RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 SALL2Q9Y467 1007 aaPredicted RBP19.01■□□□□ 0.63
NHLRC3-204ENST00000473371 GRIN2AQ12879 1464 aa19.01■□□□□ 0.63
NHLRC3-204ENST00000473371 RCAN3Q9UKA8 241 aa19■□□□□ 0.63
NHLRC3-204ENST00000473371 PLB1Q6P1J6 1458 aa19■□□□□ 0.63
NHLRC3-204ENST00000473371 DCAF11Q8TEB1 546 aa19■□□□□ 0.63
NHLRC3-204ENST00000473371 NPM2Q86SE8 214 aaKnown RBP19■□□□□ 0.63
NHLRC3-204ENST00000473371 ADCY10Q96PN6 1610 aa18.98■□□□□ 0.63
NHLRC3-204ENST00000473371 TCERG1O14776 1098 aaKnown RBP18.98■□□□□ 0.63
NHLRC3-204ENST00000473371 CLASP1Q7Z460 1538 aa18.97■□□□□ 0.63
NHLRC3-204ENST00000473371 C9orf84Q5VXU9 1444 aa18.96■□□□□ 0.63
NHLRC3-204ENST00000473371 NLRP13Q86W25 1043 aa18.95■□□□□ 0.62
NHLRC3-204ENST00000473371 TSPY4P0CV99 314 aa18.95■□□□□ 0.62
NHLRC3-204ENST00000473371 TSPY10P0CW01 314 aa18.95■□□□□ 0.62
NHLRC3-204ENST00000473371 PDE3BQ13370 1112 aa18.94■□□□□ 0.62
NHLRC3-204ENST00000473371 E9PCH4 1651 aa18.93■□□□□ 0.62
NHLRC3-204ENST00000473371 PDE4AP27815 886 aa18.93■□□□□ 0.62
NHLRC3-204ENST00000473371 PLEKHD1A6NEE1 506 aa18.93■□□□□ 0.62
NHLRC3-204ENST00000473371 SHANK2Q9UPX8 1470 aa18.92■□□□□ 0.62
NHLRC3-204ENST00000473371 KDM5DQ9BY66 1539 aa18.9■□□□□ 0.62
NHLRC3-204ENST00000473371 CDC42BPAQ5VT25 1732 aa18.9■□□□□ 0.62
NHLRC3-204ENST00000473371 PARD3Q8TEW0 1356 aa18.9■□□□□ 0.62
NHLRC3-204ENST00000473371 CHMP7Q8WUX9 453 aaPredicted RBP18.9■□□□□ 0.62
NHLRC3-204ENST00000473371 CARMIL2Q6F5E8 1435 aa18.89■□□□□ 0.61
NHLRC3-204ENST00000473371 MS4A1P11836 297 aa18.88■□□□□ 0.61
NHLRC3-204ENST00000473371 BACH2Q9BYV9 841 aa18.88■□□□□ 0.61
NHLRC3-204ENST00000473371 CDCA7LQ96GN5 454 aa18.88■□□□□ 0.61
NHLRC3-204ENST00000473371 HNRNPMP52272 730 aaKnown RBP eCLIP18.86■□□□□ 0.61
NHLRC3-204ENST00000473371 FBLN2P98095 1184 aa18.86■□□□□ 0.61
NHLRC3-204ENST00000473371 LAS1LQ9Y4W2 734 aaKnown RBP18.85■□□□□ 0.61
NHLRC3-204ENST00000473371 PTPRGP23470 1445 aa18.85■□□□□ 0.61
NHLRC3-204ENST00000473371 ABCC10Q5T3U5 1492 aa18.85■□□□□ 0.61
NHLRC3-204ENST00000473371 CC2D1BQ5T0F9 858 aaKnown RBP18.84■□□□□ 0.61
NHLRC3-204ENST00000473371 JPH4Q96JJ6 628 aa18.84■□□□□ 0.61
NHLRC3-204ENST00000473371 PER1O15534 1290 aaPredicted RBP18.83■□□□□ 0.61
NHLRC3-204ENST00000473371 PLIN1O60240 522 aa18.83■□□□□ 0.61
NHLRC3-204ENST00000473371 RGL3Q3MIN7 710 aa18.83■□□□□ 0.61
NHLRC3-204ENST00000473371 PRAG1Q86YV5 1406 aa18.83■□□□□ 0.6
NHLRC3-204ENST00000473371 NBPF1Q3BBV0 1214 aa18.82■□□□□ 0.6
NHLRC3-204ENST00000473371 NEFMP07197 916 aa18.82■□□□□ 0.6
NHLRC3-204ENST00000473371 TRPM1Q7Z4N2 1603 aa18.81■□□□□ 0.6
NHLRC3-204ENST00000473371 CCDC144AA2RUR9 1427 aa18.81■□□□□ 0.6
NHLRC3-204ENST00000473371 CRBNQ96SW2 442 aa18.8■□□□□ 0.6
NHLRC3-204ENST00000473371 FAM135AQ9P2D6 1515 aa18.8■□□□□ 0.6
NHLRC3-204ENST00000473371 ATP10BO94823 1461 aa18.8■□□□□ 0.6
NHLRC3-204ENST00000473371 WASHC2CQ9Y4E1 1318 aa18.79■□□□□ 0.6
NHLRC3-204ENST00000473371 USP35Q9P2H5 1018 aa18.78■□□□□ 0.6
NHLRC3-204ENST00000473371 PPM1GO15355 546 aaPredicted RBP18.78■□□□□ 0.6
NHLRC3-204ENST00000473371 ARHGEF5Q12774 1597 aa18.77■□□□□ 0.6
NHLRC3-204ENST00000473371 PANK3Q9H999 370 aa18.77■□□□□ 0.6
NHLRC3-204ENST00000473371 ABCA8O94911 1581 aa18.77■□□□□ 0.6
NHLRC3-204ENST00000473371 BLMP54132 1417 aaPredicted RBP18.77■□□□□ 0.6
NHLRC3-204ENST00000473371 COL17A1Q9UMD9 1497 aaPredicted RBP18.77■□□□□ 0.6
NHLRC3-204ENST00000473371 DISP3Q9P2K9 1392 aa18.76■□□□□ 0.59
NHLRC3-204ENST00000473371 INSRP06213 1382 aa18.76■□□□□ 0.59
NHLRC3-204ENST00000473371 GPRASP1Q5JY77 1395 aa18.75■□□□□ 0.59
NHLRC3-204ENST00000473371 SKAP1Q86WV1 359 aa18.75■□□□□ 0.59
NHLRC3-204ENST00000473371 DDRGK1Q96HY6 314 aa18.75■□□□□ 0.59
NHLRC3-204ENST00000473371 CCDC141Q6ZP82 1450 aa18.74■□□□□ 0.59
NHLRC3-204ENST00000473371 TESK2Q96S53 571 aa18.74■□□□□ 0.59
NHLRC3-204ENST00000473371 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.74■□□□□ 0.59
NHLRC3-204ENST00000473371 ERBINQ96RT1 1412 aa18.73■□□□□ 0.59
NHLRC3-204ENST00000473371 ZMYM4Q5VZL5 1548 aa18.73■□□□□ 0.59
NHLRC3-204ENST00000473371 TMF1P82094 1093 aa18.72■□□□□ 0.59
NHLRC3-204ENST00000473371 A2MP01023 1474 aa18.72■□□□□ 0.59
NHLRC3-204ENST00000473371 PLEKHH2Q8IVE3 1493 aa18.72■□□□□ 0.59
NHLRC3-204ENST00000473371 PRDM15P57071 1507 aaPredicted RBP18.71■□□□□ 0.58
NHLRC3-204ENST00000473371 RSPH4AQ5TD94 716 aa18.7■□□□□ 0.58
NHLRC3-204ENST00000473371 C20orf194Q5TEA3 1177 aa18.7■□□□□ 0.58
NHLRC3-204ENST00000473371 PLA2R1Q13018 1463 aa18.69■□□□□ 0.58
NHLRC3-204ENST00000473371 IL27Q8NEV9 243 aa18.69■□□□□ 0.58
NHLRC3-204ENST00000473371 SAMD9LQ8IVG5 1584 aa18.69■□□□□ 0.58
NHLRC3-204ENST00000473371 LAMC1P11047 1609 aa18.69■□□□□ 0.58
NHLRC3-204ENST00000473371 ADAMTS8Q9UP79 889 aa18.68■□□□□ 0.58
NHLRC3-204ENST00000473371 WDR43Q15061 677 aaKnown RBP eCLIP18.65■□□□□ 0.58
NHLRC3-204ENST00000473371 EIF2AK4Q9P2K8 1649 aaKnown RBP18.65■□□□□ 0.58
NHLRC3-204ENST00000473371 CDC42BPBQ9Y5S2 1711 aa18.65■□□□□ 0.58
NHLRC3-204ENST00000473371 CENPQQ7L2Z9 268 aaPredicted RBP18.64■□□□□ 0.58
NHLRC3-204ENST00000473371 DAXXQ9UER7 740 aaPredicted RBP18.64■□□□□ 0.58
NHLRC3-204ENST00000473371 KDM2BQ8NHM5 1336 aa18.64■□□□□ 0.57
NHLRC3-204ENST00000473371 MYO5CQ9NQX4 1742 aa18.64■□□□□ 0.57
NHLRC3-204ENST00000473371 UNC13BO14795 1591 aa18.64■□□□□ 0.57
NHLRC3-204ENST00000473371 PREX2Q70Z35 1606 aa18.63■□□□□ 0.57
NHLRC3-204ENST00000473371 KNSTRNQ9Y448 316 aa18.63■□□□□ 0.57
NHLRC3-204ENST00000473371 RTN4Q9NQC3 1192 aaKnown RBP18.62■□□□□ 0.57
NHLRC3-204ENST00000473371 SYCP2Q9BX26 1530 aa18.62■□□□□ 0.57
NHLRC3-204ENST00000473371 PPP2R1AP30153 589 aa18.61■□□□□ 0.57
NHLRC3-204ENST00000473371 SLC4A3P48751 1232 aa18.61■□□□□ 0.57
NHLRC3-204ENST00000473371 DUSP27Q5VZP5 1158 aa18.61■□□□□ 0.57
NHLRC3-204ENST00000473371 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.61■□□□□ 0.57
NHLRC3-204ENST00000473371 PLEKHH1Q9ULM0 1364 aa18.61■□□□□ 0.57
NHLRC3-204ENST00000473371 GOLGA2Q08379 1002 aa18.6■□□□□ 0.57
NHLRC3-204ENST00000473371 FAM161AQ3B820 660 aa18.59■□□□□ 0.57
NHLRC3-204ENST00000473371 NFKBIBQ15653 356 aa18.59■□□□□ 0.57
NHLRC3-204ENST00000473371 IQGAP3Q86VI3 1631 aa18.58■□□□□ 0.57
NHLRC3-204ENST00000473371 ARHGAP5Q13017 1502 aa18.58■□□□□ 0.56
NHLRC3-204ENST00000473371 MAST1Q9Y2H9 1570 aa18.57■□□□□ 0.56
NHLRC3-204ENST00000473371 MAGI2Q86UL8 1455 aa18.57■□□□□ 0.56
NHLRC3-204ENST00000473371 GSE1Q14687 1217 aa18.56■□□□□ 0.56
NHLRC3-204ENST00000473371 WDR7Q9Y4E6 1490 aa18.56■□□□□ 0.56
NHLRC3-204ENST00000473371 ANO8Q9HCE9 1232 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms