RNA–Protein interactions for RNA: ENST00000474273.5

SSB-210, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-210ENST00000474273 PROX2Q3B8N5 592 aa12.83□□□□□ -0.36
SSB-210ENST00000474273 A0A0G2JS52 829 aa12.81□□□□□ -0.36
SSB-210ENST00000474273 CAMK2BQ13554 666 aa12.8□□□□□ -0.36
SSB-210ENST00000474273 ANKK1Q8NFD2 765 aa12.8□□□□□ -0.36
SSB-210ENST00000474273 LAPTM4BQ86VI4 370 aa12.78□□□□□ -0.36
SSB-210ENST00000474273 EPAS1Q99814 870 aa12.77□□□□□ -0.37
SSB-210ENST00000474273 ONECUT3O60422 494 aaPredicted RBP12.75□□□□□ -0.37
SSB-210ENST00000474273 DPYSL4O14531 572 aa12.74□□□□□ -0.37
SSB-210ENST00000474273 C6orf132Q5T0Z8 1188 aa12.74□□□□□ -0.37
SSB-210ENST00000474273 KIAA1468Q9P260 1216 aa12.73□□□□□ -0.37
SSB-210ENST00000474273 SOWAHBA6NEL2 793 aa12.72□□□□□ -0.37
SSB-210ENST00000474273 ITGBL1O95965 494 aaPredicted RBP12.72□□□□□ -0.37
SSB-210ENST00000474273 BCAMP50895 628 aa12.72□□□□□ -0.37
SSB-210ENST00000474273 ZFRQ96KR1 1074 aaKnown RBP12.71□□□□□ -0.37
SSB-210ENST00000474273 NYAP1Q6ZVC0 841 aa12.69□□□□□ -0.38
SSB-210ENST00000474273 IRX2Q9BZI1 471 aaPredicted RBP12.68□□□□□ -0.38
SSB-210ENST00000474273 TRIM6-TRIM34B2RNG4 842 aa12.67□□□□□ -0.38
SSB-210ENST00000474273 SEPT9Q9UHD8 586 aaPredicted RBP12.66□□□□□ -0.38
SSB-210ENST00000474273 RBM33Q96EV2 1170 aaKnown RBP12.65□□□□□ -0.38
SSB-210ENST00000474273 FAM98CQ17RN3 349 aaKnown RBP12.64□□□□□ -0.39
SSB-210ENST00000474273 DDX12PQ92771 950 aa12.64□□□□□ -0.39
SSB-210ENST00000474273 WBP1LQ9NX94 342 aa12.64□□□□□ -0.39
SSB-210ENST00000474273 BBXQ8WY36 941 aaPredicted RBP12.61□□□□□ -0.39
SSB-210ENST00000474273 EN1Q05925 392 aaPredicted RBP12.6□□□□□ -0.39
SSB-210ENST00000474273 PDIA6Q15084 440 aa12.6□□□□□ -0.39
SSB-210ENST00000474273 KCNC4Q03721 635 aa12.58□□□□□ -0.4
SSB-210ENST00000474273 NBR1Q14596 966 aa12.58□□□□□ -0.4
SSB-210ENST00000474273 LRCH3Q96II8 777 aa12.58□□□□□ -0.4
SSB-210ENST00000474273 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.58□□□□□ -0.4
SSB-210ENST00000474273 TSR3Q9UJK0 312 aaKnown RBP12.58□□□□□ -0.4
SSB-210ENST00000474273 MAP3K7O43318 606 aa12.56□□□□□ -0.4
SSB-210ENST00000474273 TSR1Q2NL82 804 aaKnown RBP12.56□□□□□ -0.4
SSB-210ENST00000474273 HPS5Q9UPZ3 1129 aa12.56□□□□□ -0.4
SSB-210ENST00000474273 SPDYE16A6NNV3 312 aaPredicted RBP12.55□□□□□ -0.4
SSB-210ENST00000474273 PACS2Q86VP3 889 aa12.55□□□□□ -0.4
SSB-210ENST00000474273 TSKSQ9UJT2 592 aa12.55□□□□□ -0.4
SSB-210ENST00000474273 SPRYD3Q8NCJ5 442 aa12.49□□□□□ -0.41
SSB-210ENST00000474273 CDCA7LQ96GN5 454 aa12.48□□□□□ -0.41
SSB-210ENST00000474273 PRSS12P56730 875 aa12.47□□□□□ -0.41
SSB-210ENST00000474273 CERKQ8TCT0 537 aa12.47□□□□□ -0.41
SSB-210ENST00000474273 ARIH1Q9Y4X5 557 aaPredicted RBP12.47□□□□□ -0.41
SSB-210ENST00000474273 PPP4CP60510 307 aa12.46□□□□□ -0.41
SSB-210ENST00000474273 E2F4Q16254 413 aa12.46□□□□□ -0.41
SSB-210ENST00000474273 FAM198AQ9UFP1 575 aa12.45□□□□□ -0.42
SSB-210ENST00000474273 PRIM1P49642 420 aaKnown RBP12.44□□□□□ -0.42
SSB-210ENST00000474273 SMAPO00193 183 aa12.43□□□□□ -0.42
SSB-210ENST00000474273 SAMD7Q7Z3H4 446 aa12.43□□□□□ -0.42
SSB-210ENST00000474273 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.43□□□□□ -0.42
SSB-210ENST00000474273 GRXCR2A6NFK2 248 aa12.41□□□□□ -0.42
SSB-210ENST00000474273 NBPF26B4DH59 902 aa12.41□□□□□ -0.42
SSB-210ENST00000474273 TJAP1Q5JTD0 557 aa12.4□□□□□ -0.42
SSB-210ENST00000474273 Q6ZNB5 142 aa12.4□□□□□ -0.42
SSB-210ENST00000474273 TATDN2Q93075 761 aa12.4□□□□□ -0.42
SSB-210ENST00000474273 C3orf80F5H4A9 247 aa12.39□□□□□ -0.43
SSB-210ENST00000474273 PNMA3Q9UL41 463 aa12.39□□□□□ -0.43
SSB-210ENST00000474273 WDR70Q9NW82 654 aa12.38□□□□□ -0.43
SSB-210ENST00000474273 OSBPP22059 807 aa12.37□□□□□ -0.43
SSB-210ENST00000474273 CDHR5Q9HBB8 845 aa12.36□□□□□ -0.43
SSB-210ENST00000474273 RBM27Q9P2N5 1060 aaKnown RBP12.36□□□□□ -0.43
SSB-210ENST00000474273 LAPTM4AQ15012 233 aa12.35□□□□□ -0.43
SSB-210ENST00000474273 MTRQ99707 1265 aa12.34□□□□□ -0.43
SSB-210ENST00000474273 IL21Q9HBE4 155 aa12.34□□□□□ -0.43
SSB-210ENST00000474273 NUDT18Q6ZVK8 323 aa12.32□□□□□ -0.44
SSB-210ENST00000474273 HDGFP51858 240 aaKnown RBP12.31□□□□□ -0.44
SSB-210ENST00000474273 PAXIP1Q6ZW49 1069 aaPredicted RBP12.31□□□□□ -0.44
SSB-210ENST00000474273 CFAP44Q96MT7 982 aa12.3□□□□□ -0.44
SSB-210ENST00000474273 RNF40O75150 1001 aa12.29□□□□□ -0.44
SSB-210ENST00000474273 TTC13Q8NBP0 860 aa12.29□□□□□ -0.44
SSB-210ENST00000474273 APLP1P51693 650 aa12.28□□□□□ -0.44
SSB-210ENST00000474273 PPP1R18Q6NYC8 613 aa12.28□□□□□ -0.44
SSB-210ENST00000474273 PRKD2Q9BZL6 878 aa12.28□□□□□ -0.44
SSB-210ENST00000474273 GFRA3O60609 400 aa12.27□□□□□ -0.45
SSB-210ENST00000474273 ZNF516Q92618 1163 aa12.26□□□□□ -0.45
SSB-210ENST00000474273 NECTIN2Q92692 538 aa12.26□□□□□ -0.45
SSB-210ENST00000474273 NPDC1Q9NQX5 325 aaPredicted RBP12.26□□□□□ -0.45
SSB-210ENST00000474273 AMER1Q5JTC6 1135 aaPredicted RBP12.25□□□□□ -0.45
SSB-210ENST00000474273 V9GY48 417 aaPredicted RBP12.25□□□□□ -0.45
SSB-210ENST00000474273 PADI6Q6TGC4 694 aa12.24□□□□□ -0.45
SSB-210ENST00000474273 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.24□□□□□ -0.45
SSB-210ENST00000474273 SWT1Q5T5J6 900 aaKnown RBP12.23□□□□□ -0.45
SSB-210ENST00000474273 SLF2Q8IX21 1173 aa12.23□□□□□ -0.45
SSB-210ENST00000474273 LCE2BO14633 110 aa12.22□□□□□ -0.45
SSB-210ENST00000474273 TRAF7Q6Q0C0 670 aa12.21□□□□□ -0.45
SSB-210ENST00000474273 NRG2O14511 850 aaPredicted RBP12.2□□□□□ -0.46
SSB-210ENST00000474273 NKX2-3Q8TAU0 364 aa12.18□□□□□ -0.46
SSB-210ENST00000474273 EYA1Q99502 592 aa12.17□□□□□ -0.46
SSB-210ENST00000474273 SLC4A3P48751 1232 aa12.16□□□□□ -0.46
SSB-210ENST00000474273 COPS2P61201 443 aa12.16□□□□□ -0.46
SSB-210ENST00000474273 GGCXP38435 758 aa12.15□□□□□ -0.46
SSB-210ENST00000474273 RTN4Q9NQC3 1192 aaKnown RBP12.14□□□□□ -0.47
SSB-210ENST00000474273 TMUB1Q9BVT8 246 aa12.13□□□□□ -0.47
SSB-210ENST00000474273 PRR14Q9BWN1 585 aa12.13□□□□□ -0.47
SSB-210ENST00000474273 ZPR1O75312 459 aa12.12□□□□□ -0.47
SSB-210ENST00000474273 ARHGEF1Q92888 912 aaKnown RBP12.11□□□□□ -0.47
SSB-210ENST00000474273 MLLT3P42568 568 aaPredicted RBP12.1□□□□□ -0.47
SSB-210ENST00000474273 PDZRN3Q9UPQ7 1066 aa12.09□□□□□ -0.47
SSB-210ENST00000474273 PCDHB3Q9Y5E6 796 aa12.08□□□□□ -0.48
SSB-210ENST00000474273 DNAJB2P25686 324 aa12.07□□□□□ -0.48
SSB-210ENST00000474273 PTGDRQ13258 359 aa12.07□□□□□ -0.48
SSB-210ENST00000474273 BLOC1S3Q6QNY0 202 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms