RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 KRTAP3-2Q9BYR7 98 aa14.87□□□□□ -0.03
A1CF-209ENST00000473480 ADAM33Q9BZ11 813 aa14.86□□□□□ -0.03
A1CF-209ENST00000473480 EIF4G1Q04637 1599 aaKnown RBP14.85□□□□□ -0.03
A1CF-209ENST00000473480 SHROOM4Q9ULL8 1493 aa14.85□□□□□ -0.03
A1CF-209ENST00000473480 POTEEQ6S8J3 1075 aa14.85□□□□□ -0.03
A1CF-209ENST00000473480 SEMA3EO15041 775 aa14.84□□□□□ -0.03
A1CF-209ENST00000473480 AXIN2Q9Y2T1 843 aa14.84□□□□□ -0.03
A1CF-209ENST00000473480 PTPREP23469 700 aa14.83□□□□□ -0.04
A1CF-209ENST00000473480 KCNK17Q96T54 332 aa14.83□□□□□ -0.04
A1CF-209ENST00000473480 MLLT3P42568 568 aaPredicted RBP14.82□□□□□ -0.04
A1CF-209ENST00000473480 EN1Q05925 392 aaPredicted RBP14.8□□□□□ -0.04
A1CF-209ENST00000473480 RBM33Q96EV2 1170 aaKnown RBP14.8□□□□□ -0.04
A1CF-209ENST00000473480 OSBPP22059 807 aa14.79□□□□□ -0.04
A1CF-209ENST00000473480 PSEN2P49810 448 aa14.79□□□□□ -0.04
A1CF-209ENST00000473480 LSM11P83369 360 aaKnown RBP eCLIP14.79□□□□□ -0.04
A1CF-209ENST00000473480 MAP3K7O43318 606 aa14.78□□□□□ -0.04
A1CF-209ENST00000473480 TESPA1A2RU30 521 aaPredicted RBP14.77□□□□□ -0.05
A1CF-209ENST00000473480 C6orf132Q5T0Z8 1188 aa14.77□□□□□ -0.05
A1CF-209ENST00000473480 SMYD5Q6GMV2 418 aa14.75□□□□□ -0.05
A1CF-209ENST00000473480 DMRTA1Q5VZB9 504 aa14.74□□□□□ -0.05
A1CF-209ENST00000473480 ANKRD13DQ6ZTN6 518 aa14.74□□□□□ -0.05
A1CF-209ENST00000473480 PPP1R3GB7ZBB8 358 aa14.73□□□□□ -0.05
A1CF-209ENST00000473480 PRIM1P49642 420 aaKnown RBP14.73□□□□□ -0.05
A1CF-209ENST00000473480 TSR1Q2NL82 804 aaKnown RBP14.71□□□□□ -0.05
A1CF-209ENST00000473480 TK2O00142 265 aa14.7□□□□□ -0.06
A1CF-209ENST00000473480 COL9A1P20849 921 aa14.68□□□□□ -0.06
A1CF-209ENST00000473480 SLC4A5Q9BY07 1137 aa14.68□□□□□ -0.06
A1CF-209ENST00000473480 ADGRD1Q6QNK2 874 aa14.67□□□□□ -0.06
A1CF-209ENST00000473480 ERCC6Q03468 1493 aa14.67□□□□□ -0.06
A1CF-209ENST00000473480 TULP1O00294 542 aaPredicted RBP14.66□□□□□ -0.06
A1CF-209ENST00000473480 ZBED2Q9BTP6 218 aa14.66□□□□□ -0.06
A1CF-209ENST00000473480 CERKQ8TCT0 537 aa14.65□□□□□ -0.06
A1CF-209ENST00000473480 VPS9D1Q9Y2B5 631 aa14.64□□□□□ -0.07
A1CF-209ENST00000473480 MYO15BQ96JP2 1530 aa14.63□□□□□ -0.07
A1CF-209ENST00000473480 SPNS2Q8IVW8 549 aa14.63□□□□□ -0.07
A1CF-209ENST00000473480 CDHR5Q9HBB8 845 aa14.62□□□□□ -0.07
A1CF-209ENST00000473480 NUTM2FA1L443 756 aa14.59□□□□□ -0.07
A1CF-209ENST00000473480 RBM26Q5T8P6 1007 aaKnown RBP14.59□□□□□ -0.07
A1CF-209ENST00000473480 PROX2Q3B8N5 592 aa14.58□□□□□ -0.08
A1CF-209ENST00000473480 HRO43593 1189 aa14.57□□□□□ -0.08
A1CF-209ENST00000473480 ONECUT3O60422 494 aaPredicted RBP14.57□□□□□ -0.08
A1CF-209ENST00000473480 NPDC1Q9NQX5 325 aaPredicted RBP14.56□□□□□ -0.08
A1CF-209ENST00000473480 TRIM6-TRIM34B2RNG4 842 aa14.55□□□□□ -0.08
A1CF-209ENST00000473480 PRSS12P56730 875 aa14.55□□□□□ -0.08
A1CF-209ENST00000473480 STAC3Q96MF2 364 aa14.55□□□□□ -0.08
A1CF-209ENST00000473480 RABGEF1Q9UJ41 708 aa14.55□□□□□ -0.08
A1CF-209ENST00000473480 PTGDRQ13258 359 aa14.54□□□□□ -0.08
A1CF-209ENST00000473480 CDCA7LQ96GN5 454 aa14.54□□□□□ -0.08
A1CF-209ENST00000473480 NBPF3Q9H094 633 aa14.53□□□□□ -0.08
A1CF-209ENST00000473480 RBM27Q9P2N5 1060 aaKnown RBP14.53□□□□□ -0.08
A1CF-209ENST00000473480 BHMG1C9JSJ3 638 aaPredicted RBP14.52□□□□□ -0.09
A1CF-209ENST00000473480 FCHSD2O94868 740 aa14.52□□□□□ -0.09
A1CF-209ENST00000473480 PACS2Q86VP3 889 aa14.51□□□□□ -0.09
A1CF-209ENST00000473480 KIAA1468Q9P260 1216 aa14.51□□□□□ -0.09
A1CF-209ENST00000473480 MYT1LQ9UL68 1186 aa14.51□□□□□ -0.09
A1CF-209ENST00000473480 TSKSQ9UJT2 592 aa14.5□□□□□ -0.09
A1CF-209ENST00000473480 MMRN1Q13201 1228 aa14.49□□□□□ -0.09
A1CF-209ENST00000473480 GPIHBP1Q8IV16 184 aa14.49□□□□□ -0.09
A1CF-209ENST00000473480 PLSCR2Q9NRY7 297 aa14.49□□□□□ -0.09
A1CF-209ENST00000473480 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.48□□□□□ -0.09
A1CF-209ENST00000473480 MRPL50Q8N5N7 158 aaKnown RBP14.48□□□□□ -0.09
A1CF-209ENST00000473480 BCANQ96GW7 911 aa14.48□□□□□ -0.09
A1CF-209ENST00000473480 PADI6Q6TGC4 694 aa14.46□□□□□ -0.09
A1CF-209ENST00000473480 HIC1Q14526 733 aa14.45□□□□□ -0.1
A1CF-209ENST00000473480 TTC13Q8NBP0 860 aa14.45□□□□□ -0.1
A1CF-209ENST00000473480 FAM198AQ9UFP1 575 aa14.44□□□□□ -0.1
A1CF-209ENST00000473480 LMOD2Q6P5Q4 547 aa14.43□□□□□ -0.1
A1CF-209ENST00000473480 LAPTM4BQ86VI4 370 aa14.43□□□□□ -0.1
A1CF-209ENST00000473480 RNF166Q96A37 237 aaPredicted RBP14.43□□□□□ -0.1
A1CF-209ENST00000473480 NBPF26B4DH59 902 aa14.42□□□□□ -0.1
A1CF-209ENST00000473480 GPR37O15354 613 aa14.42□□□□□ -0.1
A1CF-209ENST00000473480 GOLGA8CPA6NN73 597 aa14.41□□□□□ -0.1
A1CF-209ENST00000473480 SEPT9Q9UHD8 586 aaPredicted RBP14.4□□□□□ -0.1
A1CF-209ENST00000473480 GNPATO15228 680 aa14.39□□□□□ -0.11
A1CF-209ENST00000473480 TATDN2Q93075 761 aa14.39□□□□□ -0.11
A1CF-209ENST00000473480 FAM98CQ17RN3 349 aaKnown RBP14.38□□□□□ -0.11
A1CF-209ENST00000473480 PNMA3Q9UL41 463 aa14.38□□□□□ -0.11
A1CF-209ENST00000473480 NUDT18Q6ZVK8 323 aa14.37□□□□□ -0.11
A1CF-209ENST00000473480 SCRIBQ14160 1630 aa14.37□□□□□ -0.11
A1CF-209ENST00000473480 SMAPO00193 183 aa14.35□□□□□ -0.11
A1CF-209ENST00000473480 WNT2BQ93097 391 aa14.34□□□□□ -0.11
A1CF-209ENST00000473480 KCTD12Q96CX2 325 aaKnown RBP14.34□□□□□ -0.11
A1CF-209ENST00000473480 ZFRQ96KR1 1074 aaKnown RBP14.34□□□□□ -0.11
A1CF-209ENST00000473480 C3orf80F5H4A9 247 aa14.33□□□□□ -0.12
A1CF-209ENST00000473480 ANKK1Q8NFD2 765 aa14.32□□□□□ -0.12
A1CF-209ENST00000473480 ADGRG1Q9Y653 693 aa14.32□□□□□ -0.12
A1CF-209ENST00000473480 FECHP22830 423 aa14.31□□□□□ -0.12
A1CF-209ENST00000473480 RBM46Q8TBY0 533 aaKnown RBP14.3□□□□□ -0.12
A1CF-209ENST00000473480 EYA1Q99502 592 aa14.3□□□□□ -0.12
A1CF-209ENST00000473480 OATP04181 439 aa14.28□□□□□ -0.12
A1CF-209ENST00000473480 FAM161AQ3B820 660 aa14.26□□□□□ -0.13
A1CF-209ENST00000473480 THSD4Q6ZMP0 1018 aa14.26□□□□□ -0.13
A1CF-209ENST00000473480 HDGFP51858 240 aaKnown RBP14.25□□□□□ -0.13
A1CF-209ENST00000473480 ZC3H15Q8WU90 426 aaKnown RBP14.25□□□□□ -0.13
A1CF-209ENST00000473480 SOWAHBA6NEL2 793 aa14.24□□□□□ -0.13
A1CF-209ENST00000473480 MAP2K5Q13163 448 aa14.24□□□□□ -0.13
A1CF-209ENST00000473480 LRCH3Q96II8 777 aa14.24□□□□□ -0.13
A1CF-209ENST00000473480 HCSTQ9UBK5 93 aa14.24□□□□□ -0.13
A1CF-209ENST00000473480 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.23□□□□□ -0.13
A1CF-209ENST00000473480 SAMD7Q7Z3H4 446 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms