RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 RAB3GAP2Q9H2M9 1393 aa11.13□□□□□ -0.63
CCDC171-205ENST00000472806 EIF4G3O43432 1585 aaKnown RBP11.12□□□□□ -0.63
CCDC171-205ENST00000472806 ITGAEP38570 1179 aa11.12□□□□□ -0.63
CCDC171-205ENST00000472806 C3orf67Q6ZVT6 689 aa11.12□□□□□ -0.63
CCDC171-205ENST00000472806 ZNF608Q9ULD9 1512 aaPredicted RBP11.11□□□□□ -0.63
CCDC171-205ENST00000472806 GRIN2AQ12879 1464 aa11.11□□□□□ -0.63
CCDC171-205ENST00000472806 MYOM3Q5VTT5 1437 aa11.1□□□□□ -0.63
CCDC171-205ENST00000472806 L3MBTL3Q96JM7 780 aaPredicted RBP11.1□□□□□ -0.63
CCDC171-205ENST00000472806 NCOA2Q15596 1464 aa11.1□□□□□ -0.63
CCDC171-205ENST00000472806 ACIN1Q9UKV3 1341 aaKnown RBP11.09□□□□□ -0.63
CCDC171-205ENST00000472806 SYNJ2O15056 1496 aa11.08□□□□□ -0.64
CCDC171-205ENST00000472806 RNF25Q96BH1 459 aaPredicted RBP11.08□□□□□ -0.64
CCDC171-205ENST00000472806 TIMELESSQ9UNS1 1208 aa11.08□□□□□ -0.64
CCDC171-205ENST00000472806 KIAA0556O60303 1618 aa11.07□□□□□ -0.64
CCDC171-205ENST00000472806 POTEB3A0JP26 581 aa11.07□□□□□ -0.64
CCDC171-205ENST00000472806 POTEBQ6S5H4 581 aa11.07□□□□□ -0.64
CCDC171-205ENST00000472806 EFCAB3Q8N7B9 438 aa11.07□□□□□ -0.64
CCDC171-205ENST00000472806 ARHGEF11O15085 1522 aa11.07□□□□□ -0.64
CCDC171-205ENST00000472806 EPRSP07814 1512 aaKnown RBP11.07□□□□□ -0.64
CCDC171-205ENST00000472806 LRRIQ1Q96JM4 1722 aa11.06□□□□□ -0.64
CCDC171-205ENST00000472806 CENPBP07199 599 aaPredicted RBP11.06□□□□□ -0.64
CCDC171-205ENST00000472806 CHMP7Q8WUX9 453 aaPredicted RBP11.05□□□□□ -0.64
CCDC171-205ENST00000472806 MIA2Q96PC5 1412 aa11.05□□□□□ -0.64
CCDC171-205ENST00000472806 CDK11AQ9UQ88 783 aaPredicted RBP11.05□□□□□ -0.64
CCDC171-205ENST00000472806 TCOF1Q13428 1488 aaKnown RBP11.05□□□□□ -0.64
CCDC171-205ENST00000472806 HFM1A2PYH4 1435 aa11.04□□□□□ -0.64
CCDC171-205ENST00000472806 CARMIL2Q6F5E8 1435 aa11.04□□□□□ -0.64
CCDC171-205ENST00000472806 PTPN23Q9H3S7 1636 aa11.04□□□□□ -0.64
CCDC171-205ENST00000472806 SNPHO15079 494 aa11.03□□□□□ -0.64
CCDC171-205ENST00000472806 TMEM121BQ9BXQ6 578 aaPredicted RBP11.03□□□□□ -0.64
CCDC171-205ENST00000472806 BOLA1Q9Y3E2 137 aa11.03□□□□□ -0.64
CCDC171-205ENST00000472806 DISP1Q96F81 1524 aa11.03□□□□□ -0.64
CCDC171-205ENST00000472806 MAPKBP1O60336 1514 aa11.02□□□□□ -0.65
CCDC171-205ENST00000472806 RAPGEF6Q8TEU7 1601 aa11.02□□□□□ -0.65
CCDC171-205ENST00000472806 AKNAQ7Z591 1439 aa11.01□□□□□ -0.65
CCDC171-205ENST00000472806 NUP160Q12769 1436 aa11.01□□□□□ -0.65
CCDC171-205ENST00000472806 HOXB3P14651 431 aaPredicted RBP10.99□□□□□ -0.65
CCDC171-205ENST00000472806 UACAQ9BZF9 1416 aa10.99□□□□□ -0.65
CCDC171-205ENST00000472806 MAGI3Q5TCQ9 1506 aa10.99□□□□□ -0.65
CCDC171-205ENST00000472806 CEP170Q5SW79 1584 aa10.99□□□□□ -0.65
CCDC171-205ENST00000472806 CDK13Q14004 1512 aaKnown RBP10.98□□□□□ -0.65
CCDC171-205ENST00000472806 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.97□□□□□ -0.65
CCDC171-205ENST00000472806 EMP3P54852 163 aa10.97□□□□□ -0.65
CCDC171-205ENST00000472806 ZFP91Q96JP5 570 aaPredicted RBP10.97□□□□□ -0.65
CCDC171-205ENST00000472806 GCC2Q8IWJ2 1684 aa10.96□□□□□ -0.65
CCDC171-205ENST00000472806 NUP153P49790 1475 aaKnown RBP10.96□□□□□ -0.65
CCDC171-205ENST00000472806 NAIPQ13075 1403 aa10.96□□□□□ -0.65
CCDC171-205ENST00000472806 FAM205CA6NFA0 338 aa10.96□□□□□ -0.65
CCDC171-205ENST00000472806 TMEM92Q6UXU6 159 aa10.96□□□□□ -0.65
CCDC171-205ENST00000472806 SPNS2Q8IVW8 549 aa10.96□□□□□ -0.65
CCDC171-205ENST00000472806 MS4A4AQ96JQ5 239 aa10.96□□□□□ -0.65
CCDC171-205ENST00000472806 TROQ12816 1431 aaPredicted RBP10.94□□□□□ -0.66
CCDC171-205ENST00000472806 RIOK3O14730 519 aaKnown RBP10.94□□□□□ -0.66
CCDC171-205ENST00000472806 JPH4Q96JJ6 628 aa10.94□□□□□ -0.66
CCDC171-205ENST00000472806 HS3ST6Q96QI5 342 aa10.94□□□□□ -0.66
CCDC171-205ENST00000472806 ITSN2Q9NZM3 1697 aa10.94□□□□□ -0.66
CCDC171-205ENST00000472806 ROCK1Q13464 1354 aa10.93□□□□□ -0.66
CCDC171-205ENST00000472806 MMRN1Q13201 1228 aa10.93□□□□□ -0.66
CCDC171-205ENST00000472806 PHF8Q9UPP1 1060 aa10.93□□□□□ -0.66
CCDC171-205ENST00000472806 PTPRKQ15262 1439 aa10.92□□□□□ -0.66
CCDC171-205ENST00000472806 ADCY10Q96PN6 1610 aa10.92□□□□□ -0.66
CCDC171-205ENST00000472806 G3V3G9 751 aa10.92□□□□□ -0.66
CCDC171-205ENST00000472806 KRTAP3-3Q9BYR6 98 aa10.92□□□□□ -0.66
CCDC171-205ENST00000472806 KRTAP3-2Q9BYR7 98 aa10.92□□□□□ -0.66
CCDC171-205ENST00000472806 TONSLQ96HA7 1378 aa10.91□□□□□ -0.66
CCDC171-205ENST00000472806 NEUROD1Q13562 356 aa10.9□□□□□ -0.66
CCDC171-205ENST00000472806 MICALL2Q8IY33 904 aa10.9□□□□□ -0.66
CCDC171-205ENST00000472806 DNMT1P26358 1616 aaKnown RBP10.9□□□□□ -0.66
CCDC171-205ENST00000472806 DAPK1P53355 1430 aa10.89□□□□□ -0.67
CCDC171-205ENST00000472806 ABCA8O94911 1581 aa10.89□□□□□ -0.67
CCDC171-205ENST00000472806 PPP1R15AO75807 674 aaPredicted RBP10.87□□□□□ -0.67
CCDC171-205ENST00000472806 SIN3AQ96ST3 1273 aa10.87□□□□□ -0.67
CCDC171-205ENST00000472806 PLB1Q6P1J6 1458 aa10.87□□□□□ -0.67
CCDC171-205ENST00000472806 PLEKHD1A6NEE1 506 aa10.86□□□□□ -0.67
CCDC171-205ENST00000472806 VGFO15240 615 aaPredicted RBP10.86□□□□□ -0.67
CCDC171-205ENST00000472806 KIF14Q15058 1648 aa10.86□□□□□ -0.67
CCDC171-205ENST00000472806 RRP7BPQ9NSQ0 103 aa10.85□□□□□ -0.67
CCDC171-205ENST00000472806 CFDP1Q9UEE9 299 aaPredicted RBP10.85□□□□□ -0.67
CCDC171-205ENST00000472806 ABCC5O15440 1437 aa10.84□□□□□ -0.67
CCDC171-205ENST00000472806 ARID3CA6NKF2 412 aa10.84□□□□□ -0.67
CCDC171-205ENST00000472806 TRIM52Q96A61 297 aa10.84□□□□□ -0.67
CCDC171-205ENST00000472806 CHIC2Q9UKJ5 165 aa10.84□□□□□ -0.67
CCDC171-205ENST00000472806 CAMSAP2Q08AD1 1489 aa10.84□□□□□ -0.67
CCDC171-205ENST00000472806 ADGBQ8N7X0 1667 aa10.84□□□□□ -0.67
CCDC171-205ENST00000472806 GPATCH8Q9UKJ3 1502 aaKnown RBP10.84□□□□□ -0.67
CCDC171-205ENST00000472806 PRG4Q92954 1404 aaPredicted RBP10.84□□□□□ -0.67
CCDC171-205ENST00000472806 SOX12O15370 315 aa10.83□□□□□ -0.68
CCDC171-205ENST00000472806 PTPRGP23470 1445 aa10.83□□□□□ -0.68
CCDC171-205ENST00000472806 ADGRL2O95490 1459 aa10.82□□□□□ -0.68
CCDC171-205ENST00000472806 HOXB1P14653 301 aaPredicted RBP10.82□□□□□ -0.68
CCDC171-205ENST00000472806 BCL11BQ9C0K0 894 aaPredicted RBP10.82□□□□□ -0.68
CCDC171-205ENST00000472806 ZNF710Q8N1W2 664 aa10.81□□□□□ -0.68
CCDC171-205ENST00000472806 CHD1O14646 1710 aa10.81□□□□□ -0.68
CCDC171-205ENST00000472806 ATP10BO94823 1461 aa10.81□□□□□ -0.68
CCDC171-205ENST00000472806 SHANK2Q9UPX8 1470 aa10.81□□□□□ -0.68
CCDC171-205ENST00000472806 SHROOM2Q13796 1616 aa10.8□□□□□ -0.68
CCDC171-205ENST00000472806 ANKRD30AQ9BXX3 1397 aa10.8□□□□□ -0.68
CCDC171-205ENST00000472806 CROCC2H7BZ55 1655 aa10.8□□□□□ -0.68
CCDC171-205ENST00000472806 FBXO22Q8NEZ5 403 aa10.8□□□□□ -0.68
CCDC171-205ENST00000472806 MPHOSPH9Q99550 1183 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms