RNA–Protein interactions for RNA: ENST00000473230.1

RCL1-209, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 3

Gene RCL1, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-209ENST00000473230 HOXB3P14651 431 aaPredicted RBP11.18□□□□□ -0.62
RCL1-209ENST00000473230 ILDR1Q86SU0 546 aaPredicted RBP11.18□□□□□ -0.62
RCL1-209ENST00000473230 PLB1Q6P1J6 1458 aa11.18□□□□□ -0.62
RCL1-209ENST00000473230 HOXB1P14653 301 aaPredicted RBP11.15□□□□□ -0.62
RCL1-209ENST00000473230 DOK7Q18PE1 504 aa11.15□□□□□ -0.62
RCL1-209ENST00000473230 PCGF6Q9BYE7 350 aa11.15□□□□□ -0.62
RCL1-209ENST00000473230 ASXL2Q76L83 1435 aa11.15□□□□□ -0.62
RCL1-209ENST00000473230 DIP2BQ9P265 1576 aa11.15□□□□□ -0.62
RCL1-209ENST00000473230 CTTNBP2Q8WZ74 1663 aa11.14□□□□□ -0.63
RCL1-209ENST00000473230 CIZ1Q9ULV3 898 aaPredicted RBP11.14□□□□□ -0.63
RCL1-209ENST00000473230 KDM5BQ9UGL1 1544 aa11.14□□□□□ -0.63
RCL1-209ENST00000473230 SPOCK2Q92563 424 aa11.13□□□□□ -0.63
RCL1-209ENST00000473230 RNF166Q96A37 237 aaPredicted RBP11.12□□□□□ -0.63
RCL1-209ENST00000473230 KIF13AQ9H1H9 1805 aa11.11□□□□□ -0.63
RCL1-209ENST00000473230 RIMBP2O15034 1052 aa11.1□□□□□ -0.63
RCL1-209ENST00000473230 HRCP23327 699 aa11.09□□□□□ -0.63
RCL1-209ENST00000473230 P3H3Q8IVL6 736 aa11.09□□□□□ -0.63
RCL1-209ENST00000473230 GLI2P10070 1586 aa11.08□□□□□ -0.64
RCL1-209ENST00000473230 WDR7Q9Y4E6 1490 aa11.08□□□□□ -0.64
RCL1-209ENST00000473230 VARS2Q5ST30 1063 aaKnown RBP11.08□□□□□ -0.64
RCL1-209ENST00000473230 RANGAP1P46060 587 aaPredicted RBP11.07□□□□□ -0.64
RCL1-209ENST00000473230 EPRSP07814 1512 aaKnown RBP11.07□□□□□ -0.64
RCL1-209ENST00000473230 TEX14Q8IWB6 1497 aa11.06□□□□□ -0.64
RCL1-209ENST00000473230 UBTFP17480 764 aaKnown RBP11.06□□□□□ -0.64
RCL1-209ENST00000473230 TRIM26Q12899 539 aaPredicted RBP11.06□□□□□ -0.64
RCL1-209ENST00000473230 ABCA8O94911 1581 aa11.06□□□□□ -0.64
RCL1-209ENST00000473230 ZCCHC11Q5TAX3 1644 aaKnown RBP11.06□□□□□ -0.64
RCL1-209ENST00000473230 MYT1LQ9UL68 1186 aa11.05□□□□□ -0.64
RCL1-209ENST00000473230 KDM6BO15054 1643 aa11.05□□□□□ -0.64
RCL1-209ENST00000473230 KIF21BO75037 1637 aa11.05□□□□□ -0.64
RCL1-209ENST00000473230 KCNH8Q96L42 1107 aa11.04□□□□□ -0.64
RCL1-209ENST00000473230 SAMD9Q5K651 1589 aa11.03□□□□□ -0.64
RCL1-209ENST00000473230 ARID3CA6NKF2 412 aa11.02□□□□□ -0.65
RCL1-209ENST00000473230 EFCAB5A4FU69 1503 aa11.02□□□□□ -0.65
RCL1-209ENST00000473230 EFCAB3Q8N7B9 438 aa11.01□□□□□ -0.65
RCL1-209ENST00000473230 CD109Q6YHK3 1445 aa11.01□□□□□ -0.65
RCL1-209ENST00000473230 FHOD3Q2V2M9 1422 aa11□□□□□ -0.65
RCL1-209ENST00000473230 ATP10BO94823 1461 aa11□□□□□ -0.65
RCL1-209ENST00000473230 MAP3K4Q9Y6R4 1608 aa10.98□□□□□ -0.65
RCL1-209ENST00000473230 TSPOAP1O95153 1857 aa10.98□□□□□ -0.65
RCL1-209ENST00000473230 PLEKHD1A6NEE1 506 aa10.98□□□□□ -0.65
RCL1-209ENST00000473230 ZNF687Q8N1G0 1237 aa10.98□□□□□ -0.65
RCL1-209ENST00000473230 MAGI3Q5TCQ9 1506 aa10.98□□□□□ -0.65
RCL1-209ENST00000473230 RAPGEF6Q8TEU7 1601 aa10.98□□□□□ -0.65
RCL1-209ENST00000473230 FMN1Q68DA7 1419 aa10.97□□□□□ -0.65
RCL1-209ENST00000473230 NUP153P49790 1475 aaKnown RBP10.95□□□□□ -0.66
RCL1-209ENST00000473230 PHLDB1Q86UU1 1377 aa10.95□□□□□ -0.66
RCL1-209ENST00000473230 ZSWIM6Q9HCJ5 1215 aa10.95□□□□□ -0.66
RCL1-209ENST00000473230 MICALL2Q8IY33 904 aa10.94□□□□□ -0.66
RCL1-209ENST00000473230 CDK11AQ9UQ88 783 aaPredicted RBP10.94□□□□□ -0.66
RCL1-209ENST00000473230 CFAP43Q8NDM7 1665 aa10.94□□□□□ -0.66
RCL1-209ENST00000473230 TMEM92Q6UXU6 159 aa10.93□□□□□ -0.66
RCL1-209ENST00000473230 ANKRD13DQ6ZTN6 518 aa10.93□□□□□ -0.66
RCL1-209ENST00000473230 ATP1B4Q9UN42 357 aaPredicted RBP10.93□□□□□ -0.66
RCL1-209ENST00000473230 PPRC1Q5VV67 1664 aaKnown RBP10.92□□□□□ -0.66
RCL1-209ENST00000473230 GPR153Q6NV75 609 aa10.91□□□□□ -0.66
RCL1-209ENST00000473230 COL17A1Q9UMD9 1497 aaPredicted RBP10.91□□□□□ -0.66
RCL1-209ENST00000473230 CEP162Q5TB80 1403 aa10.91□□□□□ -0.66
RCL1-209ENST00000473230 PTGER2P43116 358 aa10.9□□□□□ -0.66
RCL1-209ENST00000473230 NEO1Q92859 1461 aa10.89□□□□□ -0.67
RCL1-209ENST00000473230 ARHGAP35Q9NRY4 1499 aa10.89□□□□□ -0.67
RCL1-209ENST00000473230 ABCA9Q8IUA7 1624 aa10.89□□□□□ -0.67
RCL1-209ENST00000473230 ARAP3Q8WWN8 1544 aa10.89□□□□□ -0.67
RCL1-209ENST00000473230 ARSIQ5FYB1 569 aa10.88□□□□□ -0.67
RCL1-209ENST00000473230 HECW1Q76N89 1606 aa10.87□□□□□ -0.67
RCL1-209ENST00000473230 KDM4FA0A1W2PPD8 638 aa10.86□□□□□ -0.67
RCL1-209ENST00000473230 SOX12O15370 315 aa10.85□□□□□ -0.67
RCL1-209ENST00000473230 CLIP1P30622 1438 aa10.84□□□□□ -0.67
RCL1-209ENST00000473230 FANCAO15360 1455 aa10.83□□□□□ -0.68
RCL1-209ENST00000473230 ADGRL1O94910 1474 aa10.83□□□□□ -0.68
RCL1-209ENST00000473230 RAPGEF3O95398 923 aa10.83□□□□□ -0.68
RCL1-209ENST00000473230 CDK13Q14004 1512 aaKnown RBP10.83□□□□□ -0.68
RCL1-209ENST00000473230 CCDC18Q5T9S5 1454 aa10.82□□□□□ -0.68
RCL1-209ENST00000473230 CASKIN1Q8WXD9 1431 aa10.82□□□□□ -0.68
RCL1-209ENST00000473230 DENND4BO75064 1496 aaPredicted RBP10.81□□□□□ -0.68
RCL1-209ENST00000473230 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.81□□□□□ -0.68
RCL1-209ENST00000473230 EFCAB2Q5VUJ9 269 aa10.81□□□□□ -0.68
RCL1-209ENST00000473230 KHSRPQ92945 711 aaKnown RBP eCLIP10.81□□□□□ -0.681e-6■■□□□ 12.9
RCL1-209ENST00000473230 PHF8Q9UPP1 1060 aa10.81□□□□□ -0.68
RCL1-209ENST00000473230 TROQ12816 1431 aaPredicted RBP10.81□□□□□ -0.68
RCL1-209ENST00000473230 AKNAQ7Z591 1439 aa10.81□□□□□ -0.68
RCL1-209ENST00000473230 CFAP74Q9C0B2 1584 aa10.81□□□□□ -0.68
RCL1-209ENST00000473230 ZNF316A6NFI3 1004 aaPredicted RBP10.8□□□□□ -0.68
RCL1-209ENST00000473230 ZEB1P37275 1124 aaPredicted RBP10.8□□□□□ -0.68
RCL1-209ENST00000473230 MS4A4AQ96JQ5 239 aa10.8□□□□□ -0.68
RCL1-209ENST00000473230 PLCH2O75038 1416 aa10.8□□□□□ -0.68
RCL1-209ENST00000473230 LSM11P83369 360 aaKnown RBP eCLIP10.79□□□□□ -0.684e-17■■■□□ 18.1
RCL1-209ENST00000473230 PPARGC1BQ86YN6 1023 aaKnown RBP10.79□□□□□ -0.68
RCL1-209ENST00000473230 KIF14Q15058 1648 aa10.78□□□□□ -0.68
RCL1-209ENST00000473230 ECM2O94769 699 aaPredicted RBP10.78□□□□□ -0.68
RCL1-209ENST00000473230 FYCO1Q9BQS8 1478 aa10.78□□□□□ -0.68
RCL1-209ENST00000473230 ARID4BQ4LE39 1312 aaPredicted RBP10.78□□□□□ -0.68
RCL1-209ENST00000473230 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.77□□□□□ -0.69
RCL1-209ENST00000473230 ZFP91Q96JP5 570 aaPredicted RBP10.77□□□□□ -0.69
RCL1-209ENST00000473230 TTC37Q6PGP7 1564 aa10.77□□□□□ -0.69
RCL1-209ENST00000473230 RIOK3O14730 519 aaKnown RBP10.76□□□□□ -0.69
RCL1-209ENST00000473230 PKD2Q13563 968 aa10.76□□□□□ -0.69
RCL1-209ENST00000473230 SCAPERQ9BY12 1400 aa10.75□□□□□ -0.69
RCL1-209ENST00000473230 MAGI2Q86UL8 1455 aa10.75□□□□□ -0.69
RCL1-209ENST00000473230 PCF11O94913 1555 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms