 ARHGAP23Q9P227 1491 aa21.75■■□□□ 1.07
LSM10-202ENST00000476041 EFCAB6Q5THR3 1501 aa21.75■■□□□ 1.07
LSM10-202ENST00000476041 PIK3C2BO00750 1634 aa21.74■■□□□ 1.07
LSM10-202ENST00000476041 SCAF11Q99590 1463 aaKnown RBP21.73■■□□□ 1.07
LSM10-202ENST00000476041 HSPA1LP34931 641 aa21.73■■□□□ 1.07
LSM10-202ENST00000476041 KDM5AP29375 1690 aaKnown RBP21.72■■□□□ 1.07
LSM10-202ENST00000476041 NOS1P29475 1434 aa21.72■■□□□ 1.07
LSM10-202ENST00000476041 SYNMO15061 1565 aa21.71■■□□□ 1.07
LSM10-202ENST00000476041 LTKP29376 864 aa21.68■■□□□ 1.06
LSM10-202ENST00000476041 IDI1Q13907 227 aa21.68■■□□□ 1.06
LSM10-202ENST00000476041 TXNDC2Q86VQ3 553 aa21.68■■□□□ 1.06
LSM10-202ENST00000476041 ROCK1Q13464 1354 aa21.68■■□□□ 1.06
LSM10-202ENST00000476041 RPRD2Q5VT52 1461 aaKnown RBP21.68■■□□□ 1.06
LSM10-202ENST00000476041 STRCP1A6NGW2 1772 aa21.67■■□□□ 1.06
LSM10-202ENST00000476041 TMEM2Q9UHN6 1383 aa21.67■■□□□ 1.06
LSM10-202ENST00000476041 PHF23Q9BUL5 403 aaPredicted RBP21.67■■□□□ 1.06
LSM10-202ENST00000476041 TET3O43151 1660 aa21.66■■□□□ 1.06
LSM10-202ENST00000476041 UNC13BO14795 1591 aa21.66■■□□□ 1.06
LSM10-202ENST00000476041 EID1Q9Y6B2 187 aa21.65■■□□□ 1.06
LSM10-202ENST00000476041 SCAF1Q9H7N4 1312 aaKnown RBP21.64■■□□□ 1.05
LSM10-202ENST00000476041 STAG3Q9UJ98 1225 aa21.64■■□□□ 1.05
LSM10-202ENST00000476041 TOM1O60784 492 aa21.63■■□□□ 1.05
LSM10-202ENST00000476041 SLC52A1Q9NWF4 448 aa21.63■■□□□ 1.05
LSM10-202ENST00000476041 ADGRB3O60242 1522 aa21.63■■□□□ 1.05
LSM10-202ENST00000476041 GCC2Q8IWJ2 1684 aa21.63■■□□□ 1.05
LSM10-202ENST00000476041 LRRC7Q96NW7 1537 aa21.62■■□□□ 1.05
LSM10-202ENST00000476041 PIP4K2BP78356 416 aa21.6■■□□□ 1.05
LSM10-202ENST00000476041 PPARGC1BQ86YN6 1023 aaKnown RBP21.6■■□□□ 1.05
LSM10-202ENST00000476041 ALKQ9UM73 1620 aa21.58■■□□□ 1.05
LSM10-202ENST00000476041 IQGAP3Q86VI3 1631 aa21.58■■□□□ 1.04
LSM10-202ENST00000476041 E9PCH4 1651 aa21.56■■□□□ 1.04
LSM10-202ENST00000476041 ITGAEP38570 1179 aa21.55■■□□□ 1.04
LSM10-202ENST00000476041 MYO5BQ9ULV0 1848 aa21.52■■□□□ 1.04
LSM10-202ENST00000476041 TMEM131LA2VDJ0 1609 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms