RNA–Protein interactions for RNA: ENST00000472170.1

TSPAN1-205, Transcript of tetraspanin 1, humanhuman

TSL 3

Gene TSPAN1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-205ENST00000472170 KANK1Q14678 1352 aa12.78□□□□□ -0.36
TSPAN1-205ENST00000472170 DUOX2Q9NRD8 1548 aa12.77□□□□□ -0.37
TSPAN1-205ENST00000472170 CERKQ8TCT0 537 aa12.76□□□□□ -0.37
TSPAN1-205ENST00000472170 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.76□□□□□ -0.37
TSPAN1-205ENST00000472170 KIF15Q9NS87 1388 aa12.76□□□□□ -0.37
TSPAN1-205ENST00000472170 DAPK1P53355 1430 aa12.76□□□□□ -0.37
TSPAN1-205ENST00000472170 FAM135AQ9P2D6 1515 aa12.76□□□□□ -0.37
TSPAN1-205ENST00000472170 ABCC5O15440 1437 aa12.75□□□□□ -0.37
TSPAN1-205ENST00000472170 TCOF1Q13428 1488 aaKnown RBP12.75□□□□□ -0.37
TSPAN1-205ENST00000472170 SHANK2Q9UPX8 1470 aa12.75□□□□□ -0.37
TSPAN1-205ENST00000472170 PPARGC1BQ86YN6 1023 aaKnown RBP12.74□□□□□ -0.37
TSPAN1-205ENST00000472170 THEMISQ8N1K5 641 aaPredicted RBP12.74□□□□□ -0.37
TSPAN1-205ENST00000472170 KDM5DQ9BY66 1539 aa12.73□□□□□ -0.37
TSPAN1-205ENST00000472170 PKD2Q13563 968 aa12.73□□□□□ -0.37
TSPAN1-205ENST00000472170 DNMT1P26358 1616 aaKnown RBP12.73□□□□□ -0.37
TSPAN1-205ENST00000472170 PTPRKQ15262 1439 aa12.72□□□□□ -0.37
TSPAN1-205ENST00000472170 EIF2AK4Q9P2K8 1649 aaKnown RBP12.72□□□□□ -0.37
TSPAN1-205ENST00000472170 ERBINQ96RT1 1412 aa12.71□□□□□ -0.37
TSPAN1-205ENST00000472170 TNRQ92752 1358 aa12.71□□□□□ -0.37
TSPAN1-205ENST00000472170 ITGAEP38570 1179 aa12.71□□□□□ -0.37
TSPAN1-205ENST00000472170 FBXO31Q5XUX0 539 aaPredicted RBP12.71□□□□□ -0.37
TSPAN1-205ENST00000472170 STAG3Q9UJ98 1225 aa12.7□□□□□ -0.38
TSPAN1-205ENST00000472170 ANKLE2Q86XL3 938 aa12.69□□□□□ -0.38
TSPAN1-205ENST00000472170 CROCC2H7BZ55 1655 aa12.69□□□□□ -0.38
TSPAN1-205ENST00000472170 NCOA1Q15788 1441 aa12.69□□□□□ -0.38
TSPAN1-205ENST00000472170 DISP3Q9P2K9 1392 aa12.69□□□□□ -0.38
TSPAN1-205ENST00000472170 PZPP20742 1482 aa12.68□□□□□ -0.38
TSPAN1-205ENST00000472170 ILDR2Q71H61 639 aa12.68□□□□□ -0.38
TSPAN1-205ENST00000472170 CFAP65Q6ZU64 1925 aaKnown RBP12.68□□□□□ -0.38
TSPAN1-205ENST00000472170 ZC3H13Q5T200 1668 aaKnown RBP12.67□□□□□ -0.38
TSPAN1-205ENST00000472170 PTPRTO14522 1441 aa12.67□□□□□ -0.38
TSPAN1-205ENST00000472170 RNF17Q9BXT8 1623 aaKnown RBP12.66□□□□□ -0.38
TSPAN1-205ENST00000472170 A2ML1A8K2U0 1454 aa12.66□□□□□ -0.38
TSPAN1-205ENST00000472170 NCKAP5LQ9HCH0 1330 aa12.66□□□□□ -0.38
TSPAN1-205ENST00000472170 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.66□□□□□ -0.38
TSPAN1-205ENST00000472170 CAMSAP1Q5T5Y3 1602 aa12.66□□□□□ -0.38
TSPAN1-205ENST00000472170 NLRP1Q9C000 1473 aa12.65□□□□□ -0.38
TSPAN1-205ENST00000472170 ANKRD50Q9ULJ7 1429 aa12.65□□□□□ -0.38
TSPAN1-205ENST00000472170 CEP170BQ9Y4F5 1589 aaPredicted RBP12.64□□□□□ -0.39
TSPAN1-205ENST00000472170 MYO3AQ8NEV4 1616 aa12.64□□□□□ -0.39
TSPAN1-205ENST00000472170 STRCQ7RTU9 1775 aa12.64□□□□□ -0.39
TSPAN1-205ENST00000472170 ABCC3O15438 1527 aa12.63□□□□□ -0.39
TSPAN1-205ENST00000472170 HDGFP51858 240 aaKnown RBP12.63□□□□□ -0.39
TSPAN1-205ENST00000472170 EID1Q9Y6B2 187 aa12.63□□□□□ -0.39
TSPAN1-205ENST00000472170 ROCK1Q13464 1354 aa12.63□□□□□ -0.39
TSPAN1-205ENST00000472170 ADGRL2O95490 1459 aa12.63□□□□□ -0.39
TSPAN1-205ENST00000472170 PLA2R1Q13018 1463 aa12.63□□□□□ -0.39
TSPAN1-205ENST00000472170 SOCS7O14512 581 aa12.62□□□□□ -0.39
TSPAN1-205ENST00000472170 ARHGAP31Q2M1Z3 1444 aa12.62□□□□□ -0.39
TSPAN1-205ENST00000472170 ZNF142P52746 1687 aaPredicted RBP12.61□□□□□ -0.39
TSPAN1-205ENST00000472170 SLC52A1Q9NWF4 448 aa12.61□□□□□ -0.39
TSPAN1-205ENST00000472170 UGGT1Q9NYU2 1555 aa12.6□□□□□ -0.39
TSPAN1-205ENST00000472170 CEP152O94986 1710 aa12.6□□□□□ -0.39
TSPAN1-205ENST00000472170 PRDM15P57071 1507 aaPredicted RBP12.59□□□□□ -0.39
TSPAN1-205ENST00000472170 ERVK-7P63135 1459 aa12.59□□□□□ -0.39
TSPAN1-205ENST00000472170 TXNDC2Q86VQ3 553 aa12.58□□□□□ -0.4
TSPAN1-205ENST00000472170 SPATA31D1Q6ZQQ2 1576 aa12.57□□□□□ -0.4
TSPAN1-205ENST00000472170 BCANQ96GW7 911 aa12.57□□□□□ -0.4
TSPAN1-205ENST00000472170 DEPDC5O75140 1603 aa12.57□□□□□ -0.4
TSPAN1-205ENST00000472170 NUP155O75694 1391 aa12.56□□□□□ -0.4
TSPAN1-205ENST00000472170 MROH1Q8NDA8 1641 aa12.56□□□□□ -0.4
TSPAN1-205ENST00000472170 CHGAP10645 457 aaKnown RBP12.55□□□□□ -0.4
TSPAN1-205ENST00000472170 IDI1Q13907 227 aa12.55□□□□□ -0.4
TSPAN1-205ENST00000472170 TRIM52Q96A61 297 aa12.55□□□□□ -0.4
TSPAN1-205ENST00000472170 LMTK2Q8IWU2 1503 aa12.55□□□□□ -0.4
TSPAN1-205ENST00000472170 RRBP1Q9P2E9 1410 aaKnown RBP12.54□□□□□ -0.4
TSPAN1-205ENST00000472170 ACIN1Q9UKV3 1341 aaKnown RBP12.54□□□□□ -0.4
TSPAN1-205ENST00000472170 RPRD2Q5VT52 1461 aaKnown RBP12.53□□□□□ -0.4
TSPAN1-205ENST00000472170 NPHP4O75161 1426 aaPredicted RBP12.53□□□□□ -0.4
TSPAN1-205ENST00000472170 POLR1AO95602 1720 aaPredicted RBP12.52□□□□□ -0.41
TSPAN1-205ENST00000472170 PPP1R15AO75807 674 aaPredicted RBP12.52□□□□□ -0.41
TSPAN1-205ENST00000472170 ZNF335Q9H4Z2 1342 aaPredicted RBP12.52□□□□□ -0.41
TSPAN1-205ENST00000472170 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.51□□□□□ -0.41
TSPAN1-205ENST00000472170 VWDEQ8N2E2 1590 aa12.51□□□□□ -0.41
TSPAN1-205ENST00000472170 TOM1O60784 492 aa12.5□□□□□ -0.41
TSPAN1-205ENST00000472170 TET3O43151 1660 aa12.49□□□□□ -0.41
TSPAN1-205ENST00000472170 EFCAB6Q5THR3 1501 aa12.49□□□□□ -0.41
TSPAN1-205ENST00000472170 MED14O60244 1454 aa12.49□□□□□ -0.41
TSPAN1-205ENST00000472170 IQSEC2Q5JU85 1478 aa12.49□□□□□ -0.41
TSPAN1-205ENST00000472170 TMEM2Q9UHN6 1383 aa12.49□□□□□ -0.41
TSPAN1-205ENST00000472170 UBAP1LF5GYI3 381 aa12.49□□□□□ -0.41
TSPAN1-205ENST00000472170 UBR1Q8IWV7 1749 aa12.48□□□□□ -0.41
TSPAN1-205ENST00000472170 GCC2Q8IWJ2 1684 aa12.48□□□□□ -0.41
TSPAN1-205ENST00000472170 SCAF11Q99590 1463 aaKnown RBP12.48□□□□□ -0.41
TSPAN1-205ENST00000472170 UNC13BO14795 1591 aa12.47□□□□□ -0.41
TSPAN1-205ENST00000472170 NOS1P29475 1434 aa12.47□□□□□ -0.41
TSPAN1-205ENST00000472170 LTKP29376 864 aa12.47□□□□□ -0.41
TSPAN1-205ENST00000472170 KDM5AP29375 1690 aaKnown RBP12.46□□□□□ -0.41
TSPAN1-205ENST00000472170 IQGAP1P46940 1657 aa12.46□□□□□ -0.41
TSPAN1-205ENST00000472170 ZNF326Q5BKZ1 582 aaKnown RBP12.46□□□□□ -0.41
TSPAN1-205ENST00000472170 SLC4A1APQ9BWU0 796 aaKnown RBP12.46□□□□□ -0.41
TSPAN1-205ENST00000472170 PIK3C2BO00750 1634 aa12.46□□□□□ -0.41
TSPAN1-205ENST00000472170 CPS1P31327 1500 aa12.46□□□□□ -0.42
TSPAN1-205ENST00000472170 LTBP4Q8N2S1 1624 aa12.45□□□□□ -0.42
TSPAN1-205ENST00000472170 SCAF1Q9H7N4 1312 aaKnown RBP12.45□□□□□ -0.42
TSPAN1-205ENST00000472170 SLIT1O75093 1534 aa12.45□□□□□ -0.42
TSPAN1-205ENST00000472170 IQGAP3Q86VI3 1631 aa12.44□□□□□ -0.42
TSPAN1-205ENST00000472170 ARHGAP23Q9P227 1491 aa12.43□□□□□ -0.42
TSPAN1-205ENST00000472170 HFM1A2PYH4 1435 aa12.43□□□□□ -0.42
TSPAN1-205ENST00000472170 NAIPQ13075 1403 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms