RNA–Protein interactions for RNA: ENST00000474394.5

RNF220-210, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-210ENST00000474394 ZNF335Q9H4Z2 1342 aaPredicted RBP16.6■□□□□ 0.25
RNF220-210ENST00000474394 FAM50AQ14320 339 aaKnown RBP16.58■□□□□ 0.24
RNF220-210ENST00000474394 PPARGC1BQ86YN6 1023 aaKnown RBP16.58■□□□□ 0.24
RNF220-210ENST00000474394 ABCC5O15440 1437 aa16.58■□□□□ 0.24
RNF220-210ENST00000474394 CAMSAP1Q5T5Y3 1602 aa16.58■□□□□ 0.24
RNF220-210ENST00000474394 SHANK2Q9UPX8 1470 aa16.57■□□□□ 0.24
RNF220-210ENST00000474394 DAPK1P53355 1430 aa16.57■□□□□ 0.24
RNF220-210ENST00000474394 GGT6Q6P531 493 aa16.57■□□□□ 0.24
RNF220-210ENST00000474394 DNMT1P26358 1616 aaKnown RBP16.56■□□□□ 0.24
RNF220-210ENST00000474394 CNTLNQ9NXG0 1405 aa16.56■□□□□ 0.24
RNF220-210ENST00000474394 NCKAP5LQ9HCH0 1330 aa16.56■□□□□ 0.24
RNF220-210ENST00000474394 HSPA1LP34931 641 aa16.56■□□□□ 0.24
RNF220-210ENST00000474394 KIF3BO15066 747 aa16.55■□□□□ 0.24
RNF220-210ENST00000474394 PPP6R1Q9UPN7 881 aa16.55■□□□□ 0.24
RNF220-210ENST00000474394 CROCC2H7BZ55 1655 aa16.54■□□□□ 0.24
RNF220-210ENST00000474394 SCAF1Q9H7N4 1312 aaKnown RBP16.53■□□□□ 0.24
RNF220-210ENST00000474394 PHF23Q9BUL5 403 aaPredicted RBP16.52■□□□□ 0.24
RNF220-210ENST00000474394 PIP4K2BP78356 416 aa16.51■□□□□ 0.23
RNF220-210ENST00000474394 PKD2Q13563 968 aa16.51■□□□□ 0.23
RNF220-210ENST00000474394 ANKRD30AQ9BXX3 1397 aa16.51■□□□□ 0.23
RNF220-210ENST00000474394 KIF15Q9NS87 1388 aa16.51■□□□□ 0.23
RNF220-210ENST00000474394 DUOX2Q9NRD8 1548 aa16.5■□□□□ 0.23
RNF220-210ENST00000474394 RRP7BPQ9NSQ0 103 aa16.5■□□□□ 0.23
RNF220-210ENST00000474394 CHIC2Q9UKJ5 165 aa16.5■□□□□ 0.23
RNF220-210ENST00000474394 TOM1O60784 492 aa16.49■□□□□ 0.23
RNF220-210ENST00000474394 MROH2AA6NES4 1674 aa16.49■□□□□ 0.23
RNF220-210ENST00000474394 ZMYM3Q14202 1370 aa16.49■□□□□ 0.23
RNF220-210ENST00000474394 NPATQ14207 1427 aa16.48■□□□□ 0.23
RNF220-210ENST00000474394 CLTCQ00610 1675 aaKnown RBP16.47■□□□□ 0.23
RNF220-210ENST00000474394 EIF2AK4Q9P2K8 1649 aaKnown RBP16.47■□□□□ 0.23
RNF220-210ENST00000474394 FAM135AQ9P2D6 1515 aa16.46■□□□□ 0.23
RNF220-210ENST00000474394 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.46■□□□□ 0.23
RNF220-210ENST00000474394 WASHC2CQ9Y4E1 1318 aa16.45■□□□□ 0.22
RNF220-210ENST00000474394 ERBINQ96RT1 1412 aa16.45■□□□□ 0.22
RNF220-210ENST00000474394 ADGRL2O95490 1459 aa16.45■□□□□ 0.22
RNF220-210ENST00000474394 PLA2R1Q13018 1463 aa16.45■□□□□ 0.22
RNF220-210ENST00000474394 RNF17Q9BXT8 1623 aaKnown RBP16.44■□□□□ 0.22
RNF220-210ENST00000474394 KDM5DQ9BY66 1539 aa16.44■□□□□ 0.22
RNF220-210ENST00000474394 RRBP1Q9P2E9 1410 aaKnown RBP16.42■□□□□ 0.22
RNF220-210ENST00000474394 ZNF142P52746 1687 aaPredicted RBP16.41■□□□□ 0.22
RNF220-210ENST00000474394 ITGAEP38570 1179 aa16.41■□□□□ 0.22
RNF220-210ENST00000474394 PTPRKQ15262 1439 aa16.41■□□□□ 0.22
RNF220-210ENST00000474394 ROCK1Q13464 1354 aa16.38■□□□□ 0.21
RNF220-210ENST00000474394 MROH1Q8NDA8 1641 aa16.38■□□□□ 0.21
RNF220-210ENST00000474394 MYO3AQ8NEV4 1616 aa16.38■□□□□ 0.21
RNF220-210ENST00000474394 CEP170BQ9Y4F5 1589 aaPredicted RBP16.38■□□□□ 0.21
RNF220-210ENST00000474394 ANKRD50Q9ULJ7 1429 aa16.37■□□□□ 0.21
RNF220-210ENST00000474394 ZC3H13Q5T200 1668 aaKnown RBP16.37■□□□□ 0.21
RNF220-210ENST00000474394 PZPP20742 1482 aa16.37■□□□□ 0.21
RNF220-210ENST00000474394 ABCC3O15438 1527 aa16.37■□□□□ 0.21
RNF220-210ENST00000474394 CPS1P31327 1500 aa16.37■□□□□ 0.21
RNF220-210ENST00000474394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.37■□□□□ 0.211e-8■□□□□ 11.1
RNF220-210ENST00000474394 KANK1Q14678 1352 aa16.37■□□□□ 0.21
RNF220-210ENST00000474394 PRDM15P57071 1507 aaPredicted RBP16.36■□□□□ 0.21
RNF220-210ENST00000474394 DEPDC5O75140 1603 aa16.34■□□□□ 0.21
RNF220-210ENST00000474394 FBXO31Q5XUX0 539 aaPredicted RBP16.34■□□□□ 0.21
RNF220-210ENST00000474394 TNRQ92752 1358 aa16.33■□□□□ 0.2
RNF220-210ENST00000474394 CEP152O94986 1710 aa16.33■□□□□ 0.2
RNF220-210ENST00000474394 RGS17Q9UGC6 210 aaPredicted RBP16.31■□□□□ 0.2
RNF220-210ENST00000474394 ARHGAP31Q2M1Z3 1444 aa16.29■□□□□ 0.2
RNF220-210ENST00000474394 POLR1AO95602 1720 aaPredicted RBP16.29■□□□□ 0.2
RNF220-210ENST00000474394 VWDEQ8N2E2 1590 aa16.29■□□□□ 0.2
RNF220-210ENST00000474394 ALKQ9UM73 1620 aa16.28■□□□□ 0.2
RNF220-210ENST00000474394 SENP3Q9H4L4 574 aaPredicted RBP16.28■□□□□ 0.2
RNF220-210ENST00000474394 LMTK2Q8IWU2 1503 aa16.28■□□□□ 0.2
RNF220-210ENST00000474394 A2ML1A8K2U0 1454 aa16.28■□□□□ 0.2
RNF220-210ENST00000474394 ERVK-7P63135 1459 aa16.27■□□□□ 0.19
RNF220-210ENST00000474394 NLRP1Q9C000 1473 aa16.26■□□□□ 0.19
RNF220-210ENST00000474394 UNC13BO14795 1591 aa16.25■□□□□ 0.19
RNF220-210ENST00000474394 CFAP65Q6ZU64 1925 aaKnown RBP16.25■□□□□ 0.19
RNF220-210ENST00000474394 NEURL4Q96JN8 1562 aa16.25■□□□□ 0.19
RNF220-210ENST00000474394 ANKLE2Q86XL3 938 aa16.22■□□□□ 0.19
RNF220-210ENST00000474394 EFCAB6Q5THR3 1501 aa16.22■□□□□ 0.19
RNF220-210ENST00000474394 NAIPQ13075 1403 aa16.21■□□□□ 0.19
RNF220-210ENST00000474394 THEMISQ8N1K5 641 aaPredicted RBP16.21■□□□□ 0.19
RNF220-210ENST00000474394 NUP155O75694 1391 aa16.21■□□□□ 0.19
RNF220-210ENST00000474394 RPRD2Q5VT52 1461 aaKnown RBP16.2■□□□□ 0.18
RNF220-210ENST00000474394 UGGT1Q9NYU2 1555 aa16.2■□□□□ 0.18
RNF220-210ENST00000474394 TET3O43151 1660 aa16.2■□□□□ 0.18
RNF220-210ENST00000474394 HFM1A2PYH4 1435 aa16.19■□□□□ 0.18
RNF220-210ENST00000474394 GCC2Q8IWJ2 1684 aa16.19■□□□□ 0.18
RNF220-210ENST00000474394 POTEAQ6S8J7 498 aa16.18■□□□□ 0.18
RNF220-210ENST00000474394 IQGAP3Q86VI3 1631 aa16.18■□□□□ 0.18
RNF220-210ENST00000474394 NOS1P29475 1434 aa16.17■□□□□ 0.18
RNF220-210ENST00000474394 STAG3Q9UJ98 1225 aa16.15■□□□□ 0.18
RNF220-210ENST00000474394 MED14O60244 1454 aa16.15■□□□□ 0.18
RNF220-210ENST00000474394 LRRC7Q96NW7 1537 aa16.14■□□□□ 0.18
RNF220-210ENST00000474394 NPHP4O75161 1426 aaPredicted RBP16.14■□□□□ 0.17
RNF220-210ENST00000474394 STRCP1A6NGW2 1772 aa16.14■□□□□ 0.17
RNF220-210ENST00000474394 IDI1Q13907 227 aa16.14■□□□□ 0.17
RNF220-210ENST00000474394 SLC52A1Q9NWF4 448 aa16.14■□□□□ 0.17
RNF220-210ENST00000474394 SYNMO15061 1565 aa16.13■□□□□ 0.17
RNF220-210ENST00000474394 TRIM52Q96A61 297 aa16.13■□□□□ 0.17
RNF220-210ENST00000474394 E9PCH4 1651 aa16.12■□□□□ 0.17
RNF220-210ENST00000474394 UBR1Q8IWV7 1749 aa16.12■□□□□ 0.17
RNF220-210ENST00000474394 IQGAP1P46940 1657 aa16.11■□□□□ 0.17
RNF220-210ENST00000474394 PIK3C2BO00750 1634 aa16.11■□□□□ 0.17
RNF220-210ENST00000474394 KDM5AP29375 1690 aaKnown RBP16.08■□□□□ 0.16
RNF220-210ENST00000474394 EID1Q9Y6B2 187 aa16.07■□□□□ 0.16
RNF220-210ENST00000474394 ACIN1Q9UKV3 1341 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms