RNA–Protein interactions for RNA: ENST00000471799.1

SRRD-202, Transcript of SRR1 domain containing, humanhuman

TSL 2

Gene SRRD, Length 668 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRD-202ENST00000471799 PDE4DQ08499 809 aa11.4□□□□□ -0.58
SRRD-202ENST00000471799 ZNF454Q8N9F8 522 aa11.4□□□□□ -0.58
SRRD-202ENST00000471799 LHX6Q9UPM6 363 aa11.4□□□□□ -0.58
SRRD-202ENST00000471799 RIMBP2O15034 1052 aa11.39□□□□□ -0.59
SRRD-202ENST00000471799 FBXW7Q969H0 707 aa11.39□□□□□ -0.59
SRRD-202ENST00000471799 ADAM33Q9BZ11 813 aa11.39□□□□□ -0.59
SRRD-202ENST00000471799 ZDHHC16Q969W1 377 aa11.38□□□□□ -0.59
SRRD-202ENST00000471799 ZNF710Q8N1W2 664 aa11.37□□□□□ -0.59
SRRD-202ENST00000471799 C6orf132Q5T0Z8 1188 aa11.36□□□□□ -0.59
SRRD-202ENST00000471799 HOXB1P14653 301 aaPredicted RBP11.35□□□□□ -0.59
SRRD-202ENST00000471799 AMHR2Q16671 573 aa11.35□□□□□ -0.59
SRRD-202ENST00000471799 KDM4CQ9H3R0 1056 aa11.35□□□□□ -0.59
SRRD-202ENST00000471799 LHX8Q68G74 356 aa11.32□□□□□ -0.6
SRRD-202ENST00000471799 PARP9Q8IXQ6 854 aa11.32□□□□□ -0.6
SRRD-202ENST00000471799 PHOX2BQ99453 314 aa11.31□□□□□ -0.6
SRRD-202ENST00000471799 SNPHO15079 494 aa11.3□□□□□ -0.6
SRRD-202ENST00000471799 FAM161AQ3B820 660 aa11.3□□□□□ -0.6
SRRD-202ENST00000471799 PADI6Q6TGC4 694 aa11.3□□□□□ -0.6
SRRD-202ENST00000471799 COL9A1P20849 921 aa11.29□□□□□ -0.6
SRRD-202ENST00000471799 TTC13Q8NBP0 860 aa11.29□□□□□ -0.6
SRRD-202ENST00000471799 REPIN1Q9BWE0 567 aaKnown RBP11.29□□□□□ -0.6
SRRD-202ENST00000471799 BCL2L12Q9HB09 334 aa11.27□□□□□ -0.61
SRRD-202ENST00000471799 FAM198AQ9UFP1 575 aa11.27□□□□□ -0.61
SRRD-202ENST00000471799 PPP4R3BQ5MIZ7 849 aa11.26□□□□□ -0.61
SRRD-202ENST00000471799 CERKQ8TCT0 537 aa11.26□□□□□ -0.61
SRRD-202ENST00000471799 FAM117AQ9C073 453 aa11.25□□□□□ -0.61
SRRD-202ENST00000471799 GTF3C3Q9Y5Q9 886 aa11.25□□□□□ -0.61
SRRD-202ENST00000471799 ADGRG1Q9Y653 693 aa11.25□□□□□ -0.61
SRRD-202ENST00000471799 PRSS12P56730 875 aa11.24□□□□□ -0.61
SRRD-202ENST00000471799 IL27Q8NEV9 243 aa11.24□□□□□ -0.61
SRRD-202ENST00000471799 TMUB1Q9BVT8 246 aa11.24□□□□□ -0.61
SRRD-202ENST00000471799 RBM27Q9P2N5 1060 aaKnown RBP11.24□□□□□ -0.61
SRRD-202ENST00000471799 PSDA5PKW4 1024 aaPredicted RBP11.23□□□□□ -0.61
SRRD-202ENST00000471799 METTL3Q86U44 580 aaKnown RBP11.23□□□□□ -0.61
SRRD-202ENST00000471799 CDCA7LQ96GN5 454 aa11.23□□□□□ -0.61
SRRD-202ENST00000471799 PLEKHG3A1L390 1219 aa11.22□□□□□ -0.61
SRRD-202ENST00000471799 C3orf80F5H4A9 247 aa11.22□□□□□ -0.61
SRRD-202ENST00000471799 NLRP7Q8WX94 980 aa11.22□□□□□ -0.61
SRRD-202ENST00000471799 MS4A1P11836 297 aa11.21□□□□□ -0.61
SRRD-202ENST00000471799 TTLL12Q14166 644 aaPredicted RBP11.21□□□□□ -0.61
SRRD-202ENST00000471799 GIGYF2Q6Y7W6 1299 aaKnown RBP11.21□□□□□ -0.61
SRRD-202ENST00000471799 PPP1R3GB7ZBB8 358 aa11.2□□□□□ -0.62
SRRD-202ENST00000471799 PXYLP1Q8TE99 480 aa11.2□□□□□ -0.62
SRRD-202ENST00000471799 TSKSQ9UJT2 592 aa11.2□□□□□ -0.62
SRRD-202ENST00000471799 MDM2Q00987 491 aaPredicted RBP11.19□□□□□ -0.62
SRRD-202ENST00000471799 POTEEQ6S8J3 1075 aa11.19□□□□□ -0.62
SRRD-202ENST00000471799 ST18O60284 1047 aa11.18□□□□□ -0.62
SRRD-202ENST00000471799 PTPREP23469 700 aa11.18□□□□□ -0.62
SRRD-202ENST00000471799 OATP04181 439 aa11.15□□□□□ -0.62
SRRD-202ENST00000471799 PROX2Q3B8N5 592 aa11.15□□□□□ -0.62
SRRD-202ENST00000471799 KCNK17Q96T54 332 aa11.15□□□□□ -0.62
SRRD-202ENST00000471799 GPCPD1Q9NPB8 672 aa11.15□□□□□ -0.62
SRRD-202ENST00000471799 TIMELESSQ9UNS1 1208 aa11.15□□□□□ -0.62
SRRD-202ENST00000471799 CLCN1P35523 988 aa11.13□□□□□ -0.63
SRRD-202ENST00000471799 VARS2Q5ST30 1063 aaKnown RBP11.13□□□□□ -0.63
SRRD-202ENST00000471799 MARVELD3Q96A59 401 aa11.13□□□□□ -0.63
SRRD-202ENST00000471799 EYA1Q99502 592 aa11.13□□□□□ -0.63
SRRD-202ENST00000471799 TRIM6-TRIM34B2RNG4 842 aa11.12□□□□□ -0.63
SRRD-202ENST00000471799 PSEN2P49810 448 aa11.12□□□□□ -0.63
SRRD-202ENST00000471799 LCE2DQ5TA82 110 aaPredicted RBP11.12□□□□□ -0.63
SRRD-202ENST00000471799 DDRGK1Q96HY6 314 aa11.11□□□□□ -0.63
SRRD-202ENST00000471799 FAM217BQ9NTX9 383 aaPredicted RBP11.11□□□□□ -0.63
SRRD-202ENST00000471799 ERBB3P21860 1342 aa11.1□□□□□ -0.63
SRRD-202ENST00000471799 POTEB3A0JP26 581 aa11.1□□□□□ -0.63
SRRD-202ENST00000471799 POTEBQ6S5H4 581 aa11.1□□□□□ -0.63
SRRD-202ENST00000471799 ZBED2Q9BTP6 218 aa11.1□□□□□ -0.63
SRRD-202ENST00000471799 SSTR3P32745 418 aaPredicted RBP11.09□□□□□ -0.63
SRRD-202ENST00000471799 NUDT18Q6ZVK8 323 aa11.09□□□□□ -0.63
SRRD-202ENST00000471799 RBM46Q8TBY0 533 aaKnown RBP11.09□□□□□ -0.63
SRRD-202ENST00000471799 RCCD1A6NED2 376 aa11.08□□□□□ -0.64
SRRD-202ENST00000471799 DMRTA1Q5VZB9 504 aa11.08□□□□□ -0.64
SRRD-202ENST00000471799 TATDN2Q93075 761 aa11.08□□□□□ -0.64
SRRD-202ENST00000471799 AXIN2Q9Y2T1 843 aa11.08□□□□□ -0.64
SRRD-202ENST00000471799 SMAPO00193 183 aa11.07□□□□□ -0.64
SRRD-202ENST00000471799 EMP3P54852 163 aa11.07□□□□□ -0.64
SRRD-202ENST00000471799 PNMA3Q9UL41 463 aa11.06□□□□□ -0.64
SRRD-202ENST00000471799 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.05□□□□□ -0.64
SRRD-202ENST00000471799 DAXXQ9UER7 740 aaPredicted RBP11.05□□□□□ -0.64
SRRD-202ENST00000471799 FAM205CA6NFA0 338 aa11.04□□□□□ -0.64
SRRD-202ENST00000471799 NBPF26B4DH59 902 aa11.04□□□□□ -0.64
SRRD-202ENST00000471799 ARHGAP33O14559 1287 aa11.04□□□□□ -0.64
SRRD-202ENST00000471799 ONECUT3O60422 494 aaPredicted RBP11.03□□□□□ -0.64
SRRD-202ENST00000471799 FAM163AQ96GL9 167 aaPredicted RBP11.03□□□□□ -0.64
SRRD-202ENST00000471799 BEGAINQ9BUH8 593 aa11.03□□□□□ -0.64
SRRD-202ENST00000471799 KIAA1468Q9P260 1216 aa11.03□□□□□ -0.64
SRRD-202ENST00000471799 PACS2Q86VP3 889 aa11.02□□□□□ -0.65
SRRD-202ENST00000471799 ZNF687Q8N1G0 1237 aa11.02□□□□□ -0.65
SRRD-202ENST00000471799 HS3ST6Q96QI5 342 aa11.01□□□□□ -0.65
SRRD-202ENST00000471799 TMEM134Q9H6X4 195 aa11.01□□□□□ -0.65
SRRD-202ENST00000471799 DNAJB2P25686 324 aa11□□□□□ -0.65
SRRD-202ENST00000471799 SLC4A5Q9BY07 1137 aa11□□□□□ -0.65
SRRD-202ENST00000471799 GOPCQ9HD26 462 aa11□□□□□ -0.65
SRRD-202ENST00000471799 SH3D19Q5HYK7 790 aa10.99□□□□□ -0.65
SRRD-202ENST00000471799 CD46P15529 392 aa10.98□□□□□ -0.65
SRRD-202ENST00000471799 PBX2P40425 430 aa10.98□□□□□ -0.65
SRRD-202ENST00000471799 KCNH8Q96L42 1107 aa10.98□□□□□ -0.65
SRRD-202ENST00000471799 RABGEF1Q9UJ41 708 aa10.98□□□□□ -0.65
SRRD-202ENST00000471799 VPS9D1Q9Y2B5 631 aa10.98□□□□□ -0.65
SRRD-202ENST00000471799 SEPT9Q9UHD8 586 aaPredicted RBP10.97□□□□□ -0.65
SRRD-202ENST00000471799 MYSM1Q5VVJ2 828 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms