RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 SPATA31E1Q6ZUB1 1445 aa21.51■■□□□ 1.03
RPUSD3-215ENST00000475470 DCAF11Q8TEB1 546 aa21.5■■□□□ 1.03
RPUSD3-215ENST00000475470 KDM2AQ9Y2K7 1162 aa21.5■■□□□ 1.03
RPUSD3-215ENST00000475470 PLA2R1Q13018 1463 aa21.5■■□□□ 1.03
RPUSD3-215ENST00000475470 CFAP74Q9C0B2 1584 aa21.48■■□□□ 1.03
RPUSD3-215ENST00000475470 CCDC7Q96M83 1385 aa21.46■■□□□ 1.03
RPUSD3-215ENST00000475470 ZNF518AQ6AHZ1 1483 aa21.46■■□□□ 1.03
RPUSD3-215ENST00000475470 RALGAPBQ86X10 1494 aa21.46■■□□□ 1.03
RPUSD3-215ENST00000475470 C11orf95C9JLR9 678 aaPredicted RBP21.46■■□□□ 1.03
RPUSD3-215ENST00000475470 ATP10AO60312 1499 aa21.46■■□□□ 1.03
RPUSD3-215ENST00000475470 DHX29Q7Z478 1369 aaKnown RBP21.45■■□□□ 1.02
RPUSD3-215ENST00000475470 USP47Q96K76 1375 aa21.45■■□□□ 1.02
RPUSD3-215ENST00000475470 CCER2I3L3R5 266 aa21.45■■□□□ 1.02
RPUSD3-215ENST00000475470 DEPDC5O75140 1603 aa21.44■■□□□ 1.02
RPUSD3-215ENST00000475470 CYB5RLQ6IPT4 315 aa21.44■■□□□ 1.02
RPUSD3-215ENST00000475470 RGL3Q3MIN7 710 aa21.44■■□□□ 1.02
RPUSD3-215ENST00000475470 GTF3C3Q9Y5Q9 886 aa21.44■■□□□ 1.02
RPUSD3-215ENST00000475470 KANK1Q14678 1352 aa21.43■■□□□ 1.02
RPUSD3-215ENST00000475470 KIF3BO15066 747 aa21.43■■□□□ 1.02
RPUSD3-215ENST00000475470 CARD11Q9BXL7 1154 aa21.41■■□□□ 1.02
RPUSD3-215ENST00000475470 KIDINS220Q9ULH0 1771 aa21.41■■□□□ 1.02
RPUSD3-215ENST00000475470 EIF2AK4Q9P2K8 1649 aaKnown RBP21.41■■□□□ 1.02
RPUSD3-215ENST00000475470 KDM5CP41229 1560 aa21.4■■□□□ 1.02
RPUSD3-215ENST00000475470 CNTLNQ9NXG0 1405 aa21.4■■□□□ 1.02
RPUSD3-215ENST00000475470 E9PCH4 1651 aa21.4■■□□□ 1.02
RPUSD3-215ENST00000475470 POLR1AO95602 1720 aaPredicted RBP21.4■■□□□ 1.02
RPUSD3-215ENST00000475470 POGZQ7Z3K3 1410 aa21.4■■□□□ 1.02
RPUSD3-215ENST00000475470 KIF7Q2M1P5 1343 aa21.39■■□□□ 1.01
RPUSD3-215ENST00000475470 A2MP01023 1474 aa21.37■■□□□ 1.01
RPUSD3-215ENST00000475470 RIMBP3CA6NJZ7 1639 aa21.37■■□□□ 1.01
RPUSD3-215ENST00000475470 RIMBP3BA6NNM3 1639 aa21.37■■□□□ 1.01
RPUSD3-215ENST00000475470 RIMBP3Q9UFD9 1639 aa21.37■■□□□ 1.01
RPUSD3-215ENST00000475470 TET3O43151 1660 aa21.37■■□□□ 1.01
RPUSD3-215ENST00000475470 PRAG1Q86YV5 1406 aa21.37■■□□□ 1.01
RPUSD3-215ENST00000475470 VWDEQ8N2E2 1590 aa21.36■■□□□ 1.01
RPUSD3-215ENST00000475470 NEO1Q92859 1461 aa21.36■■□□□ 1.01
RPUSD3-215ENST00000475470 ROCK2O75116 1388 aaKnown RBP21.35■■□□□ 1.01
RPUSD3-215ENST00000475470 PRDM15P57071 1507 aaPredicted RBP21.35■■□□□ 1.01
RPUSD3-215ENST00000475470 MLH3Q9UHC1 1453 aa21.34■■□□□ 1.01
RPUSD3-215ENST00000475470 TRPM2O94759 1503 aa21.33■■□□□ 1
RPUSD3-215ENST00000475470 SPHKAPQ2M3C7 1700 aa21.32■■□□□ 1
RPUSD3-215ENST00000475470 PTPRTO14522 1441 aa21.32■■□□□ 1
RPUSD3-215ENST00000475470 HECW2Q9P2P5 1572 aa21.32■■□□□ 1
RPUSD3-215ENST00000475470 TRPM1Q7Z4N2 1603 aa21.32■■□□□ 1
RPUSD3-215ENST00000475470 MROH1Q8NDA8 1641 aa21.32■■□□□ 1
RPUSD3-215ENST00000475470 BCORL1Q5H9F3 1711 aa21.32■■□□□ 1
RPUSD3-215ENST00000475470 ARID4BQ4LE39 1312 aaPredicted RBP21.3■■□□□ 1
RPUSD3-215ENST00000475470 MAP3K4Q9Y6R4 1608 aa21.29■■□□□ 1
RPUSD3-215ENST00000475470 ST20-MTHFSA0A0A6YYL1 179 aa21.28■■□□□ 1
RPUSD3-215ENST00000475470 POLR3GLQ9BT43 218 aa21.28■■□□□ 1
RPUSD3-215ENST00000475470 RAPGEF3O95398 923 aa21.28■■□□□ 1
RPUSD3-215ENST00000475470 GLI2P10070 1586 aa21.26■□□□□ 0.99
RPUSD3-215ENST00000475470 CEP152O94986 1710 aa21.26■□□□□ 0.99
RPUSD3-215ENST00000475470 CLTCL1P53675 1640 aa21.26■□□□□ 0.99
RPUSD3-215ENST00000475470 NBPF1Q3BBV0 1214 aa21.26■□□□□ 0.99
RPUSD3-215ENST00000475470 RNF17Q9BXT8 1623 aaKnown RBP21.25■□□□□ 0.99
RPUSD3-215ENST00000475470 GPRASP1Q5JY77 1395 aa21.24■□□□□ 0.99
RPUSD3-215ENST00000475470 FRMPD1Q5SYB0 1578 aa21.24■□□□□ 0.99
RPUSD3-215ENST00000475470 ABCA6Q8N139 1617 aa21.24■□□□□ 0.99
RPUSD3-215ENST00000475470 EFCAB6Q5THR3 1501 aa21.24■□□□□ 0.99
RPUSD3-215ENST00000475470 LMTK2Q8IWU2 1503 aa21.22■□□□□ 0.99
RPUSD3-215ENST00000475470 FAM69CQ0P6D2 419 aa21.22■□□□□ 0.99
RPUSD3-215ENST00000475470 GGT6Q6P531 493 aa21.22■□□□□ 0.99
RPUSD3-215ENST00000475470 PRKRIP1Q9H875 184 aaPredicted RBP21.22■□□□□ 0.99
RPUSD3-215ENST00000475470 PELP1Q8IZL8 1130 aaKnown RBP21.21■□□□□ 0.99
RPUSD3-215ENST00000475470 LAMC1P11047 1609 aa21.21■□□□□ 0.99
RPUSD3-215ENST00000475470 STAC3Q96MF2 364 aa21.2■□□□□ 0.99
RPUSD3-215ENST00000475470 PPRC1Q5VV67 1664 aaKnown RBP21.2■□□□□ 0.98
RPUSD3-215ENST00000475470 RICTORQ6R327 1708 aa21.19■□□□□ 0.98
RPUSD3-215ENST00000475470 DIP2BQ9P265 1576 aa21.17■□□□□ 0.98
RPUSD3-215ENST00000475470 DIP2CQ9Y2E4 1556 aa21.16■□□□□ 0.98
RPUSD3-215ENST00000475470 MADDQ8WXG6 1647 aa21.16■□□□□ 0.98
RPUSD3-215ENST00000475470 WASHC2CQ9Y4E1 1318 aa21.15■□□□□ 0.98
RPUSD3-215ENST00000475470 NEURL4Q96JN8 1562 aa21.15■□□□□ 0.98
RPUSD3-215ENST00000475470 UGGT1Q9NYU2 1555 aa21.15■□□□□ 0.98
RPUSD3-215ENST00000475470 KIF1BO60333 1816 aa21.13■□□□□ 0.97
RPUSD3-215ENST00000475470 NPATQ14207 1427 aa21.11■□□□□ 0.97
RPUSD3-215ENST00000475470 ABCC3O15438 1527 aa21.1■□□□□ 0.97
RPUSD3-215ENST00000475470 YEATS2Q9ULM3 1422 aa21.1■□□□□ 0.97
RPUSD3-215ENST00000475470 CCDC184Q52MB2 194 aa21.09■□□□□ 0.97
RPUSD3-215ENST00000475470 TSPOAP1O95153 1857 aa21.09■□□□□ 0.97
RPUSD3-215ENST00000475470 MRS2Q9HD23 443 aa21.09■□□□□ 0.97
RPUSD3-215ENST00000475470 TESK2Q96S53 571 aa21.08■□□□□ 0.96
RPUSD3-215ENST00000475470 CFAP65Q6ZU64 1925 aaKnown RBP21.07■□□□□ 0.96
RPUSD3-215ENST00000475470 CNGB1Q14028 1251 aaPredicted RBP21.07■□□□□ 0.96
RPUSD3-215ENST00000475470 CAMSAP1Q5T5Y3 1602 aa21.06■□□□□ 0.96
RPUSD3-215ENST00000475470 CHGAP10645 457 aaKnown RBP21.06■□□□□ 0.96
RPUSD3-215ENST00000475470 COL17A1Q9UMD9 1497 aaPredicted RBP21.06■□□□□ 0.96
RPUSD3-215ENST00000475470 TMF1P82094 1093 aa21.05■□□□□ 0.96
RPUSD3-215ENST00000475470 MYOM2P54296 1465 aa21.05■□□□□ 0.96
RPUSD3-215ENST00000475470 ZMYM4Q5VZL5 1548 aa21.05■□□□□ 0.96
RPUSD3-215ENST00000475470 HNRNPUQ00839 825 aaKnown RBP eCLIP21.05■□□□□ 0.96
RPUSD3-215ENST00000475470 MROH2AA6NES4 1674 aa21.04■□□□□ 0.96
RPUSD3-215ENST00000475470 IQGAP1P46940 1657 aa21.04■□□□□ 0.96
RPUSD3-215ENST00000475470 DISP3Q9P2K9 1392 aa21.03■□□□□ 0.96
RPUSD3-215ENST00000475470 KIAA1210Q9ULL0 1709 aa21.03■□□□□ 0.96
RPUSD3-215ENST00000475470 SCAF11Q99590 1463 aaKnown RBP21.02■□□□□ 0.96
RPUSD3-215ENST00000475470 ADGRB3O60242 1522 aa21.02■□□□□ 0.96
RPUSD3-215ENST00000475470 ADGRF5Q8IZF2 1346 aa21.02■□□□□ 0.95
RPUSD3-215ENST00000475470 IFT172Q9UG01 1749 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms