RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	PHF14	O94880	888 aa		11.39	□□□□□ -0.59
BBX-223	ENST00000473542	TYW1B	Q6NUM6	668 aa		11.39	□□□□□ -0.59
BBX-223	ENST00000473542	CAMK2B	Q13554	666 aa		11.38	□□□□□ -0.59
BBX-223	ENST00000473542	RABGEF1	Q9UJ41	708 aa		11.37	□□□□□ -0.59
BBX-223	ENST00000473542	FBXW7	Q969H0	707 aa		11.35	□□□□□ -0.59
BBX-223	ENST00000473542	BCAM	P50895	628 aa		11.34	□□□□□ -0.59
BBX-223	ENST00000473542	IFFO2	Q5TF58	517 aa		11.34	□□□□□ -0.59
BBX-223	ENST00000473542	KIAA1468	Q9P260	1216 aa		11.33	□□□□□ -0.6
BBX-223	ENST00000473542		A0A0G2JS52	829 aa		11.32	□□□□□ -0.6
BBX-223	ENST00000473542	C6orf132	Q5T0Z8	1188 aa		11.32	□□□□□ -0.6
BBX-223	ENST00000473542	ANKK1	Q8NFD2	765 aa		11.31	□□□□□ -0.6
BBX-223	ENST00000473542	DDX12P	Q92771	950 aa		11.31	□□□□□ -0.6
BBX-223	ENST00000473542	RBM33	Q96EV2	1170 aa	Known RBP	11.31	□□□□□ -0.6
BBX-223	ENST00000473542	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.31	□□□□□ -0.6
BBX-223	ENST00000473542	EPAS1	Q99814	870 aa		11.29	□□□□□ -0.6
BBX-223	ENST00000473542	BBX	Q8WY36	941 aa	Predicted RBP	11.28	□□□□□ -0.6
BBX-223	ENST00000473542	ZFR	Q96KR1	1074 aa	Known RBP	11.28	□□□□□ -0.6
BBX-223	ENST00000473542	SOWAHB	A6NEL2	793 aa		11.27	□□□□□ -0.61
BBX-223	ENST00000473542	LAPTM4B	Q86VI4	370 aa		11.26	□□□□□ -0.61
BBX-223	ENST00000473542	TRIM6-TRIM34	B2RNG4	842 aa		11.25	□□□□□ -0.61
BBX-223	ENST00000473542	WBP1L	Q9NX94	342 aa		11.25	□□□□□ -0.61
BBX-223	ENST00000473542	TSR1	Q2NL82	804 aa	Known RBP	11.24	□□□□□ -0.61
BBX-223	ENST00000473542	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.24	□□□□□ -0.61
BBX-223	ENST00000473542	ITGBL1	O95965	494 aa	Predicted RBP	11.23	□□□□□ -0.61
BBX-223	ENST00000473542	ONECUT3	O60422	494 aa	Predicted RBP	11.22	□□□□□ -0.61
BBX-223	ENST00000473542	RGS20	O76081	388 aa		11.22	□□□□□ -0.61
BBX-223	ENST00000473542	NBR1	Q14596	966 aa		11.22	□□□□□ -0.61
BBX-223	ENST00000473542	EN1	Q05925	392 aa	Predicted RBP	11.2	□□□□□ -0.62
BBX-223	ENST00000473542	TSKS	Q9UJT2	592 aa		11.2	□□□□□ -0.62
BBX-223	ENST00000473542	PRIM1	P49642	420 aa	Known RBP	11.19	□□□□□ -0.62
BBX-223	ENST00000473542	PDIA6	Q15084	440 aa		11.19	□□□□□ -0.62
BBX-223	ENST00000473542	FAM98C	Q17RN3	349 aa	Known RBP	11.19	□□□□□ -0.62
BBX-223	ENST00000473542	IRX2	Q9BZI1	471 aa	Predicted RBP	11.19	□□□□□ -0.62
BBX-223	ENST00000473542	MAP3K7	O43318	606 aa		11.18	□□□□□ -0.62
BBX-223	ENST00000473542	HAP1	P54257	671 aa	Predicted RBP	11.16	□□□□□ -0.62
BBX-223	ENST00000473542	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.16	□□□□□ -0.62
BBX-223	ENST00000473542	C3orf80	F5H4A9	247 aa		11.15	□□□□□ -0.62
BBX-223	ENST00000473542	FAM198A	Q9UFP1	575 aa		11.15	□□□□□ -0.62
BBX-223	ENST00000473542	HPS5	Q9UPZ3	1129 aa		11.15	□□□□□ -0.62
BBX-223	ENST00000473542	SMAP	O00193	183 aa		11.14	□□□□□ -0.63
BBX-223	ENST00000473542	SPRYD3	Q8NCJ5	442 aa		11.14	□□□□□ -0.63
BBX-223	ENST00000473542	NYAP1	Q6ZVC0	841 aa		11.13	□□□□□ -0.63
BBX-223	ENST00000473542	LRCH3	Q96II8	777 aa		11.13	□□□□□ -0.63
BBX-223	ENST00000473542	TSR3	Q9UJK0	312 aa	Known RBP	11.13	□□□□□ -0.63
BBX-223	ENST00000473542	VSIG10	Q8N0Z9	540 aa		11.12	□□□□□ -0.63
BBX-223	ENST00000473542	KCNC4	Q03721	635 aa		11.11	□□□□□ -0.63
BBX-223	ENST00000473542	GRXCR2	A6NFK2	248 aa		11.1	□□□□□ -0.63
BBX-223	ENST00000473542	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.1	□□□□□ -0.63
BBX-223	ENST00000473542	E2F4	Q16254	413 aa		11.1	□□□□□ -0.63
BBX-223	ENST00000473542	PACS2	Q86VP3	889 aa		11.1	□□□□□ -0.63
BBX-223	ENST00000473542	CDCA7L	Q96GN5	454 aa		11.1	□□□□□ -0.63
BBX-223	ENST00000473542	CDHR5	Q9HBB8	845 aa		11.09	□□□□□ -0.63
BBX-223	ENST00000473542	PRSS12	P56730	875 aa		11.08	□□□□□ -0.64
BBX-223	ENST00000473542	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.08	□□□□□ -0.64
BBX-223	ENST00000473542	SAMD7	Q7Z3H4	446 aa		11.07	□□□□□ -0.64
BBX-223	ENST00000473542	CFAP44	Q96MT7	982 aa		11.06	□□□□□ -0.64
BBX-223	ENST00000473542	OSBP	P22059	807 aa		11.04	□□□□□ -0.64
BBX-223	ENST00000473542	PPP4C	P60510	307 aa		11.04	□□□□□ -0.64
BBX-223	ENST00000473542	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.04	□□□□□ -0.64
BBX-223	ENST00000473542	TATDN2	Q93075	761 aa		11.03	□□□□□ -0.64
BBX-223	ENST00000473542	PNMA3	Q9UL41	463 aa		11.03	□□□□□ -0.64
BBX-223	ENST00000473542	TJAP1	Q5JTD0	557 aa		11.01	□□□□□ -0.65
BBX-223	ENST00000473542	WDR70	Q9NW82	654 aa		11	□□□□□ -0.65
BBX-223	ENST00000473542	NUDT18	Q6ZVK8	323 aa		10.99	□□□□□ -0.65
BBX-223	ENST00000473542	CERK	Q8TCT0	537 aa		10.99	□□□□□ -0.65
BBX-223	ENST00000473542	NBPF26	B4DH59	902 aa		10.98	□□□□□ -0.65
BBX-223	ENST00000473542		Q6ZNB5	142 aa		10.97	□□□□□ -0.65
BBX-223	ENST00000473542	MTR	Q99707	1265 aa		10.97	□□□□□ -0.65
BBX-223	ENST00000473542	ZNF516	Q92618	1163 aa		10.96	□□□□□ -0.65
BBX-223	ENST00000473542	RNF40	O75150	1001 aa		10.95	□□□□□ -0.66
BBX-223	ENST00000473542	NPDC1	Q9NQX5	325 aa	Predicted RBP	10.95	□□□□□ -0.66
BBX-223	ENST00000473542	APLP1	P51693	650 aa		10.94	□□□□□ -0.66
BBX-223	ENST00000473542	LCE2B	O14633	110 aa		10.93	□□□□□ -0.66
BBX-223	ENST00000473542	PADI6	Q6TGC4	694 aa		10.93	□□□□□ -0.66
BBX-223	ENST00000473542	TTC13	Q8NBP0	860 aa		10.92	□□□□□ -0.66
BBX-223	ENST00000473542	PPP1R18	Q6NYC8	613 aa		10.91	□□□□□ -0.66
BBX-223	ENST00000473542	BCAN	Q96GW7	911 aa		10.91	□□□□□ -0.66
BBX-223	ENST00000473542	IL21	Q9HBE4	155 aa		10.91	□□□□□ -0.66
BBX-223	ENST00000473542	RBM27	Q9P2N5	1060 aa	Known RBP	10.91	□□□□□ -0.66
BBX-223	ENST00000473542	KDM2A	Q9Y2K7	1162 aa		10.91	□□□□□ -0.66
BBX-223	ENST00000473542	SWT1	Q5T5J6	900 aa	Known RBP	10.89	□□□□□ -0.67
BBX-223	ENST00000473542	NKX2-3	Q8TAU0	364 aa		10.89	□□□□□ -0.67
BBX-223	ENST00000473542	PRKD2	Q9BZL6	878 aa		10.89	□□□□□ -0.67
BBX-223	ENST00000473542	TSHZ2	Q9NRE2	1034 aa		10.89	□□□□□ -0.67
BBX-223	ENST00000473542	GFRA3	O60609	400 aa		10.87	□□□□□ -0.67
BBX-223	ENST00000473542	MLLT3	P42568	568 aa	Predicted RBP	10.87	□□□□□ -0.67
BBX-223	ENST00000473542	COPS2	P61201	443 aa		10.85	□□□□□ -0.67
BBX-223	ENST00000473542	HDGF	P51858	240 aa	Known RBP	10.84	□□□□□ -0.67
BBX-223	ENST00000473542	EYA1	Q99502	592 aa		10.84	□□□□□ -0.67
BBX-223	ENST00000473542	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	10.83	□□□□□ -0.68
BBX-223	ENST00000473542	KCNV2	Q8TDN2	545 aa		10.81	□□□□□ -0.68
BBX-223	ENST00000473542	LAPTM4A	Q15012	233 aa		10.8	□□□□□ -0.68
BBX-223	ENST00000473542	SLF2	Q8IX21	1173 aa		10.8	□□□□□ -0.68
BBX-223	ENST00000473542	TRAF7	Q6Q0C0	670 aa		10.78	□□□□□ -0.68
BBX-223	ENST00000473542		V9GY48	417 aa	Predicted RBP	10.78	□□□□□ -0.68
BBX-223	ENST00000473542	FAM161A	Q3B820	660 aa		10.76	□□□□□ -0.69
BBX-223	ENST00000473542	ARHGEF1	Q92888	912 aa	Known RBP	10.76	□□□□□ -0.69
BBX-223	ENST00000473542	NRG2	O14511	850 aa	Predicted RBP	10.75	□□□□□ -0.69
BBX-223	ENST00000473542	ZPR1	O75312	459 aa		10.75	□□□□□ -0.69
BBX-223	ENST00000473542	PTGDR	Q13258	359 aa		10.75	□□□□□ -0.69

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