RNA–Protein interactions for RNA: ENST00000475460.6

COMMD3-BMI1-203, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 2

Gene COMMD3-BMI1, Length 508 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-203ENST00000475460 AFAP1Q8N556 730 aa12.3□□□□□ -0.44
COMMD3-BMI1-203ENST00000475460 CERKQ8TCT0 537 aa12.3□□□□□ -0.44
COMMD3-BMI1-203ENST00000475460 HECW1Q76N89 1606 aa12.29□□□□□ -0.44
COMMD3-BMI1-203ENST00000475460 C9orf84Q5VXU9 1444 aa12.28□□□□□ -0.44
COMMD3-BMI1-203ENST00000475460 CLIP1P30622 1438 aa12.27□□□□□ -0.45
COMMD3-BMI1-203ENST00000475460 ESF1Q9H501 851 aaKnown RBP12.26□□□□□ -0.45
COMMD3-BMI1-203ENST00000475460 CCDC61Q9Y6R9 512 aa12.26□□□□□ -0.45
COMMD3-BMI1-203ENST00000475460 TROQ12816 1431 aaPredicted RBP12.26□□□□□ -0.45
COMMD3-BMI1-203ENST00000475460 ARHGAP35Q9NRY4 1499 aa12.26□□□□□ -0.45
COMMD3-BMI1-203ENST00000475460 RIOK3O14730 519 aaKnown RBP12.25□□□□□ -0.45
COMMD3-BMI1-203ENST00000475460 CD44P16070 742 aaKnown RBP12.25□□□□□ -0.45
COMMD3-BMI1-203ENST00000475460 ZNF518AQ6AHZ1 1483 aa12.25□□□□□ -0.45
COMMD3-BMI1-203ENST00000475460 CHGAP10645 457 aaKnown RBP12.24□□□□□ -0.45
COMMD3-BMI1-203ENST00000475460 PLCB2Q00722 1185 aa12.24□□□□□ -0.45
COMMD3-BMI1-203ENST00000475460 ARHGAP5Q13017 1502 aa12.24□□□□□ -0.45
COMMD3-BMI1-203ENST00000475460 ARHGEF12Q9NZN5 1544 aa12.24□□□□□ -0.45
COMMD3-BMI1-203ENST00000475460 SIGLEC1Q9BZZ2 1709 aa12.23□□□□□ -0.45
COMMD3-BMI1-203ENST00000475460 BBXQ8WY36 941 aaPredicted RBP12.21□□□□□ -0.45
COMMD3-BMI1-203ENST00000475460 KIF14Q15058 1648 aa12.21□□□□□ -0.46
COMMD3-BMI1-203ENST00000475460 UHRF1BP1Q6BDS2 1440 aa12.2□□□□□ -0.46
COMMD3-BMI1-203ENST00000475460 FER1L4A9Z1Z3 1794 aa12.2□□□□□ -0.46
COMMD3-BMI1-203ENST00000475460 C19orf67A6NJJ6 358 aa12.19□□□□□ -0.46
COMMD3-BMI1-203ENST00000475460 POTEHQ6S545 545 aa12.19□□□□□ -0.46
COMMD3-BMI1-203ENST00000475460 HS6ST3Q8IZP7 471 aa12.19□□□□□ -0.46
COMMD3-BMI1-203ENST00000475460 ZRANB1Q9UGI0 708 aa12.19□□□□□ -0.46
COMMD3-BMI1-203ENST00000475460 MYO5CQ9NQX4 1742 aa12.18□□□□□ -0.46
COMMD3-BMI1-203ENST00000475460 ZNF777Q9ULD5 760 aaPredicted RBP12.18□□□□□ -0.46
COMMD3-BMI1-203ENST00000475460 MLH3Q9UHC1 1453 aa12.17□□□□□ -0.46
COMMD3-BMI1-203ENST00000475460 HAX1O00165 279 aa12.17□□□□□ -0.46
COMMD3-BMI1-203ENST00000475460 TRAPPC8Q9Y2L5 1435 aa12.17□□□□□ -0.46
COMMD3-BMI1-203ENST00000475460 KDM5CP41229 1560 aa12.17□□□□□ -0.46
COMMD3-BMI1-203ENST00000475460 VGFO15240 615 aaPredicted RBP12.16□□□□□ -0.46
COMMD3-BMI1-203ENST00000475460 CASKIN1Q8WXD9 1431 aa12.15□□□□□ -0.46
COMMD3-BMI1-203ENST00000475460 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.14□□□□□ -0.47
COMMD3-BMI1-203ENST00000475460 ZFP91Q96JP5 570 aaPredicted RBP12.14□□□□□ -0.47
COMMD3-BMI1-203ENST00000475460 PCDHB8Q9UN66 801 aa12.14□□□□□ -0.47
COMMD3-BMI1-203ENST00000475460 PCDHB13Q9Y5F0 798 aa12.14□□□□□ -0.47
COMMD3-BMI1-203ENST00000475460 CCDC18Q5T9S5 1454 aa12.14□□□□□ -0.47
COMMD3-BMI1-203ENST00000475460 DIP2CQ9Y2E4 1556 aa12.13□□□□□ -0.47
COMMD3-BMI1-203ENST00000475460 PREX1Q8TCU6 1659 aa12.13□□□□□ -0.47
COMMD3-BMI1-203ENST00000475460 TAOK2Q9UL54 1235 aa12.13□□□□□ -0.47
COMMD3-BMI1-203ENST00000475460 SPAG9O60271 1321 aaKnown RBP12.12□□□□□ -0.47
COMMD3-BMI1-203ENST00000475460 CNTLNQ9NXG0 1405 aa12.12□□□□□ -0.47
COMMD3-BMI1-203ENST00000475460 AGLP35573 1532 aa12.12□□□□□ -0.47
COMMD3-BMI1-203ENST00000475460 HNRNPMP52272 730 aaKnown RBP eCLIP12.12□□□□□ -0.47
COMMD3-BMI1-203ENST00000475460 KIF12Q96FN5 646 aa12.12□□□□□ -0.47
COMMD3-BMI1-203ENST00000475460 SGIP1Q9BQI5 828 aa12.12□□□□□ -0.47
COMMD3-BMI1-203ENST00000475460 DISP3Q9P2K9 1392 aa12.12□□□□□ -0.47
COMMD3-BMI1-203ENST00000475460 REREQ9P2R6 1566 aa12.12□□□□□ -0.47
COMMD3-BMI1-203ENST00000475460 PTPRTO14522 1441 aa12.11□□□□□ -0.47
COMMD3-BMI1-203ENST00000475460 MAP3K13O43283 966 aa12.11□□□□□ -0.47
COMMD3-BMI1-203ENST00000475460 NKX1-1Q15270 411 aaPredicted RBP12.11□□□□□ -0.47
COMMD3-BMI1-203ENST00000475460 CFDP1Q9UEE9 299 aaPredicted RBP12.11□□□□□ -0.47
COMMD3-BMI1-203ENST00000475460 ABCC1P33527 1531 aa12.11□□□□□ -0.47
COMMD3-BMI1-203ENST00000475460 STK25O00506 426 aa12.1□□□□□ -0.47
COMMD3-BMI1-203ENST00000475460 PAXIP1Q6ZW49 1069 aaPredicted RBP12.1□□□□□ -0.47
COMMD3-BMI1-203ENST00000475460 ZNF579Q8NAF0 562 aaKnown RBP12.1□□□□□ -0.47
COMMD3-BMI1-203ENST00000475460 PHF12Q96QT6 1004 aa12.1□□□□□ -0.47
COMMD3-BMI1-203ENST00000475460 ABCA6Q8N139 1617 aa12.1□□□□□ -0.47
COMMD3-BMI1-203ENST00000475460 ZMYM3Q14202 1370 aa12.09□□□□□ -0.47
COMMD3-BMI1-203ENST00000475460 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.09□□□□□ -0.47
COMMD3-BMI1-203ENST00000475460 ZNF467Q7Z7K2 595 aaPredicted RBP12.08□□□□□ -0.48
COMMD3-BMI1-203ENST00000475460 IFNL1Q8IU54 200 aa12.08□□□□□ -0.48
COMMD3-BMI1-203ENST00000475460 BCL11BQ9C0K0 894 aaPredicted RBP12.08□□□□□ -0.48
COMMD3-BMI1-203ENST00000475460 SETD1BQ9UPS6 1966 aaKnown RBP12.08□□□□□ -0.48
COMMD3-BMI1-203ENST00000475460 CDC42BPBQ9Y5S2 1711 aa12.08□□□□□ -0.48
COMMD3-BMI1-203ENST00000475460 PREX2Q70Z35 1606 aa12.08□□□□□ -0.48
COMMD3-BMI1-203ENST00000475460 GPATCH8Q9UKJ3 1502 aaKnown RBP12.07□□□□□ -0.48
COMMD3-BMI1-203ENST00000475460 GGT6Q6P531 493 aa12.07□□□□□ -0.48
COMMD3-BMI1-203ENST00000475460 STRCQ7RTU9 1775 aa12.07□□□□□ -0.48
COMMD3-BMI1-203ENST00000475460 FYCO1Q9BQS8 1478 aa12.07□□□□□ -0.48
COMMD3-BMI1-203ENST00000475460 CCNB3Q8WWL7 1395 aa12.06□□□□□ -0.48
COMMD3-BMI1-203ENST00000475460 NPATQ14207 1427 aa12.06□□□□□ -0.48
COMMD3-BMI1-203ENST00000475460 NCOA1Q15788 1441 aa12.06□□□□□ -0.48
COMMD3-BMI1-203ENST00000475460 ILDR2Q71H61 639 aa12.06□□□□□ -0.48
COMMD3-BMI1-203ENST00000475460 CFAP44Q96MT7 982 aa12.06□□□□□ -0.48
COMMD3-BMI1-203ENST00000475460 NCKAP5LQ9HCH0 1330 aa12.06□□□□□ -0.48
COMMD3-BMI1-203ENST00000475460 KIAA1107Q9UPP5 1409 aa12.05□□□□□ -0.48
COMMD3-BMI1-203ENST00000475460 LRRIQ1Q96JM4 1722 aa12.05□□□□□ -0.48
COMMD3-BMI1-203ENST00000475460 SAMD9LQ8IVG5 1584 aa12.05□□□□□ -0.48
COMMD3-BMI1-203ENST00000475460 C3P01024 1663 aa12.04□□□□□ -0.48
COMMD3-BMI1-203ENST00000475460 ITSN2Q9NZM3 1697 aa12.04□□□□□ -0.48
COMMD3-BMI1-203ENST00000475460 HAP1P54257 671 aaPredicted RBP12.04□□□□□ -0.48
COMMD3-BMI1-203ENST00000475460 STK24Q9Y6E0 443 aa12.04□□□□□ -0.48
COMMD3-BMI1-203ENST00000475460 SYCP2Q9BX26 1530 aa12.04□□□□□ -0.48
COMMD3-BMI1-203ENST00000475460 MTUS2Q5JR59 1369 aa12.04□□□□□ -0.48
COMMD3-BMI1-203ENST00000475460 PLEKHH2Q8IVE3 1493 aa12.03□□□□□ -0.48
COMMD3-BMI1-203ENST00000475460 KIDINS220Q9ULH0 1771 aa12.03□□□□□ -0.48
COMMD3-BMI1-203ENST00000475460 SOCS7O14512 581 aa12.03□□□□□ -0.48
COMMD3-BMI1-203ENST00000475460 A2MP01023 1474 aa12.02□□□□□ -0.48
COMMD3-BMI1-203ENST00000475460 EVX2Q03828 476 aa12.02□□□□□ -0.49
COMMD3-BMI1-203ENST00000475460 PDAP1Q13442 181 aaKnown RBP12.02□□□□□ -0.49
COMMD3-BMI1-203ENST00000475460 SPRYD3Q8NCJ5 442 aa12.02□□□□□ -0.49
COMMD3-BMI1-203ENST00000475460 CAMSAP1Q5T5Y3 1602 aa12.01□□□□□ -0.49
COMMD3-BMI1-203ENST00000475460 UBAP1LF5GYI3 381 aa12.01□□□□□ -0.49
COMMD3-BMI1-203ENST00000475460 CLCN6P51797 869 aa12.01□□□□□ -0.49
COMMD3-BMI1-203ENST00000475460 ZNF335Q9H4Z2 1342 aaPredicted RBP12.01□□□□□ -0.49
COMMD3-BMI1-203ENST00000475460 ZNF644Q9H582 1327 aaPredicted RBP12.01□□□□□ -0.49
COMMD3-BMI1-203ENST00000475460 LTBP4Q8N2S1 1624 aa12□□□□□ -0.49
COMMD3-BMI1-203ENST00000475460 PSEN1P49768 467 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms