RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 ZNF518AQ6AHZ1 1483 aa25.8■■□□□ 1.72
SEC61A2-213ENST00000475268 CENPBP07199 599 aaPredicted RBP25.79■■□□□ 1.72
SEC61A2-213ENST00000475268 PLA2R1Q13018 1463 aa25.78■■□□□ 1.72
SEC61A2-213ENST00000475268 DHX29Q7Z478 1369 aaKnown RBP25.75■■□□□ 1.71
SEC61A2-213ENST00000475268 KDM2AQ9Y2K7 1162 aa25.74■■□□□ 1.71
SEC61A2-213ENST00000475268 KIDINS220Q9ULH0 1771 aa25.74■■□□□ 1.71
SEC61A2-213ENST00000475268 KIF3BO15066 747 aa25.73■■□□□ 1.71
SEC61A2-213ENST00000475268 POGZQ7Z3K3 1410 aa25.73■■□□□ 1.71
SEC61A2-213ENST00000475268 DCAF11Q8TEB1 546 aa25.73■■□□□ 1.71
SEC61A2-213ENST00000475268 DEPDC5O75140 1603 aa25.72■■□□□ 1.71
SEC61A2-213ENST00000475268 UHRF1BP1Q6BDS2 1440 aa25.72■■□□□ 1.71
SEC61A2-213ENST00000475268 WASHC2AQ641Q2 1341 aa25.71■■□□□ 1.71
SEC61A2-213ENST00000475268 NEO1Q92859 1461 aa25.7■■□□□ 1.7
SEC61A2-213ENST00000475268 ATP10AO60312 1499 aa25.69■■□□□ 1.7
SEC61A2-213ENST00000475268 KANK1Q14678 1352 aa25.69■■□□□ 1.7
SEC61A2-213ENST00000475268 EIF2AK4Q9P2K8 1649 aaKnown RBP25.68■■□□□ 1.7
SEC61A2-213ENST00000475268 KDM5CP41229 1560 aa25.68■■□□□ 1.7
SEC61A2-213ENST00000475268 RGL3Q3MIN7 710 aa25.68■■□□□ 1.7
SEC61A2-213ENST00000475268 SPATA31E1Q6ZUB1 1445 aa25.68■■□□□ 1.7
SEC61A2-213ENST00000475268 E9PCH4 1651 aa25.66■■□□□ 1.7
SEC61A2-213ENST00000475268 MAP3K4Q9Y6R4 1608 aa25.65■■□□□ 1.7
SEC61A2-213ENST00000475268 MLH3Q9UHC1 1453 aa25.65■■□□□ 1.7
SEC61A2-213ENST00000475268 A2MP01023 1474 aa25.64■■□□□ 1.7
SEC61A2-213ENST00000475268 RALGAPBQ86X10 1494 aa25.64■■□□□ 1.7
SEC61A2-213ENST00000475268 RAPGEF3O95398 923 aa25.63■■□□□ 1.69
SEC61A2-213ENST00000475268 HECW2Q9P2P5 1572 aa25.63■■□□□ 1.69
SEC61A2-213ENST00000475268 C11orf95C9JLR9 678 aaPredicted RBP25.63■■□□□ 1.69
SEC61A2-213ENST00000475268 VWDEQ8N2E2 1590 aa25.63■■□□□ 1.69
SEC61A2-213ENST00000475268 USP47Q96K76 1375 aa25.62■■□□□ 1.69
SEC61A2-213ENST00000475268 ANP32CO43423 234 aa25.62■■□□□ 1.69
SEC61A2-213ENST00000475268 PRDM15P57071 1507 aaPredicted RBP25.62■■□□□ 1.69
SEC61A2-213ENST00000475268 GLI2P10070 1586 aa25.62■■□□□ 1.69
SEC61A2-213ENST00000475268 TET3O43151 1660 aa25.61■■□□□ 1.69
SEC61A2-213ENST00000475268 MROH1Q8NDA8 1641 aa25.61■■□□□ 1.69
SEC61A2-213ENST00000475268 FAM69CQ0P6D2 419 aa25.59■■□□□ 1.69
SEC61A2-213ENST00000475268 CARD11Q9BXL7 1154 aa25.59■■□□□ 1.69
SEC61A2-213ENST00000475268 CCDC7Q96M83 1385 aa25.59■■□□□ 1.69
SEC61A2-213ENST00000475268 PRAG1Q86YV5 1406 aa25.56■■□□□ 1.68
SEC61A2-213ENST00000475268 TRPM2O94759 1503 aa25.56■■□□□ 1.68
SEC61A2-213ENST00000475268 PTPRTO14522 1441 aa25.55■■□□□ 1.68
SEC61A2-213ENST00000475268 SPHKAPQ2M3C7 1700 aa25.55■■□□□ 1.68
SEC61A2-213ENST00000475268 ABCA6Q8N139 1617 aa25.55■■□□□ 1.68
SEC61A2-213ENST00000475268 FRMPD1Q5SYB0 1578 aa25.54■■□□□ 1.68
SEC61A2-213ENST00000475268 DIP2BQ9P265 1576 aa25.54■■□□□ 1.68
SEC61A2-213ENST00000475268 ROCK2O75116 1388 aaKnown RBP25.53■■□□□ 1.68
SEC61A2-213ENST00000475268 KIF7Q2M1P5 1343 aa25.53■■□□□ 1.68
SEC61A2-213ENST00000475268 RNF17Q9BXT8 1623 aaKnown RBP25.51■■□□□ 1.67
SEC61A2-213ENST00000475268 RICTORQ6R327 1708 aa25.5■■□□□ 1.67
SEC61A2-213ENST00000475268 GGT6Q6P531 493 aa25.5■■□□□ 1.67
SEC61A2-213ENST00000475268 SCAF1Q9H7N4 1312 aaKnown RBP25.5■■□□□ 1.67
SEC61A2-213ENST00000475268 CNTLNQ9NXG0 1405 aa25.5■■□□□ 1.67
SEC61A2-213ENST00000475268 TRPM1Q7Z4N2 1603 aa25.49■■□□□ 1.67
SEC61A2-213ENST00000475268 POLR1AO95602 1720 aaPredicted RBP25.49■■□□□ 1.67
SEC61A2-213ENST00000475268 CLTCL1P53675 1640 aa25.49■■□□□ 1.67
SEC61A2-213ENST00000475268 EFCAB6Q5THR3 1501 aa25.48■■□□□ 1.67
SEC61A2-213ENST00000475268 CCER2I3L3R5 266 aa25.48■■□□□ 1.67
SEC61A2-213ENST00000475268 BCORL1Q5H9F3 1711 aa25.47■■□□□ 1.67
SEC61A2-213ENST00000475268 CEP152O94986 1710 aa25.46■■□□□ 1.67
SEC61A2-213ENST00000475268 LMTK2Q8IWU2 1503 aa25.46■■□□□ 1.67
SEC61A2-213ENST00000475268 DIP2CQ9Y2E4 1556 aa25.46■■□□□ 1.67
SEC61A2-213ENST00000475268 PPRC1Q5VV67 1664 aaKnown RBP25.46■■□□□ 1.67
SEC61A2-213ENST00000475268 NBPF1Q3BBV0 1214 aa25.45■■□□□ 1.66
SEC61A2-213ENST00000475268 ST20-MTHFSA0A0A6YYL1 179 aa25.44■■□□□ 1.66
SEC61A2-213ENST00000475268 TSPOAP1O95153 1857 aa25.43■■□□□ 1.66
SEC61A2-213ENST00000475268 POLR3GLQ9BT43 218 aa25.42■■□□□ 1.66
SEC61A2-213ENST00000475268 YEATS2Q9ULM3 1422 aa25.41■■□□□ 1.66
SEC61A2-213ENST00000475268 WASHC2CQ9Y4E1 1318 aa25.41■■□□□ 1.66
SEC61A2-213ENST00000475268 UGGT1Q9NYU2 1555 aa25.4■■□□□ 1.66
SEC61A2-213ENST00000475268 GPRASP1Q5JY77 1395 aa25.4■■□□□ 1.66
SEC61A2-213ENST00000475268 ARID4BQ4LE39 1312 aaPredicted RBP25.38■■□□□ 1.65
SEC61A2-213ENST00000475268 ABCC3O15438 1527 aa25.36■■□□□ 1.65
SEC61A2-213ENST00000475268 NPATQ14207 1427 aa25.35■■□□□ 1.65
SEC61A2-213ENST00000475268 STAC3Q96MF2 364 aa25.34■■□□□ 1.65
SEC61A2-213ENST00000475268 LAMC1P11047 1609 aa25.34■■□□□ 1.65
SEC61A2-213ENST00000475268 MADDQ8WXG6 1647 aa25.34■■□□□ 1.65
SEC61A2-213ENST00000475268 GTF3C3Q9Y5Q9 886 aa25.34■■□□□ 1.65
SEC61A2-213ENST00000475268 ZMYM4Q5VZL5 1548 aa25.33■■□□□ 1.65
SEC61A2-213ENST00000475268 NEURL4Q96JN8 1562 aa25.32■■□□□ 1.64
SEC61A2-213ENST00000475268 KIF1BO60333 1816 aa25.31■■□□□ 1.64
SEC61A2-213ENST00000475268 CAMSAP1Q5T5Y3 1602 aa25.29■■□□□ 1.64
SEC61A2-213ENST00000475268 CFAP65Q6ZU64 1925 aaKnown RBP25.28■■□□□ 1.64
SEC61A2-213ENST00000475268 PRKRIP1Q9H875 184 aaPredicted RBP25.28■■□□□ 1.64
SEC61A2-213ENST00000475268 CHGAP10645 457 aaKnown RBP25.27■■□□□ 1.64
SEC61A2-213ENST00000475268 KIF13AQ9H1H9 1805 aa25.26■■□□□ 1.63
SEC61A2-213ENST00000475268 MROH2AA6NES4 1674 aa25.24■■□□□ 1.63
SEC61A2-213ENST00000475268 ADGRB3O60242 1522 aa25.22■■□□□ 1.63
SEC61A2-213ENST00000475268 ZC3H13Q5T200 1668 aaKnown RBP25.22■■□□□ 1.63
SEC61A2-213ENST00000475268 TESK2Q96S53 571 aa25.21■■□□□ 1.63
SEC61A2-213ENST00000475268 MYOM2P54296 1465 aa25.21■■□□□ 1.63
SEC61A2-213ENST00000475268 ADGRF5Q8IZF2 1346 aa25.2■■□□□ 1.62
SEC61A2-213ENST00000475268 NOS1P29475 1434 aa25.2■■□□□ 1.62
SEC61A2-213ENST00000475268 SIGLEC1Q9BZZ2 1709 aa25.2■■□□□ 1.62
SEC61A2-213ENST00000475268 ARHGAP31Q2M1Z3 1444 aa25.19■■□□□ 1.62
SEC61A2-213ENST00000475268 IFT172Q9UG01 1749 aa25.18■■□□□ 1.62
SEC61A2-213ENST00000475268 CNGB1Q14028 1251 aaPredicted RBP25.18■■□□□ 1.62
SEC61A2-213ENST00000475268 COL17A1Q9UMD9 1497 aaPredicted RBP25.16■■□□□ 1.62
SEC61A2-213ENST00000475268 CCDC184Q52MB2 194 aa25.16■■□□□ 1.62
SEC61A2-213ENST00000475268 CFAP70Q5T0N1 1121 aa25.16■■□□□ 1.62
SEC61A2-213ENST00000475268 IQGAP1P46940 1657 aa25.16■■□□□ 1.62
SEC61A2-213ENST00000475268 DISP3Q9P2K9 1392 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms