RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 MYOM3Q5VTT5 1437 aa14.54□□□□□ -0.08
U2AF1-209ENST00000475639 CDCA7LQ96GN5 454 aa14.54□□□□□ -0.08
U2AF1-209ENST00000475639 PANK2Q9BZ23 570 aa14.54□□□□□ -0.08
U2AF1-209ENST00000475639 KDM6BO15054 1643 aa14.53□□□□□ -0.08
U2AF1-209ENST00000475639 CASKIN1Q8WXD9 1431 aa14.53□□□□□ -0.08
U2AF1-209ENST00000475639 NPHP1O15259 732 aa14.53□□□□□ -0.08
U2AF1-209ENST00000475639 MPHOSPH9Q99550 1183 aa14.53□□□□□ -0.08
U2AF1-209ENST00000475639 MIA2Q96PC5 1412 aa14.52□□□□□ -0.08
U2AF1-209ENST00000475639 CHIC2Q9UKJ5 165 aa14.52□□□□□ -0.08
U2AF1-209ENST00000475639 OS9Q13438 667 aaPredicted RBP14.52□□□□□ -0.09
U2AF1-209ENST00000475639 CDCA8Q53HL2 280 aa14.52□□□□□ -0.09
U2AF1-209ENST00000475639 NOC3LQ8WTT2 800 aaKnown RBP14.52□□□□□ -0.09
U2AF1-209ENST00000475639 GOLGA2Q08379 1002 aa14.51□□□□□ -0.09
U2AF1-209ENST00000475639 PDE3BQ13370 1112 aa14.51□□□□□ -0.09
U2AF1-209ENST00000475639 C20orf194Q5TEA3 1177 aa14.51□□□□□ -0.09
U2AF1-209ENST00000475639 RPRD2Q5VT52 1461 aaKnown RBP14.51□□□□□ -0.09
U2AF1-209ENST00000475639 FSD2A1L4K1 749 aa14.5□□□□□ -0.09
U2AF1-209ENST00000475639 RBM10P98175 930 aaKnown RBP14.5□□□□□ -0.09
U2AF1-209ENST00000475639 GCC2Q8IWJ2 1684 aa14.5□□□□□ -0.09
U2AF1-209ENST00000475639 CARMIL1Q5VZK9 1371 aa14.5□□□□□ -0.09
U2AF1-209ENST00000475639 BRD4O60885 1362 aaPredicted RBP14.5□□□□□ -0.09
U2AF1-209ENST00000475639 A0A0U1RQG5 324 aaPredicted RBP14.49□□□□□ -0.09
U2AF1-209ENST00000475639 CENPQQ7L2Z9 268 aaPredicted RBP14.49□□□□□ -0.09
U2AF1-209ENST00000475639 HSCBQ8IWL3 235 aa14.49□□□□□ -0.09
U2AF1-209ENST00000475639 MAPK8IP3Q9UPT6 1336 aa14.49□□□□□ -0.09
U2AF1-209ENST00000475639 FGD5Q6ZNL6 1462 aa14.49□□□□□ -0.09
U2AF1-209ENST00000475639 PRDM4Q9UKN5 801 aa14.49□□□□□ -0.09
U2AF1-209ENST00000475639 GOLGA6L3A6NEY3 463 aa14.48□□□□□ -0.09
U2AF1-209ENST00000475639 SLKQ9H2G2 1235 aaPredicted RBP14.48□□□□□ -0.09
U2AF1-209ENST00000475639 USP19O94966 1318 aa14.48□□□□□ -0.09
U2AF1-209ENST00000475639 MTUS2Q5JR59 1369 aa14.48□□□□□ -0.09
U2AF1-209ENST00000475639 KNSTRNQ9Y448 316 aa14.48□□□□□ -0.09
U2AF1-209ENST00000475639 ARID4BQ4LE39 1312 aaPredicted RBP14.47□□□□□ -0.09
U2AF1-209ENST00000475639 CENPJQ9HC77 1338 aaPredicted RBP14.47□□□□□ -0.09
U2AF1-209ENST00000475639 MYBBP1AQ9BQG0 1328 aaKnown RBP14.47□□□□□ -0.09
U2AF1-209ENST00000475639 ANKRD30BQ9BXX2 1392 aa14.47□□□□□ -0.09
U2AF1-209ENST00000475639 PDCL3Q9H2J4 239 aa14.47□□□□□ -0.09
U2AF1-209ENST00000475639 ERBB4Q15303 1308 aa14.46□□□□□ -0.09
U2AF1-209ENST00000475639 MCCP23508 829 aa14.46□□□□□ -0.09
U2AF1-209ENST00000475639 PRM3Q9NNZ6 103 aa14.46□□□□□ -0.09
U2AF1-209ENST00000475639 PABPN1Q86U42 306 aaKnown RBP eCLIP14.46□□□□□ -0.1
U2AF1-209ENST00000475639 CFAP44Q96MT7 982 aa14.46□□□□□ -0.1
U2AF1-209ENST00000475639 USP47Q96K76 1375 aa14.45□□□□□ -0.1
U2AF1-209ENST00000475639 AAMPQ13685 434 aa14.45□□□□□ -0.1
U2AF1-209ENST00000475639 NEUROD2Q15784 382 aa14.45□□□□□ -0.1
U2AF1-209ENST00000475639 GOLGA6L1Q8N7Z2 621 aa14.45□□□□□ -0.1
U2AF1-209ENST00000475639 ANTXR1Q9H6X2 564 aa14.45□□□□□ -0.1
U2AF1-209ENST00000475639 CALD1Q05682 793 aaKnown RBP14.45□□□□□ -0.1
U2AF1-209ENST00000475639 KIF15Q9NS87 1388 aa14.45□□□□□ -0.1
U2AF1-209ENST00000475639 ESPNB1AK53 854 aa14.43□□□□□ -0.1
U2AF1-209ENST00000475639 VIRMAQ69YN4 1812 aaKnown RBP14.42□□□□□ -0.1
U2AF1-209ENST00000475639 GZF1Q9H116 711 aaPredicted RBP14.42□□□□□ -0.1
U2AF1-209ENST00000475639 BICRAQ9NZM4 1560 aa14.42□□□□□ -0.1
U2AF1-209ENST00000475639 GNL2Q13823 731 aaKnown RBP14.41□□□□□ -0.1
U2AF1-209ENST00000475639 CCDC34Q96HJ3 373 aa14.41□□□□□ -0.1
U2AF1-209ENST00000475639 ISY1Q9ULR0 285 aaKnown RBP14.41□□□□□ -0.1
U2AF1-209ENST00000475639 SNAPC4Q5SXM2 1469 aa14.41□□□□□ -0.1
U2AF1-209ENST00000475639 ROCK2O75116 1388 aaKnown RBP14.4□□□□□ -0.1
U2AF1-209ENST00000475639 TPM2P07951 284 aa14.4□□□□□ -0.1
U2AF1-209ENST00000475639 HTATSF1O43719 755 aaKnown RBP14.4□□□□□ -0.1
U2AF1-209ENST00000475639 RALBP1Q15311 655 aa14.4□□□□□ -0.1
U2AF1-209ENST00000475639 KDM5CP41229 1560 aa14.4□□□□□ -0.1
U2AF1-209ENST00000475639 LRRIQ1Q96JM4 1722 aa14.4□□□□□ -0.1
U2AF1-209ENST00000475639 CFTRP13569 1480 aa14.4□□□□□ -0.1
U2AF1-209ENST00000475639 EFCAB5A4FU69 1503 aa14.4□□□□□ -0.1
U2AF1-209ENST00000475639 SEC24BO95487 1268 aa14.39□□□□□ -0.11
U2AF1-209ENST00000475639 PTMSP20962 102 aa14.38□□□□□ -0.11
U2AF1-209ENST00000475639 GBP4Q96PP9 640 aa14.38□□□□□ -0.11
U2AF1-209ENST00000475639 SUPT6HQ7KZ85 1726 aaKnown RBP14.37□□□□□ -0.11
U2AF1-209ENST00000475639 MRE11P49959 708 aa14.37□□□□□ -0.11
U2AF1-209ENST00000475639 THOC2Q8NI27 1593 aaKnown RBP14.37□□□□□ -0.11
U2AF1-209ENST00000475639 NLRP1Q9C000 1473 aa14.37□□□□□ -0.11
U2AF1-209ENST00000475639 MBD5Q9P267 1494 aa14.37□□□□□ -0.11
U2AF1-209ENST00000475639 CALRP27797 417 aaKnown RBP14.36□□□□□ -0.11
U2AF1-209ENST00000475639 NLRP13Q86W25 1043 aa14.36□□□□□ -0.11
U2AF1-209ENST00000475639 CEP89Q96ST8 783 aa14.36□□□□□ -0.11
U2AF1-209ENST00000475639 MCM4P33991 863 aa14.35□□□□□ -0.11
U2AF1-209ENST00000475639 SYAP1Q96A49 352 aaPredicted RBP14.35□□□□□ -0.11
U2AF1-209ENST00000475639 LMOD2Q6P5Q4 547 aa14.35□□□□□ -0.11
U2AF1-209ENST00000475639 KIAA1211Q6ZU35 1233 aa14.35□□□□□ -0.11
U2AF1-209ENST00000475639 UGGT2Q9NYU1 1516 aa14.34□□□□□ -0.11
U2AF1-209ENST00000475639 TCOF1Q13428 1488 aaKnown RBP14.34□□□□□ -0.11
U2AF1-209ENST00000475639 TPM4P67936 248 aa14.34□□□□□ -0.11
U2AF1-209ENST00000475639 ARID3AQ99856 593 aa14.34□□□□□ -0.11
U2AF1-209ENST00000475639 GRPEL1Q9HAV7 217 aa14.34□□□□□ -0.11
U2AF1-209ENST00000475639 RGL3Q3MIN7 710 aa14.34□□□□□ -0.11
U2AF1-209ENST00000475639 BLMP54132 1417 aaPredicted RBP14.33□□□□□ -0.12
U2AF1-209ENST00000475639 E9PCH4 1651 aa14.32□□□□□ -0.12
U2AF1-209ENST00000475639 ARHGEF11O15085 1522 aa14.32□□□□□ -0.12
U2AF1-209ENST00000475639 KIF14Q15058 1648 aa14.32□□□□□ -0.12
U2AF1-209ENST00000475639 PARD3Q8TEW0 1356 aa14.32□□□□□ -0.12
U2AF1-209ENST00000475639 TRAK2O60296 914 aa14.32□□□□□ -0.12
U2AF1-209ENST00000475639 TBC1D2Q9BYX2 928 aa14.32□□□□□ -0.12
U2AF1-209ENST00000475639 EHBP1L1Q8N3D4 1523 aa14.31□□□□□ -0.12
U2AF1-209ENST00000475639 SENP3Q9H4L4 574 aaPredicted RBP14.31□□□□□ -0.12
U2AF1-209ENST00000475639 TPM3P06753 285 aa14.3□□□□□ -0.12
U2AF1-209ENST00000475639 SETQ01105 290 aaPredicted RBP14.3□□□□□ -0.12
U2AF1-209ENST00000475639 ZMYM4Q5VZL5 1548 aa14.3□□□□□ -0.12
U2AF1-209ENST00000475639 RIPK4P57078 832 aa14.29□□□□□ -0.12
U2AF1-209ENST00000475639 U2SURPO15042 1029 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms