RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 KANK1Q14678 1352 aa30.5■■■□□ 2.47
CCM2-206ENST00000474617 DHX29Q7Z478 1369 aaKnown RBP30.5■■■□□ 2.47
CCM2-206ENST00000474617 POLR1AO95602 1720 aaPredicted RBP30.5■■■□□ 2.47
CCM2-206ENST00000474617 CCER2I3L3R5 266 aa30.49■■■□□ 2.47
CCM2-206ENST00000474617 KDM5CP41229 1560 aa30.48■■■□□ 2.47
CCM2-206ENST00000474617 ANP32CO43423 234 aa30.48■■■□□ 2.47
CCM2-206ENST00000474617 VWDEQ8N2E2 1590 aa30.47■■■□□ 2.47
CCM2-206ENST00000474617 PLA2R1Q13018 1463 aa30.46■■■□□ 2.47
CCM2-206ENST00000474617 MLH3Q9UHC1 1453 aa30.45■■■□□ 2.47
CCM2-206ENST00000474617 POGZQ7Z3K3 1410 aa30.45■■■□□ 2.47
CCM2-206ENST00000474617 TET3O43151 1660 aa30.45■■■□□ 2.47
CCM2-206ENST00000474617 ARID4BQ4LE39 1312 aaPredicted RBP30.45■■■□□ 2.47
CCM2-206ENST00000474617 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.45■■■□□ 2.47
CCM2-206ENST00000474617 HIRIP3Q9BW71 556 aaPredicted RBP30.45■■■□□ 2.47
CCM2-206ENST00000474617 PRDM15P57071 1507 aaPredicted RBP30.44■■■□□ 2.46
CCM2-206ENST00000474617 GLI2P10070 1586 aa30.43■■■□□ 2.46
CCM2-206ENST00000474617 STAC3Q96MF2 364 aa30.42■■■□□ 2.46
CCM2-206ENST00000474617 KIDINS220Q9ULH0 1771 aa30.41■■■□□ 2.46
CCM2-206ENST00000474617 WASHC2AQ641Q2 1341 aa30.4■■■□□ 2.46
CCM2-206ENST00000474617 TRPM2O94759 1503 aa30.39■■■□□ 2.46
CCM2-206ENST00000474617 CCDC7Q96M83 1385 aa30.39■■■□□ 2.46
CCM2-206ENST00000474617 NEURL4Q96JN8 1562 aa30.38■■■□□ 2.45
CCM2-206ENST00000474617 PTPRTO14522 1441 aa30.38■■■□□ 2.45
CCM2-206ENST00000474617 YTHDC1Q96MU7 727 aaKnown RBP30.37■■■□□ 2.45
CCM2-206ENST00000474617 USP47Q96K76 1375 aa30.37■■■□□ 2.45
CCM2-206ENST00000474617 HECW2Q9P2P5 1572 aa30.36■■■□□ 2.45
CCM2-206ENST00000474617 CNTLNQ9NXG0 1405 aa30.36■■■□□ 2.45
CCM2-206ENST00000474617 BCORL1Q5H9F3 1711 aa30.35■■■□□ 2.45
CCM2-206ENST00000474617 E9PCH4 1651 aa30.35■■■□□ 2.45
CCM2-206ENST00000474617 RNF17Q9BXT8 1623 aaKnown RBP30.35■■■□□ 2.45
CCM2-206ENST00000474617 LMTK2Q8IWU2 1503 aa30.34■■■□□ 2.45
CCM2-206ENST00000474617 LAMC1P11047 1609 aa30.34■■■□□ 2.45
CCM2-206ENST00000474617 MAP3K4Q9Y6R4 1608 aa30.34■■■□□ 2.45
CCM2-206ENST00000474617 A2MP01023 1474 aa30.34■■■□□ 2.45
CCM2-206ENST00000474617 PRAG1Q86YV5 1406 aa30.33■■■□□ 2.45
CCM2-206ENST00000474617 RIMBP3CA6NJZ7 1639 aa30.33■■■□□ 2.45
CCM2-206ENST00000474617 RIMBP3BA6NNM3 1639 aa30.33■■■□□ 2.45
CCM2-206ENST00000474617 RIMBP3Q9UFD9 1639 aa30.33■■■□□ 2.45
CCM2-206ENST00000474617 DCAF11Q8TEB1 546 aa30.32■■■□□ 2.44
CCM2-206ENST00000474617 SPHKAPQ2M3C7 1700 aa30.32■■■□□ 2.44
CCM2-206ENST00000474617 MYT1LQ9UL68 1186 aa30.3■■■□□ 2.44
CCM2-206ENST00000474617 MROH1Q8NDA8 1641 aa30.29■■■□□ 2.44
CCM2-206ENST00000474617 GPRASP1Q5JY77 1395 aa30.27■■■□□ 2.44
CCM2-206ENST00000474617 TRPM1Q7Z4N2 1603 aa30.27■■■□□ 2.44
CCM2-206ENST00000474617 ROCK2O75116 1388 aaKnown RBP30.27■■■□□ 2.44
CCM2-206ENST00000474617 KIF3BO15066 747 aa30.27■■■□□ 2.44
CCM2-206ENST00000474617 CARD11Q9BXL7 1154 aa30.26■■■□□ 2.43
CCM2-206ENST00000474617 CEP152O94986 1710 aa30.26■■■□□ 2.43
CCM2-206ENST00000474617 ZNF326Q5BKZ1 582 aaKnown RBP30.25■■■□□ 2.43
CCM2-206ENST00000474617 EFCAB6Q5THR3 1501 aa30.24■■■□□ 2.43
CCM2-206ENST00000474617 SCAF1Q9H7N4 1312 aaKnown RBP30.23■■■□□ 2.43
CCM2-206ENST00000474617 KIF7Q2M1P5 1343 aa30.22■■■□□ 2.43
CCM2-206ENST00000474617 CYB5RLQ6IPT4 315 aa30.18■■■□□ 2.42
CCM2-206ENST00000474617 KDM2AQ9Y2K7 1162 aa30.18■■■□□ 2.42
CCM2-206ENST00000474617 FRMPD1Q5SYB0 1578 aa30.16■■■□□ 2.42
CCM2-206ENST00000474617 RICTORQ6R327 1708 aa30.15■■■□□ 2.42
CCM2-206ENST00000474617 C11orf95C9JLR9 678 aaPredicted RBP30.15■■■□□ 2.42
CCM2-206ENST00000474617 ABCA6Q8N139 1617 aa30.14■■■□□ 2.42
CCM2-206ENST00000474617 CLTCL1P53675 1640 aa30.14■■■□□ 2.41
CCM2-206ENST00000474617 DIP2BQ9P265 1576 aa30.13■■■□□ 2.41
CCM2-206ENST00000474617 RGL3Q3MIN7 710 aa30.11■■■□□ 2.41
CCM2-206ENST00000474617 ZMYM4Q5VZL5 1548 aa30.09■■■□□ 2.41
CCM2-206ENST00000474617 DIP2CQ9Y2E4 1556 aa30.09■■■□□ 2.41
CCM2-206ENST00000474617 PPRC1Q5VV67 1664 aaKnown RBP30.09■■■□□ 2.41
CCM2-206ENST00000474617 MADDQ8WXG6 1647 aa30.06■■■□□ 2.4
CCM2-206ENST00000474617 KIAA1210Q9ULL0 1709 aa30.06■■■□□ 2.4
CCM2-206ENST00000474617 ZC3H13Q5T200 1668 aaKnown RBP30.06■■■□□ 2.4
CCM2-206ENST00000474617 GTF3C3Q9Y5Q9 886 aa30.06■■■□□ 2.4
CCM2-206ENST00000474617 MYOM2P54296 1465 aa30.04■■■□□ 2.4
CCM2-206ENST00000474617 KIF1BO60333 1816 aa30.03■■■□□ 2.4
CCM2-206ENST00000474617 ABCC3O15438 1527 aa30.02■■■□□ 2.4
CCM2-206ENST00000474617 ST20-MTHFSA0A0A6YYL1 179 aa30.01■■■□□ 2.4
CCM2-206ENST00000474617 PRKRIP1Q9H875 184 aaPredicted RBP30.01■■■□□ 2.39
CCM2-206ENST00000474617 KTN1Q86UP2 1357 aaKnown RBP29.99■■■□□ 2.39
CCM2-206ENST00000474617 ARHGAP31Q2M1Z3 1444 aa29.99■■■□□ 2.39
CCM2-206ENST00000474617 SLC24A1O60721 1099 aa29.97■■■□□ 2.39
CCM2-206ENST00000474617 REREQ9P2R6 1566 aa29.97■■■□□ 2.39
CCM2-206ENST00000474617 RAPGEF3O95398 923 aa29.96■■■□□ 2.39
CCM2-206ENST00000474617 FAM69CQ0P6D2 419 aa29.96■■■□□ 2.39
CCM2-206ENST00000474617 NPATQ14207 1427 aa29.94■■■□□ 2.38
CCM2-206ENST00000474617 CAMSAP1Q5T5Y3 1602 aa29.94■■■□□ 2.38
CCM2-206ENST00000474617 ADGRB3O60242 1522 aa29.94■■■□□ 2.38
CCM2-206ENST00000474617 WASHC2CQ9Y4E1 1318 aa29.93■■■□□ 2.38
CCM2-206ENST00000474617 COL17A1Q9UMD9 1497 aaPredicted RBP29.93■■■□□ 2.38
CCM2-206ENST00000474617 IQGAP1P46940 1657 aa29.91■■■□□ 2.38
CCM2-206ENST00000474617 IFT172Q9UG01 1749 aa29.91■■■□□ 2.38
CCM2-206ENST00000474617 NBPF1Q3BBV0 1214 aa29.91■■■□□ 2.38
CCM2-206ENST00000474617 SCAF11Q99590 1463 aaKnown RBP29.9■■■□□ 2.38
CCM2-206ENST00000474617 RPGRIP1LQ68CZ1 1315 aa29.9■■■□□ 2.38
CCM2-206ENST00000474617 EIF3AQ14152 1382 aaKnown RBP29.89■■■□□ 2.38
CCM2-206ENST00000474617 NRXN1Q9ULB1 1477 aa29.89■■■□□ 2.38
CCM2-206ENST00000474617 PPP6R1Q9UPN7 881 aa29.89■■■□□ 2.38
CCM2-206ENST00000474617 NOS1P29475 1434 aa29.88■■■□□ 2.37
CCM2-206ENST00000474617 GGT6Q6P531 493 aa29.88■■■□□ 2.37
CCM2-206ENST00000474617 AGLP35573 1532 aa29.87■■■□□ 2.37
CCM2-206ENST00000474617 TMF1P82094 1093 aa29.86■■■□□ 2.37
CCM2-206ENST00000474617 CDCA8Q53HL2 280 aa29.84■■■□□ 2.37
CCM2-206ENST00000474617 TESK2Q96S53 571 aa29.83■■■□□ 2.37
CCM2-206ENST00000474617 YEATS2Q9ULM3 1422 aa29.83■■■□□ 2.37
CCM2-206ENST00000474617 PIK3C2BO00750 1634 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms