RNA–Protein interactions for RNA: ENST00000474082.1

FAM3C-204, Transcript of family with sequence similarity 3 member C, humanhuman

TSL 2

Gene FAM3C, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3C-204ENST00000474082 FBXW7Q969H0 707 aa13.03□□□□□ -0.32
FAM3C-204ENST00000474082 GPR153Q6NV75 609 aa13.02□□□□□ -0.33
FAM3C-204ENST00000474082 ZSWIM6Q9HCJ5 1215 aa13.02□□□□□ -0.33
FAM3C-204ENST00000474082 AMHR2Q16671 573 aa13.01□□□□□ -0.33
FAM3C-204ENST00000474082 RIMBP2O15034 1052 aa13□□□□□ -0.33
FAM3C-204ENST00000474082 ZNF454Q8N9F8 522 aa12.98□□□□□ -0.33
FAM3C-204ENST00000474082 ZDHHC16Q969W1 377 aa12.97□□□□□ -0.33
FAM3C-204ENST00000474082 PARP9Q8IXQ6 854 aa12.96□□□□□ -0.33
FAM3C-204ENST00000474082 IL27Q8NEV9 243 aa12.96□□□□□ -0.33
FAM3C-204ENST00000474082 TIMELESSQ9UNS1 1208 aa12.96□□□□□ -0.33
FAM3C-204ENST00000474082 C6orf132Q5T0Z8 1188 aa12.95□□□□□ -0.34
FAM3C-204ENST00000474082 ZNF710Q8N1W2 664 aa12.95□□□□□ -0.34
FAM3C-204ENST00000474082 ADAM33Q9BZ11 813 aa12.93□□□□□ -0.34
FAM3C-204ENST00000474082 DAXXQ9UER7 740 aaPredicted RBP12.92□□□□□ -0.34
FAM3C-204ENST00000474082 LHX6Q9UPM6 363 aa12.92□□□□□ -0.34
FAM3C-204ENST00000474082 CERKQ8TCT0 537 aa12.91□□□□□ -0.34
FAM3C-204ENST00000474082 FAM117AQ9C073 453 aa12.91□□□□□ -0.34
FAM3C-204ENST00000474082 TTLL12Q14166 644 aaPredicted RBP12.89□□□□□ -0.35
FAM3C-204ENST00000474082 PADI6Q6TGC4 694 aa12.88□□□□□ -0.35
FAM3C-204ENST00000474082 PHOX2BQ99453 314 aa12.88□□□□□ -0.35
FAM3C-204ENST00000474082 SNPHO15079 494 aa12.86□□□□□ -0.35
FAM3C-204ENST00000474082 FAM161AQ3B820 660 aa12.86□□□□□ -0.35
FAM3C-204ENST00000474082 REPIN1Q9BWE0 567 aaKnown RBP12.86□□□□□ -0.35
FAM3C-204ENST00000474082 PLEKHG3A1L390 1219 aa12.85□□□□□ -0.35
FAM3C-204ENST00000474082 PPP4R3BQ5MIZ7 849 aa12.85□□□□□ -0.35
FAM3C-204ENST00000474082 GIGYF2Q6Y7W6 1299 aaKnown RBP12.85□□□□□ -0.35
FAM3C-204ENST00000474082 TTC13Q8NBP0 860 aa12.85□□□□□ -0.35
FAM3C-204ENST00000474082 RBM27Q9P2N5 1060 aaKnown RBP12.85□□□□□ -0.35
FAM3C-204ENST00000474082 HOXB1P14653 301 aaPredicted RBP12.84□□□□□ -0.35
FAM3C-204ENST00000474082 OTUD5Q96G74 571 aa12.84□□□□□ -0.35
FAM3C-204ENST00000474082 DDRGK1Q96HY6 314 aa12.84□□□□□ -0.35
FAM3C-204ENST00000474082 TMUB1Q9BVT8 246 aa12.84□□□□□ -0.35
FAM3C-204ENST00000474082 PSDA5PKW4 1024 aaPredicted RBP12.83□□□□□ -0.36
FAM3C-204ENST00000474082 ADGRG1Q9Y653 693 aa12.83□□□□□ -0.36
FAM3C-204ENST00000474082 METTL3Q86U44 580 aaKnown RBP12.82□□□□□ -0.36
FAM3C-204ENST00000474082 MS4A1P11836 297 aa12.81□□□□□ -0.36
FAM3C-204ENST00000474082 PRSS12P56730 875 aa12.81□□□□□ -0.36
FAM3C-204ENST00000474082 ERICH6Q7L0X2 663 aa12.81□□□□□ -0.36
FAM3C-204ENST00000474082 BCL2L12Q9HB09 334 aa12.81□□□□□ -0.36
FAM3C-204ENST00000474082 OATP04181 439 aa12.8□□□□□ -0.36
FAM3C-204ENST00000474082 COL9A1P20849 921 aa12.8□□□□□ -0.36
FAM3C-204ENST00000474082 CLCN1P35523 988 aa12.8□□□□□ -0.36
FAM3C-204ENST00000474082 MDM2Q00987 491 aaPredicted RBP12.8□□□□□ -0.36
FAM3C-204ENST00000474082 CDCA7LQ96GN5 454 aa12.8□□□□□ -0.36
FAM3C-204ENST00000474082 PXYLP1Q8TE99 480 aa12.79□□□□□ -0.36
FAM3C-204ENST00000474082 GPCPD1Q9NPB8 672 aa12.79□□□□□ -0.36
FAM3C-204ENST00000474082 FAM198AQ9UFP1 575 aa12.77□□□□□ -0.37
FAM3C-204ENST00000474082 NLRP7Q8WX94 980 aa12.76□□□□□ -0.37
FAM3C-204ENST00000474082 PPP1R3GB7ZBB8 358 aa12.75□□□□□ -0.37
FAM3C-204ENST00000474082 PTPREP23469 700 aa12.75□□□□□ -0.37
FAM3C-204ENST00000474082 C14orf37Q86TY3 774 aa12.75□□□□□ -0.37
FAM3C-204ENST00000474082 TSKSQ9UJT2 592 aa12.73□□□□□ -0.37
FAM3C-204ENST00000474082 SSTR3P32745 418 aaPredicted RBP12.72□□□□□ -0.37
FAM3C-204ENST00000474082 FAM217BQ9NTX9 383 aaPredicted RBP12.72□□□□□ -0.37
FAM3C-204ENST00000474082 LHX8Q68G74 356 aa12.71□□□□□ -0.37
FAM3C-204ENST00000474082 RBM46Q8TBY0 533 aaKnown RBP12.71□□□□□ -0.37
FAM3C-204ENST00000474082 EYA1Q99502 592 aa12.69□□□□□ -0.38
FAM3C-204ENST00000474082 GOPCQ9HD26 462 aa12.69□□□□□ -0.38
FAM3C-204ENST00000474082 C3orf80F5H4A9 247 aa12.68□□□□□ -0.38
FAM3C-204ENST00000474082 TRIM6-TRIM34B2RNG4 842 aa12.67□□□□□ -0.38
FAM3C-204ENST00000474082 KCNK17Q96T54 332 aa12.67□□□□□ -0.38
FAM3C-204ENST00000474082 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.65□□□□□ -0.38
FAM3C-204ENST00000474082 RCCD1A6NED2 376 aa12.65□□□□□ -0.38
FAM3C-204ENST00000474082 NUDT18Q6ZVK8 323 aa12.65□□□□□ -0.38
FAM3C-204ENST00000474082 BEGAINQ9BUH8 593 aa12.65□□□□□ -0.38
FAM3C-204ENST00000474082 PROX2Q3B8N5 592 aa12.64□□□□□ -0.39
FAM3C-204ENST00000474082 TATDN2Q93075 761 aa12.63□□□□□ -0.39
FAM3C-204ENST00000474082 NBPF26B4DH59 902 aa12.62□□□□□ -0.39
FAM3C-204ENST00000474082 SH3D19Q5HYK7 790 aa12.62□□□□□ -0.39
FAM3C-204ENST00000474082 PNMA3Q9UL41 463 aa12.62□□□□□ -0.39
FAM3C-204ENST00000474082 PACS2Q86VP3 889 aa12.61□□□□□ -0.39
FAM3C-204ENST00000474082 ST18O60284 1047 aa12.6□□□□□ -0.39
FAM3C-204ENST00000474082 ONECUT3O60422 494 aaPredicted RBP12.6□□□□□ -0.39
FAM3C-204ENST00000474082 VARS2Q5ST30 1063 aaKnown RBP12.6□□□□□ -0.39
FAM3C-204ENST00000474082 ERBB3P21860 1342 aa12.6□□□□□ -0.39
FAM3C-204ENST00000474082 PSEN2P49810 448 aa12.59□□□□□ -0.39
FAM3C-204ENST00000474082 POTEEQ6S8J3 1075 aa12.59□□□□□ -0.39
FAM3C-204ENST00000474082 KCNH8Q96L42 1107 aa12.59□□□□□ -0.39
FAM3C-204ENST00000474082 PCMTD1Q96MG8 357 aaPredicted RBP12.59□□□□□ -0.39
FAM3C-204ENST00000474082 ZBED2Q9BTP6 218 aa12.59□□□□□ -0.39
FAM3C-204ENST00000474082 DNAJB2P25686 324 aa12.58□□□□□ -0.4
FAM3C-204ENST00000474082 RSPH6AQ9H0K4 717 aa12.58□□□□□ -0.4
FAM3C-204ENST00000474082 SMAPO00193 183 aa12.57□□□□□ -0.4
FAM3C-204ENST00000474082 SKIV2LQ15477 1246 aaKnown RBP12.57□□□□□ -0.4
FAM3C-204ENST00000474082 TMEM134Q9H6X4 195 aa12.56□□□□□ -0.4
FAM3C-204ENST00000474082 ARHGAP33O14559 1287 aa12.55□□□□□ -0.4
FAM3C-204ENST00000474082 KIAA1468Q9P260 1216 aa12.55□□□□□ -0.4
FAM3C-204ENST00000474082 CD46P15529 392 aa12.54□□□□□ -0.4
FAM3C-204ENST00000474082 MYSM1Q5VVJ2 828 aa12.54□□□□□ -0.4
FAM3C-204ENST00000474082 EMP3P54852 163 aa12.53□□□□□ -0.4
FAM3C-204ENST00000474082 DMRTA1Q5VZB9 504 aa12.53□□□□□ -0.4
FAM3C-204ENST00000474082 MARVELD3Q96A59 401 aa12.53□□□□□ -0.4
FAM3C-204ENST00000474082 AXIN2Q9Y2T1 843 aa12.53□□□□□ -0.4
FAM3C-204ENST00000474082 SULF1Q8IWU6 871 aa12.52□□□□□ -0.41
FAM3C-204ENST00000474082 SLC4A5Q9BY07 1137 aa12.52□□□□□ -0.41
FAM3C-204ENST00000474082 TBC1D2Q9BYX2 928 aa12.52□□□□□ -0.41
FAM3C-204ENST00000474082 POLR3EQ9NVU0 708 aa12.52□□□□□ -0.41
FAM3C-204ENST00000474082 PROCA1Q8NCQ7 364 aaPredicted RBP12.51□□□□□ -0.41
FAM3C-204ENST00000474082 DDX11L8A8MPP1 907 aa12.5□□□□□ -0.41
FAM3C-204ENST00000474082 RABGEF1Q9UJ41 708 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms