RNA–Protein interactions for RNA: ENST00000471459.1

HOXB3-206, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-206ENST00000471459 CHIC2Q9UKJ5 165 aa22.97■■□□□ 1.27
HOXB3-206ENST00000471459 FBXO41Q8TF61 875 aa22.96■■□□□ 1.27
HOXB3-206ENST00000471459 KIF15Q9NS87 1388 aa22.96■■□□□ 1.27
HOXB3-206ENST00000471459 KDM5DQ9BY66 1539 aa22.96■■□□□ 1.27
HOXB3-206ENST00000471459 DAPK1P53355 1430 aa22.95■■□□□ 1.26
HOXB3-206ENST00000471459 TCOF1Q13428 1488 aaKnown RBP22.95■■□□□ 1.26
HOXB3-206ENST00000471459 FBXO31Q5XUX0 539 aaPredicted RBP22.95■■□□□ 1.26
HOXB3-206ENST00000471459 ANKRD30AQ9BXX3 1397 aa22.95■■□□□ 1.26
HOXB3-206ENST00000471459 DUOX2Q9NRD8 1548 aa22.95■■□□□ 1.26
HOXB3-206ENST00000471459 SHANK2Q9UPX8 1470 aa22.95■■□□□ 1.26
HOXB3-206ENST00000471459 TNRQ92752 1358 aa22.92■■□□□ 1.26
HOXB3-206ENST00000471459 PKD2Q13563 968 aa22.91■■□□□ 1.26
HOXB3-206ENST00000471459 CERKQ8TCT0 537 aa22.9■■□□□ 1.26
HOXB3-206ENST00000471459 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.9■■□□□ 1.26
HOXB3-206ENST00000471459 PTPRTO14522 1441 aa22.9■■□□□ 1.26
HOXB3-206ENST00000471459 PZPP20742 1482 aa22.89■■□□□ 1.25
HOXB3-206ENST00000471459 NCOA1Q15788 1441 aa22.88■■□□□ 1.25
HOXB3-206ENST00000471459 ERBINQ96RT1 1412 aa22.88■■□□□ 1.25
HOXB3-206ENST00000471459 KANK1Q14678 1352 aa22.88■■□□□ 1.25
HOXB3-206ENST00000471459 NCKAP5LQ9HCH0 1330 aa22.87■■□□□ 1.25
HOXB3-206ENST00000471459 DNMT1P26358 1616 aaKnown RBP22.87■■□□□ 1.25
HOXB3-206ENST00000471459 EIF2AK4Q9P2K8 1649 aaKnown RBP22.87■■□□□ 1.25
HOXB3-206ENST00000471459 THEMISQ8N1K5 641 aaPredicted RBP22.87■■□□□ 1.25
HOXB3-206ENST00000471459 CAMSAP1Q5T5Y3 1602 aa22.86■■□□□ 1.25
HOXB3-206ENST00000471459 A2ML1A8K2U0 1454 aa22.85■■□□□ 1.25
HOXB3-206ENST00000471459 CEP170BQ9Y4F5 1589 aaPredicted RBP22.84■■□□□ 1.25
HOXB3-206ENST00000471459 STRCQ7RTU9 1775 aa22.84■■□□□ 1.25
HOXB3-206ENST00000471459 RNF17Q9BXT8 1623 aaKnown RBP22.83■■□□□ 1.25
HOXB3-206ENST00000471459 PPARGC1BQ86YN6 1023 aaKnown RBP22.83■■□□□ 1.25
HOXB3-206ENST00000471459 MYO3AQ8NEV4 1616 aa22.82■■□□□ 1.24
HOXB3-206ENST00000471459 ABCC3O15438 1527 aa22.82■■□□□ 1.24
HOXB3-206ENST00000471459 PLA2R1Q13018 1463 aa22.81■■□□□ 1.24
HOXB3-206ENST00000471459 CROCC2H7BZ55 1655 aa22.81■■□□□ 1.24
HOXB3-206ENST00000471459 NLRP1Q9C000 1473 aa22.8■■□□□ 1.24
HOXB3-206ENST00000471459 ANKLE2Q86XL3 938 aa22.8■■□□□ 1.24
HOXB3-206ENST00000471459 ZC3H13Q5T200 1668 aaKnown RBP22.78■■□□□ 1.24
HOXB3-206ENST00000471459 ZNF142P52746 1687 aaPredicted RBP22.77■■□□□ 1.24
HOXB3-206ENST00000471459 ADGRL2O95490 1459 aa22.75■■□□□ 1.23
HOXB3-206ENST00000471459 ITGAEP38570 1179 aa22.75■■□□□ 1.23
HOXB3-206ENST00000471459 ARHGAP31Q2M1Z3 1444 aa22.74■■□□□ 1.23
HOXB3-206ENST00000471459 ANKRD50Q9ULJ7 1429 aa22.74■■□□□ 1.23
HOXB3-206ENST00000471459 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.73■■□□□ 1.23
HOXB3-206ENST00000471459 MROH1Q8NDA8 1641 aa22.72■■□□□ 1.23
HOXB3-206ENST00000471459 STAG3Q9UJ98 1225 aa22.72■■□□□ 1.23
HOXB3-206ENST00000471459 ERVK-7P63135 1459 aa22.72■■□□□ 1.23
HOXB3-206ENST00000471459 PRDM15P57071 1507 aaPredicted RBP22.72■■□□□ 1.23
HOXB3-206ENST00000471459 UGGT1Q9NYU2 1555 aa22.72■■□□□ 1.23
HOXB3-206ENST00000471459 SPATA31D1Q6ZQQ2 1576 aa22.69■■□□□ 1.22
HOXB3-206ENST00000471459 ROCK1Q13464 1354 aa22.68■■□□□ 1.22
HOXB3-206ENST00000471459 ZNF335Q9H4Z2 1342 aaPredicted RBP22.67■■□□□ 1.22
HOXB3-206ENST00000471459 CEP152O94986 1710 aa22.66■■□□□ 1.22
HOXB3-206ENST00000471459 EID1Q9Y6B2 187 aa22.65■■□□□ 1.22
HOXB3-206ENST00000471459 DEPDC5O75140 1603 aa22.64■■□□□ 1.22
HOXB3-206ENST00000471459 LMTK2Q8IWU2 1503 aa22.63■■□□□ 1.21
HOXB3-206ENST00000471459 SLC52A1Q9NWF4 448 aa22.62■■□□□ 1.21
HOXB3-206ENST00000471459 TXNDC2Q86VQ3 553 aa22.61■■□□□ 1.21
HOXB3-206ENST00000471459 NPHP4O75161 1426 aaPredicted RBP22.6■■□□□ 1.21
HOXB3-206ENST00000471459 IDI1Q13907 227 aa22.6■■□□□ 1.21
HOXB3-206ENST00000471459 LTBP4Q8N2S1 1624 aa22.6■■□□□ 1.21
HOXB3-206ENST00000471459 CFAP65Q6ZU64 1925 aaKnown RBP22.59■■□□□ 1.21
HOXB3-206ENST00000471459 VWDEQ8N2E2 1590 aa22.59■■□□□ 1.21
HOXB3-206ENST00000471459 IQSEC2Q5JU85 1478 aa22.58■■□□□ 1.2
HOXB3-206ENST00000471459 MED14O60244 1454 aa22.56■■□□□ 1.2
HOXB3-206ENST00000471459 NUP155O75694 1391 aa22.55■■□□□ 1.2
HOXB3-206ENST00000471459 RPRD2Q5VT52 1461 aaKnown RBP22.54■■□□□ 1.2
HOXB3-206ENST00000471459 UBAP1LF5GYI3 381 aa22.54■■□□□ 1.2
HOXB3-206ENST00000471459 EFCAB6Q5THR3 1501 aa22.53■■□□□ 1.2
HOXB3-206ENST00000471459 HDGFP51858 240 aaKnown RBP22.53■■□□□ 1.2
HOXB3-206ENST00000471459 RRBP1Q9P2E9 1410 aaKnown RBP22.53■■□□□ 1.2
HOXB3-206ENST00000471459 POLR1AO95602 1720 aaPredicted RBP22.53■■□□□ 1.2
HOXB3-206ENST00000471459 NOS1P29475 1434 aa22.52■■□□□ 1.2
HOXB3-206ENST00000471459 LTKP29376 864 aa22.52■■□□□ 1.2
HOXB3-206ENST00000471459 TMEM2Q9UHN6 1383 aa22.51■■□□□ 1.19
HOXB3-206ENST00000471459 NEURL4Q96JN8 1562 aa22.51■■□□□ 1.19
HOXB3-206ENST00000471459 SCAF11Q99590 1463 aaKnown RBP22.51■■□□□ 1.19
HOXB3-206ENST00000471459 BCANQ96GW7 911 aa22.49■■□□□ 1.19
HOXB3-206ENST00000471459 UBR1Q8IWV7 1749 aa22.48■■□□□ 1.19
HOXB3-206ENST00000471459 CPS1P31327 1500 aa22.48■■□□□ 1.19
HOXB3-206ENST00000471459 CHGAP10645 457 aaKnown RBP22.48■■□□□ 1.19
HOXB3-206ENST00000471459 SLIT1O75093 1534 aa22.47■■□□□ 1.19
HOXB3-206ENST00000471459 TOM1O60784 492 aa22.47■■□□□ 1.19
HOXB3-206ENST00000471459 ARHGAP23Q9P227 1491 aa22.47■■□□□ 1.19
HOXB3-206ENST00000471459 UNC13BO14795 1591 aa22.45■■□□□ 1.18
HOXB3-206ENST00000471459 PIK3C2BO00750 1634 aa22.45■■□□□ 1.18
HOXB3-206ENST00000471459 TET3O43151 1660 aa22.45■■□□□ 1.18
HOXB3-206ENST00000471459 PPP1R15AO75807 674 aaPredicted RBP22.44■■□□□ 1.18
HOXB3-206ENST00000471459 IQGAP1P46940 1657 aa22.44■■□□□ 1.18
HOXB3-206ENST00000471459 SYNMO15061 1565 aa22.42■■□□□ 1.18
HOXB3-206ENST00000471459 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.42■■□□□ 1.18
HOXB3-206ENST00000471459 TRIM52Q96A61 297 aa22.41■■□□□ 1.18
HOXB3-206ENST00000471459 KDM5AP29375 1690 aaKnown RBP22.4■■□□□ 1.18
HOXB3-206ENST00000471459 SCAF1Q9H7N4 1312 aaKnown RBP22.4■■□□□ 1.18
HOXB3-206ENST00000471459 GCC2Q8IWJ2 1684 aa22.39■■□□□ 1.17
HOXB3-206ENST00000471459 ADGRB3O60242 1522 aa22.38■■□□□ 1.17
HOXB3-206ENST00000471459 SLC26A8Q96RN1 970 aa22.38■■□□□ 1.17
HOXB3-206ENST00000471459 IQGAP3Q86VI3 1631 aa22.38■■□□□ 1.17
HOXB3-206ENST00000471459 PIP4K2BP78356 416 aa22.37■■□□□ 1.17
HOXB3-206ENST00000471459 NAIPQ13075 1403 aa22.37■■□□□ 1.17
HOXB3-206ENST00000471459 KCNA6P17658 529 aa22.34■■□□□ 1.17
HOXB3-206ENST00000471459 RIMS2Q9UQ26 1411 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms