RNA–Protein interactions for RNA: ENST00000474906.2

SENP6-206, Transcript of SUMO specific peptidase 6, humanhuman

TSL 3

Gene SENP6, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-206ENST00000474906 PDIA6Q15084 440 aa15.2■□□□□ 0.02
SENP6-206ENST00000474906 DDX12PQ92771 950 aa15.2■□□□□ 0.02
SENP6-206ENST00000474906 E2F4Q16254 413 aa15.19■□□□□ 0.02
SENP6-206ENST00000474906 PROX2Q3B8N5 592 aa15.18■□□□□ 0.02
SENP6-206ENST00000474906 MRPL50Q8N5N7 158 aaKnown RBP15.18■□□□□ 0.02
SENP6-206ENST00000474906 NBPF3Q9H094 633 aa15.18■□□□□ 0.02
SENP6-206ENST00000474906 WDR70Q9NW82 654 aa15.17■□□□□ 0.02
SENP6-206ENST00000474906 C6orf132Q5T0Z8 1188 aa15.16■□□□□ 0.02
SENP6-206ENST00000474906 PLA2G2EQ9NZK7 142 aa15.15■□□□□ 0.02
SENP6-206ENST00000474906 SPDYE16A6NNV3 312 aaPredicted RBP15.14■□□□□ 0.01
SENP6-206ENST00000474906 RABGEF1Q9UJ41 708 aa15.14■□□□□ 0.01
SENP6-206ENST00000474906 GOLGA8CPA6NN73 597 aa15.13■□□□□ 0.01
SENP6-206ENST00000474906 RBM33Q96EV2 1170 aaKnown RBP15.13■□□□□ 0.01
SENP6-206ENST00000474906 ARIH1Q9Y4X5 557 aaPredicted RBP15.13■□□□□ 0.01
SENP6-206ENST00000474906 PTPN5P54829 565 aa15.12■□□□□ 0.01
SENP6-206ENST00000474906 THSD4Q6ZMP0 1018 aa15.12■□□□□ 0.01
SENP6-206ENST00000474906 NBR1Q14596 966 aa15.11■□□□□ 0.01
SENP6-206ENST00000474906 WNT2BQ93097 391 aa15.11■□□□□ 0.01
SENP6-206ENST00000474906 EN1Q05925 392 aaPredicted RBP15.09■□□□□ 0.01
SENP6-206ENST00000474906 MAP3K7O43318 606 aa15.05■□□□□ -0
SENP6-206ENST00000474906 ONECUT3O60422 494 aaPredicted RBP15.05■□□□□ -0
SENP6-206ENST00000474906 TSR1Q2NL82 804 aaKnown RBP15.05■□□□□ -0
SENP6-206ENST00000474906 KIAA1468Q9P260 1216 aa15.05■□□□□ -0
SENP6-206ENST00000474906 TRIM6-TRIM34B2RNG4 842 aa15.03■□□□□ -0
SENP6-206ENST00000474906 LAPTM4BQ86VI4 370 aa15.02■□□□□ -0
SENP6-206ENST00000474906 TSHZ2Q9NRE2 1034 aa15.02■□□□□ -0
SENP6-206ENST00000474906 ANKK1Q8NFD2 765 aa15□□□□□ -0.01
SENP6-206ENST00000474906 GRXCR2A6NFK2 248 aa14.99□□□□□ -0.01
SENP6-206ENST00000474906 PRIM1P49642 420 aaKnown RBP14.99□□□□□ -0.01
SENP6-206ENST00000474906 SEPT9Q9UHD8 586 aaPredicted RBP14.98□□□□□ -0.01
SENP6-206ENST00000474906 ZFRQ96KR1 1074 aaKnown RBP14.96□□□□□ -0.01
SENP6-206ENST00000474906 BCAMP50895 628 aa14.94□□□□□ -0.02
SENP6-206ENST00000474906 TSKSQ9UJT2 592 aa14.94□□□□□ -0.02
SENP6-206ENST00000474906 SOWAHBA6NEL2 793 aa14.93□□□□□ -0.02
SENP6-206ENST00000474906 OSBPP22059 807 aa14.92□□□□□ -0.02
SENP6-206ENST00000474906 FAM98CQ17RN3 349 aaKnown RBP14.92□□□□□ -0.02
SENP6-206ENST00000474906 PACS2Q86VP3 889 aa14.89□□□□□ -0.03
SENP6-206ENST00000474906 CERKQ8TCT0 537 aa14.89□□□□□ -0.03
SENP6-206ENST00000474906 CDCA7LQ96GN5 454 aa14.89□□□□□ -0.03
SENP6-206ENST00000474906 PRSS12P56730 875 aa14.88□□□□□ -0.03
SENP6-206ENST00000474906 CDHR5Q9HBB8 845 aa14.88□□□□□ -0.03
SENP6-206ENST00000474906 IFFO2Q5TF58 517 aa14.87□□□□□ -0.03
SENP6-206ENST00000474906 KCNV2Q8TDN2 545 aa14.86□□□□□ -0.03
SENP6-206ENST00000474906 ARHGEF1Q92888 912 aaKnown RBP14.86□□□□□ -0.03
SENP6-206ENST00000474906 FAM198AQ9UFP1 575 aa14.86□□□□□ -0.03
SENP6-206ENST00000474906 LRCH3Q96II8 777 aa14.82□□□□□ -0.04
SENP6-206ENST00000474906 WBP1LQ9NX94 342 aa14.82□□□□□ -0.04
SENP6-206ENST00000474906 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.82□□□□□ -0.04
SENP6-206ENST00000474906 NYAP1Q6ZVC0 841 aa14.81□□□□□ -0.04
SENP6-206ENST00000474906 SMAPO00193 183 aa14.8□□□□□ -0.04
SENP6-206ENST00000474906 C3orf80F5H4A9 247 aa14.79□□□□□ -0.04
SENP6-206ENST00000474906 RBM27Q9P2N5 1060 aaKnown RBP14.79□□□□□ -0.04
SENP6-206ENST00000474906 NBPF26B4DH59 902 aa14.78□□□□□ -0.04
SENP6-206ENST00000474906 TSR3Q9UJK0 312 aaKnown RBP14.78□□□□□ -0.04
SENP6-206ENST00000474906 ITGBL1O95965 494 aaPredicted RBP14.77□□□□□ -0.05
SENP6-206ENST00000474906 MLLT3P42568 568 aaPredicted RBP14.77□□□□□ -0.05
SENP6-206ENST00000474906 TATDN2Q93075 761 aa14.77□□□□□ -0.05
SENP6-206ENST00000474906 HPS5Q9UPZ3 1129 aa14.77□□□□□ -0.05
SENP6-206ENST00000474906 NPDC1Q9NQX5 325 aaPredicted RBP14.76□□□□□ -0.05
SENP6-206ENST00000474906 PNMA3Q9UL41 463 aa14.76□□□□□ -0.05
SENP6-206ENST00000474906 A0A0G2JS52 829 aa14.75□□□□□ -0.05
SENP6-206ENST00000474906 SAMD7Q7Z3H4 446 aa14.73□□□□□ -0.05
SENP6-206ENST00000474906 PLCB2Q00722 1185 aa14.72□□□□□ -0.05
SENP6-206ENST00000474906 PADI6Q6TGC4 694 aa14.71□□□□□ -0.05
SENP6-206ENST00000474906 NUDT18Q6ZVK8 323 aa14.71□□□□□ -0.05
SENP6-206ENST00000474906 P3H3Q8IVL6 736 aa14.71□□□□□ -0.05
SENP6-206ENST00000474906 TTC13Q8NBP0 860 aa14.71□□□□□ -0.05
SENP6-206ENST00000474906 RGS20O76081 388 aa14.67□□□□□ -0.06
SENP6-206ENST00000474906 PPP4CP60510 307 aa14.67□□□□□ -0.06
SENP6-206ENST00000474906 KCNC4Q03721 635 aa14.64□□□□□ -0.07
SENP6-206ENST00000474906 PTGDRQ13258 359 aa14.61□□□□□ -0.07
SENP6-206ENST00000474906 SEMA3EO15041 775 aa14.59□□□□□ -0.07
SENP6-206ENST00000474906 RNF40O75150 1001 aa14.59□□□□□ -0.07
SENP6-206ENST00000474906 HDGFP51858 240 aaKnown RBP14.58□□□□□ -0.08
SENP6-206ENST00000474906 EYA1Q99502 592 aa14.57□□□□□ -0.08
SENP6-206ENST00000474906 SWT1Q5T5J6 900 aaKnown RBP14.56□□□□□ -0.08
SENP6-206ENST00000474906 NUTM2FA1L443 756 aa14.54□□□□□ -0.08
SENP6-206ENST00000474906 TJAP1Q5JTD0 557 aa14.54□□□□□ -0.08
SENP6-206ENST00000474906 APLP1P51693 650 aa14.51□□□□□ -0.09
SENP6-206ENST00000474906 SLF2Q8IX21 1173 aa14.51□□□□□ -0.09
SENP6-206ENST00000474906 MTRQ99707 1265 aa14.5□□□□□ -0.09
SENP6-206ENST00000474906 NECTIN2Q92692 538 aa14.49□□□□□ -0.09
SENP6-206ENST00000474906 IL21Q9HBE4 155 aa14.48□□□□□ -0.09
SENP6-206ENST00000474906 ADGRG1Q9Y653 693 aa14.48□□□□□ -0.09
SENP6-206ENST00000474906 TESPA1A2RU30 521 aaPredicted RBP14.47□□□□□ -0.09
SENP6-206ENST00000474906 FCHSD2O94868 740 aa14.47□□□□□ -0.09
SENP6-206ENST00000474906 HAP1P54257 671 aaPredicted RBP14.47□□□□□ -0.09
SENP6-206ENST00000474906 RBM46Q8TBY0 533 aaKnown RBP14.46□□□□□ -0.09
SENP6-206ENST00000474906 DNAJB2P25686 324 aa14.45□□□□□ -0.1
SENP6-206ENST00000474906 SLC4A3P48751 1232 aa14.45□□□□□ -0.1
SENP6-206ENST00000474906 FAM161AQ3B820 660 aa14.44□□□□□ -0.1
SENP6-206ENST00000474906 IRX2Q9BZI1 471 aaPredicted RBP14.44□□□□□ -0.1
SENP6-206ENST00000474906 ZNF516Q92618 1163 aa14.42□□□□□ -0.1
SENP6-206ENST00000474906 TMEM134Q9H6X4 195 aa14.42□□□□□ -0.1
SENP6-206ENST00000474906 RBM26Q5T8P6 1007 aaKnown RBP14.4□□□□□ -0.1
SENP6-206ENST00000474906 RCCD1A6NED2 376 aa14.39□□□□□ -0.11
SENP6-206ENST00000474906 SMYD5Q6GMV2 418 aa14.38□□□□□ -0.11
SENP6-206ENST00000474906 COPS2P61201 443 aa14.37□□□□□ -0.11
SENP6-206ENST00000474906 HIC1Q14526 733 aa14.37□□□□□ -0.11
SENP6-206ENST00000474906 KDM2AQ9Y2K7 1162 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms