RNA–Protein interactions for RNA: ENST00000472756.1

VPS45-206, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 352 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-206ENST00000472756 ZFRQ96KR1 1074 aaKnown RBP7.21□□□□□ -1.26
VPS45-206ENST00000472756 WBP1LQ9NX94 342 aa7.21□□□□□ -1.26
VPS45-206ENST00000472756 TRAF7Q6Q0C0 670 aa7.2□□□□□ -1.26
VPS45-206ENST00000472756 MFSD10Q14728 455 aa7.18□□□□□ -1.26
VPS45-206ENST00000472756 PDE4AP27815 886 aa7.17□□□□□ -1.26
VPS45-206ENST00000472756 EMILIN3Q9NT22 766 aa7.17□□□□□ -1.26
VPS45-206ENST00000472756 KIAA1468Q9P260 1216 aa7.17□□□□□ -1.26
VPS45-206ENST00000472756 GFRA3O60609 400 aa7.15□□□□□ -1.26
VPS45-206ENST00000472756 FBXW7Q969H0 707 aa7.15□□□□□ -1.26
VPS45-206ENST00000472756 PHF14O94880 888 aa7.14□□□□□ -1.27
VPS45-206ENST00000472756 NRG2O14511 850 aaPredicted RBP7.13□□□□□ -1.27
VPS45-206ENST00000472756 TYW1BQ6NUM6 668 aa7.13□□□□□ -1.27
VPS45-206ENST00000472756 TSR3Q9UJK0 312 aaKnown RBP7.13□□□□□ -1.27
VPS45-206ENST00000472756 FAM98CQ17RN3 349 aaKnown RBP7.12□□□□□ -1.27
VPS45-206ENST00000472756 TJAP1Q5JTD0 557 aa7.12□□□□□ -1.27
VPS45-206ENST00000472756 TRIM6-TRIM34B2RNG4 842 aa7.11□□□□□ -1.27
VPS45-206ENST00000472756 MAP3K9P80192 1104 aa7.11□□□□□ -1.27
VPS45-206ENST00000472756 C6orf132Q5T0Z8 1188 aa7.11□□□□□ -1.27
VPS45-206ENST00000472756 RYDENQ9NUL5 291 aaKnown RBP7.11□□□□□ -1.27
VPS45-206ENST00000472756 DDX27Q96GQ7 796 aaKnown RBP7.1□□□□□ -1.27
VPS45-206ENST00000472756 SEPT9Q9UHD8 586 aaPredicted RBP7.1□□□□□ -1.27
VPS45-206ENST00000472756 LARP6Q9BRS8 491 aaKnown RBP7.09□□□□□ -1.27
VPS45-206ENST00000472756 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.09□□□□□ -1.27
VPS45-206ENST00000472756 V9GY48 417 aaPredicted RBP7.09□□□□□ -1.27
VPS45-206ENST00000472756 CHGAP10645 457 aaKnown RBP7.08□□□□□ -1.28
VPS45-206ENST00000472756 PRKD2Q9BZL6 878 aa7.08□□□□□ -1.28
VPS45-206ENST00000472756 HPS5Q9UPZ3 1129 aa7.08□□□□□ -1.28
VPS45-206ENST00000472756 GTPBP6O43824 516 aaPredicted RBP7.07□□□□□ -1.28
VPS45-206ENST00000472756 EPAS1Q99814 870 aa7.07□□□□□ -1.28
VPS45-206ENST00000472756 LRCH3Q96II8 777 aa7.06□□□□□ -1.28
VPS45-206ENST00000472756 CAMK2BQ13554 666 aa7.05□□□□□ -1.28
VPS45-206ENST00000472756 ZNF775Q96BV0 537 aaPredicted RBP7.05□□□□□ -1.28
VPS45-206ENST00000472756 PPP1R18Q6NYC8 613 aa7.04□□□□□ -1.28
VPS45-206ENST00000472756 TSKSQ9UJT2 592 aa7.04□□□□□ -1.28
VPS45-206ENST00000472756 ZNF787Q6DD87 383 aa7.03□□□□□ -1.28
VPS45-206ENST00000472756 MTRQ99707 1265 aa7□□□□□ -1.29
VPS45-206ENST00000472756 IL21Q9HBE4 155 aa7□□□□□ -1.29
VPS45-206ENST00000472756 PPP4CP60510 307 aa6.99□□□□□ -1.29
VPS45-206ENST00000472756 LCE2AQ5TA79 106 aaPredicted RBP6.99□□□□□ -1.29
VPS45-206ENST00000472756 CADPS2Q86UW7 1296 aa6.99□□□□□ -1.29
VPS45-206ENST00000472756 ZNF516Q92618 1163 aa6.99□□□□□ -1.29
VPS45-206ENST00000472756 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.99□□□□□ -1.29
VPS45-206ENST00000472756 FAM198AQ9UFP1 575 aa6.99□□□□□ -1.29
VPS45-206ENST00000472756 C3orf80F5H4A9 247 aa6.98□□□□□ -1.29
VPS45-206ENST00000472756 TRIM67Q6ZTA4 783 aa6.98□□□□□ -1.29
VPS45-206ENST00000472756 PACS2Q86VP3 889 aa6.97□□□□□ -1.29
VPS45-206ENST00000472756 PDZRN3Q9UPQ7 1066 aa6.97□□□□□ -1.29
VPS45-206ENST00000472756 EN1Q05925 392 aaPredicted RBP6.96□□□□□ -1.3
VPS45-206ENST00000472756 SAMD7Q7Z3H4 446 aa6.96□□□□□ -1.3
VPS45-206ENST00000472756 TSR1Q2NL82 804 aaKnown RBP6.95□□□□□ -1.3
VPS45-206ENST00000472756 EMID1Q96A84 441 aaPredicted RBP6.95□□□□□ -1.3
VPS45-206ENST00000472756 DPYSL4O14531 572 aa6.94□□□□□ -1.3
VPS45-206ENST00000472756 NKX2-3Q8TAU0 364 aa6.94□□□□□ -1.3
VPS45-206ENST00000472756 RBM33Q96EV2 1170 aaKnown RBP6.94□□□□□ -1.3
VPS45-206ENST00000472756 APLP1P51693 650 aa6.93□□□□□ -1.3
VPS45-206ENST00000472756 TMUB1Q9BVT8 246 aa6.93□□□□□ -1.3
VPS45-206ENST00000472756 PRSS12P56730 875 aa6.92□□□□□ -1.3
VPS45-206ENST00000472756 DDX12PQ92771 950 aa6.92□□□□□ -1.3
VPS45-206ENST00000472756 CDCA7LQ96GN5 454 aa6.92□□□□□ -1.3
VPS45-206ENST00000472756 POTECB2RU33 542 aa6.91□□□□□ -1.3
VPS45-206ENST00000472756 SMAPO00193 183 aa6.91□□□□□ -1.3
VPS45-206ENST00000472756 PRIM1P49642 420 aaKnown RBP6.91□□□□□ -1.3
VPS45-206ENST00000472756 MYT1Q01538 1121 aa6.91□□□□□ -1.3
VPS45-206ENST00000472756 TATDN2Q93075 761 aa6.9□□□□□ -1.3
VPS45-206ENST00000472756 PDIA6Q15084 440 aa6.89□□□□□ -1.31
VPS45-206ENST00000472756 PRR20EP86478 221 aa6.88□□□□□ -1.31
VPS45-206ENST00000472756 PRR20CP86479 221 aa6.88□□□□□ -1.31
VPS45-206ENST00000472756 PRR20DP86480 221 aa6.88□□□□□ -1.31
VPS45-206ENST00000472756 PRR20BP86481 221 aa6.88□□□□□ -1.31
VPS45-206ENST00000472756 PRR20AP86496 221 aa6.88□□□□□ -1.31
VPS45-206ENST00000472756 CERKQ8TCT0 537 aa6.88□□□□□ -1.31
VPS45-206ENST00000472756 MAP3K7O43318 606 aa6.87□□□□□ -1.31
VPS45-206ENST00000472756 DGAT1O75907 488 aa6.87□□□□□ -1.31
VPS45-206ENST00000472756 NBR1Q14596 966 aa6.87□□□□□ -1.31
VPS45-206ENST00000472756 TREML4Q6UXN2 200 aa6.86□□□□□ -1.31
VPS45-206ENST00000472756 TTC13Q8NBP0 860 aa6.86□□□□□ -1.31
VPS45-206ENST00000472756 RBM27Q9P2N5 1060 aaKnown RBP6.86□□□□□ -1.31
VPS45-206ENST00000472756 NBPF26B4DH59 902 aa6.84□□□□□ -1.31
VPS45-206ENST00000472756 RNF223E7ERA6 249 aa6.84□□□□□ -1.31
VPS45-206ENST00000472756 ZPR1O75312 459 aa6.84□□□□□ -1.31
VPS45-206ENST00000472756 GGCXP38435 758 aa6.84□□□□□ -1.31
VPS45-206ENST00000472756 SPRYD7Q5W111 196 aa6.84□□□□□ -1.31
VPS45-206ENST00000472756 PNMA3Q9UL41 463 aa6.84□□□□□ -1.31
VPS45-206ENST00000472756 SPDYE16A6NNV3 312 aaPredicted RBP6.82□□□□□ -1.32
VPS45-206ENST00000472756 GDF9O60383 454 aa6.82□□□□□ -1.32
VPS45-206ENST00000472756 SLC19A1P41440 591 aa6.82□□□□□ -1.32
VPS45-206ENST00000472756 NUDT18Q6ZVK8 323 aa6.82□□□□□ -1.32
VPS45-206ENST00000472756 ZNF598Q86UK7 904 aaKnown RBP6.82□□□□□ -1.32
VPS45-206ENST00000472756 ARIH1Q9Y4X5 557 aaPredicted RBP6.82□□□□□ -1.32
VPS45-206ENST00000472756 NECTIN2Q92692 538 aa6.81□□□□□ -1.32
VPS45-206ENST00000472756 COPS2P61201 443 aa6.8□□□□□ -1.32
VPS45-206ENST00000472756 PKDCCQ504Y2 493 aa6.8□□□□□ -1.32
VPS45-206ENST00000472756 OSBPP22059 807 aa6.79□□□□□ -1.32
VPS45-206ENST00000472756 SWT1Q5T5J6 900 aaKnown RBP6.79□□□□□ -1.32
VPS45-206ENST00000472756 LIAT1Q6ZQX7 453 aa6.79□□□□□ -1.32
VPS45-206ENST00000472756 ANKLE1Q8NAG6 615 aa6.79□□□□□ -1.32
VPS45-206ENST00000472756 NPDC1Q9NQX5 325 aaPredicted RBP6.79□□□□□ -1.32
VPS45-206ENST00000472756 EYA1Q99502 592 aa6.78□□□□□ -1.32
VPS45-206ENST00000472756 CDHR5Q9HBB8 845 aa6.78□□□□□ -1.32
VPS45-206ENST00000472756 AAASQ9NRG9 546 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms