RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 FAM50AQ14320 339 aaKnown RBP17.8■□□□□ 0.44
CPNE1-222ENST00000473373 DNMT1P26358 1616 aaKnown RBP17.79■□□□□ 0.44
CPNE1-222ENST00000473373 SOCS7O14512 581 aa17.77■□□□□ 0.44
CPNE1-222ENST00000473373 ZMYM3Q14202 1370 aa17.77■□□□□ 0.43
CPNE1-222ENST00000473373 CFAP65Q6ZU64 1925 aaKnown RBP17.76■□□□□ 0.43
CPNE1-222ENST00000473373 LTBP4Q8N2S1 1624 aa17.76■□□□□ 0.43
CPNE1-222ENST00000473373 EIF2AK4Q9P2K8 1649 aaKnown RBP17.76■□□□□ 0.43
CPNE1-222ENST00000473373 NCKAP5LQ9HCH0 1330 aa17.75■□□□□ 0.43
CPNE1-222ENST00000473373 DAPK1P53355 1430 aa17.75■□□□□ 0.43
CPNE1-222ENST00000473373 NCOA1Q15788 1441 aa17.75■□□□□ 0.43
CPNE1-222ENST00000473373 PPARGC1BQ86YN6 1023 aaKnown RBP17.75■□□□□ 0.43
CPNE1-222ENST00000473373 PPP6R1Q9UPN7 881 aa17.75■□□□□ 0.43
CPNE1-222ENST00000473373 KDM5DQ9BY66 1539 aa17.74■□□□□ 0.43
CPNE1-222ENST00000473373 SHANK2Q9UPX8 1470 aa17.74■□□□□ 0.43
CPNE1-222ENST00000473373 WASHC2CQ9Y4E1 1318 aa17.73■□□□□ 0.43
CPNE1-222ENST00000473373 DUOX2Q9NRD8 1548 aa17.73■□□□□ 0.43
CPNE1-222ENST00000473373 CHIC2Q9UKJ5 165 aa17.73■□□□□ 0.43
CPNE1-222ENST00000473373 TCOF1Q13428 1488 aaKnown RBP17.73■□□□□ 0.43
CPNE1-222ENST00000473373 CAMSAP1Q5T5Y3 1602 aa17.72■□□□□ 0.43
CPNE1-222ENST00000473373 CEP152O94986 1710 aa17.72■□□□□ 0.43
CPNE1-222ENST00000473373 RRP7BPQ9NSQ0 103 aa17.72■□□□□ 0.43
CPNE1-222ENST00000473373 MYO3AQ8NEV4 1616 aa17.72■□□□□ 0.43
CPNE1-222ENST00000473373 ABCC5O15440 1437 aa17.72■□□□□ 0.43
CPNE1-222ENST00000473373 ZC3H13Q5T200 1668 aaKnown RBP17.71■□□□□ 0.43
CPNE1-222ENST00000473373 KIF15Q9NS87 1388 aa17.71■□□□□ 0.43
CPNE1-222ENST00000473373 RNF17Q9BXT8 1623 aaKnown RBP17.71■□□□□ 0.43
CPNE1-222ENST00000473373 NPATQ14207 1427 aa17.71■□□□□ 0.43
CPNE1-222ENST00000473373 FAM135AQ9P2D6 1515 aa17.7■□□□□ 0.42
CPNE1-222ENST00000473373 ZNF335Q9H4Z2 1342 aaPredicted RBP17.7■□□□□ 0.42
CPNE1-222ENST00000473373 ANKRD30AQ9BXX3 1397 aa17.69■□□□□ 0.42
CPNE1-222ENST00000473373 SPATA31D1Q6ZQQ2 1576 aa17.69■□□□□ 0.42
CPNE1-222ENST00000473373 UBAP1LF5GYI3 381 aa17.67■□□□□ 0.42
CPNE1-222ENST00000473373 IQSEC2Q5JU85 1478 aa17.67■□□□□ 0.42
CPNE1-222ENST00000473373 ZNF142P52746 1687 aaPredicted RBP17.67■□□□□ 0.42
CPNE1-222ENST00000473373 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.66■□□□□ 0.42
CPNE1-222ENST00000473373 ERBINQ96RT1 1412 aa17.65■□□□□ 0.42
CPNE1-222ENST00000473373 CEP170BQ9Y4F5 1589 aaPredicted RBP17.65■□□□□ 0.42
CPNE1-222ENST00000473373 PTPRKQ15262 1439 aa17.64■□□□□ 0.42
CPNE1-222ENST00000473373 ITGAEP38570 1179 aa17.64■□□□□ 0.41
CPNE1-222ENST00000473373 KANK1Q14678 1352 aa17.64■□□□□ 0.41
CPNE1-222ENST00000473373 PKD2Q13563 968 aa17.63■□□□□ 0.41
CPNE1-222ENST00000473373 PZPP20742 1482 aa17.63■□□□□ 0.41
CPNE1-222ENST00000473373 ABCC3O15438 1527 aa17.62■□□□□ 0.41
CPNE1-222ENST00000473373 TNRQ92752 1358 aa17.61■□□□□ 0.41
CPNE1-222ENST00000473373 FBXO31Q5XUX0 539 aaPredicted RBP17.6■□□□□ 0.41
CPNE1-222ENST00000473373 MROH1Q8NDA8 1641 aa17.6■□□□□ 0.41
CPNE1-222ENST00000473373 DEPDC5O75140 1603 aa17.58■□□□□ 0.41
CPNE1-222ENST00000473373 PRDM15P57071 1507 aaPredicted RBP17.58■□□□□ 0.41
CPNE1-222ENST00000473373 PLA2R1Q13018 1463 aa17.58■□□□□ 0.41
CPNE1-222ENST00000473373 POLR1AO95602 1720 aaPredicted RBP17.58■□□□□ 0.4
CPNE1-222ENST00000473373 ADGRL2O95490 1459 aa17.57■□□□□ 0.4
CPNE1-222ENST00000473373 A2ML1A8K2U0 1454 aa17.56■□□□□ 0.4
CPNE1-222ENST00000473373 SCAF1Q9H7N4 1312 aaKnown RBP17.55■□□□□ 0.4
CPNE1-222ENST00000473373 ANKRD50Q9ULJ7 1429 aa17.54■□□□□ 0.4
CPNE1-222ENST00000473373 PIP4K2BP78356 416 aa17.53■□□□□ 0.4
CPNE1-222ENST00000473373 UGGT1Q9NYU2 1555 aa17.53■□□□□ 0.4
CPNE1-222ENST00000473373 ERVK-7P63135 1459 aa17.52■□□□□ 0.4
CPNE1-222ENST00000473373 NLRP1Q9C000 1473 aa17.52■□□□□ 0.4
CPNE1-222ENST00000473373 HSPA1LP34931 641 aa17.5■□□□□ 0.39
CPNE1-222ENST00000473373 THEMISQ8N1K5 641 aaPredicted RBP17.49■□□□□ 0.39
CPNE1-222ENST00000473373 STAG3Q9UJ98 1225 aa17.49■□□□□ 0.39
CPNE1-222ENST00000473373 GCC2Q8IWJ2 1684 aa17.48■□□□□ 0.39
CPNE1-222ENST00000473373 TOM1O60784 492 aa17.47■□□□□ 0.39
CPNE1-222ENST00000473373 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.47■□□□□ 0.39
CPNE1-222ENST00000473373 UBR1Q8IWV7 1749 aa17.47■□□□□ 0.39
CPNE1-222ENST00000473373 ROCK1Q13464 1354 aa17.46■□□□□ 0.39
CPNE1-222ENST00000473373 TET3O43151 1660 aa17.45■□□□□ 0.38
CPNE1-222ENST00000473373 UNC13BO14795 1591 aa17.45■□□□□ 0.38
CPNE1-222ENST00000473373 ANKLE2Q86XL3 938 aa17.45■□□□□ 0.38
CPNE1-222ENST00000473373 EFCAB6Q5THR3 1501 aa17.45■□□□□ 0.38
CPNE1-222ENST00000473373 ARHGAP31Q2M1Z3 1444 aa17.45■□□□□ 0.38
CPNE1-222ENST00000473373 VWDEQ8N2E2 1590 aa17.44■□□□□ 0.38
CPNE1-222ENST00000473373 PIK3C2BO00750 1634 aa17.43■□□□□ 0.38
CPNE1-222ENST00000473373 LMTK2Q8IWU2 1503 aa17.43■□□□□ 0.38
CPNE1-222ENST00000473373 RRBP1Q9P2E9 1410 aaKnown RBP17.43■□□□□ 0.38
CPNE1-222ENST00000473373 NEURL4Q96JN8 1562 aa17.43■□□□□ 0.38
CPNE1-222ENST00000473373 CPS1P31327 1500 aa17.42■□□□□ 0.38
CPNE1-222ENST00000473373 IQGAP1P46940 1657 aa17.41■□□□□ 0.38
CPNE1-222ENST00000473373 IQGAP3Q86VI3 1631 aa17.39■□□□□ 0.38
CPNE1-222ENST00000473373 MYO5BQ9ULV0 1848 aa17.39■□□□□ 0.37
CPNE1-222ENST00000473373 E9PCH4 1651 aa17.38■□□□□ 0.37
CPNE1-222ENST00000473373 NUP155O75694 1391 aa17.38■□□□□ 0.37
CPNE1-222ENST00000473373 NPHP4O75161 1426 aaPredicted RBP17.38■□□□□ 0.37
CPNE1-222ENST00000473373 RPRD2Q5VT52 1461 aaKnown RBP17.37■□□□□ 0.37
CPNE1-222ENST00000473373 SYNMO15061 1565 aa17.37■□□□□ 0.37
CPNE1-222ENST00000473373 MED1Q15648 1581 aaPredicted RBP17.37■□□□□ 0.37
CPNE1-222ENST00000473373 EID1Q9Y6B2 187 aa17.37■□□□□ 0.37
CPNE1-222ENST00000473373 KDM5AP29375 1690 aaKnown RBP17.36■□□□□ 0.37
CPNE1-222ENST00000473373 CHGAP10645 457 aaKnown RBP17.35■□□□□ 0.37
CPNE1-222ENST00000473373 SCAF11Q99590 1463 aaKnown RBP17.33■□□□□ 0.37
CPNE1-222ENST00000473373 TXNDC2Q86VQ3 553 aa17.33■□□□□ 0.36
CPNE1-222ENST00000473373 TRIM52Q96A61 297 aa17.33■□□□□ 0.36
CPNE1-222ENST00000473373 BCANQ96GW7 911 aa17.33■□□□□ 0.36
CPNE1-222ENST00000473373 ADGRB3O60242 1522 aa17.32■□□□□ 0.36
CPNE1-222ENST00000473373 MED14O60244 1454 aa17.32■□□□□ 0.36
CPNE1-222ENST00000473373 IDI1Q13907 227 aa17.32■□□□□ 0.36
CPNE1-222ENST00000473373 SPHKAPQ2M3C7 1700 aa17.32■□□□□ 0.36
CPNE1-222ENST00000473373 NOS1P29475 1434 aa17.31■□□□□ 0.36
CPNE1-222ENST00000473373 SLC52A1Q9NWF4 448 aa17.31■□□□□ 0.36
CPNE1-222ENST00000473373 ALKQ9UM73 1620 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms