RNA–Protein interactions for RNA: ENST00000471332.1

CHL1-212, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 5

Gene CHL1, Length 399 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-212ENST00000471332 KDM5CP41229 1560 aa10.51□□□□□ -0.73
CHL1-212ENST00000471332 CD109Q6YHK3 1445 aa10.5□□□□□ -0.73
CHL1-212ENST00000471332 POGZQ7Z3K3 1410 aa10.5□□□□□ -0.73
CHL1-212ENST00000471332 ATP10AO60312 1499 aa10.49□□□□□ -0.73
CHL1-212ENST00000471332 DMRT2Q9Y5R5 561 aa10.49□□□□□ -0.73
CHL1-212ENST00000471332 SCAPERQ9BY12 1400 aa10.49□□□□□ -0.73
CHL1-212ENST00000471332 PRDM15P57071 1507 aaPredicted RBP10.48□□□□□ -0.73
CHL1-212ENST00000471332 MAP3K4Q9Y6R4 1608 aa10.48□□□□□ -0.73
CHL1-212ENST00000471332 PKD2Q13563 968 aa10.48□□□□□ -0.73
CHL1-212ENST00000471332 HECW2Q9P2P5 1572 aa10.48□□□□□ -0.73
CHL1-212ENST00000471332 MLH3Q9UHC1 1453 aa10.47□□□□□ -0.73
CHL1-212ENST00000471332 VWDEQ8N2E2 1590 aa10.47□□□□□ -0.73
CHL1-212ENST00000471332 BCORL1Q5H9F3 1711 aa10.47□□□□□ -0.73
CHL1-212ENST00000471332 UHRF1BP1Q6BDS2 1440 aa10.46□□□□□ -0.74
CHL1-212ENST00000471332 RNF17Q9BXT8 1623 aaKnown RBP10.46□□□□□ -0.74
CHL1-212ENST00000471332 TET3O43151 1660 aa10.46□□□□□ -0.74
CHL1-212ENST00000471332 KIDINS220Q9ULH0 1771 aa10.44□□□□□ -0.74
CHL1-212ENST00000471332 CCDC144AA2RUR9 1427 aa10.44□□□□□ -0.74
CHL1-212ENST00000471332 KANK1Q14678 1352 aa10.44□□□□□ -0.74
CHL1-212ENST00000471332 L3MBTL2Q969R5 705 aa10.44□□□□□ -0.74
CHL1-212ENST00000471332 DIP2BQ9P265 1576 aa10.43□□□□□ -0.74
CHL1-212ENST00000471332 TRPM2O94759 1503 aa10.43□□□□□ -0.74
CHL1-212ENST00000471332 RALGAPBQ86X10 1494 aa10.43□□□□□ -0.74
CHL1-212ENST00000471332 DHX29Q7Z478 1369 aaKnown RBP10.43□□□□□ -0.74
CHL1-212ENST00000471332 NEURL4Q96JN8 1562 aa10.43□□□□□ -0.74
CHL1-212ENST00000471332 LMTK2Q8IWU2 1503 aa10.43□□□□□ -0.74
CHL1-212ENST00000471332 MROH1Q8NDA8 1641 aa10.42□□□□□ -0.74
CHL1-212ENST00000471332 A2MP01023 1474 aa10.42□□□□□ -0.74
CHL1-212ENST00000471332 AFAP1Q8N556 730 aa10.41□□□□□ -0.74
CHL1-212ENST00000471332 EFCAB6Q5THR3 1501 aa10.4□□□□□ -0.74
CHL1-212ENST00000471332 ZMYM4Q5VZL5 1548 aa10.4□□□□□ -0.74
CHL1-212ENST00000471332 EIF4G2P78344 907 aaKnown RBP eCLIP10.4□□□□□ -0.74
CHL1-212ENST00000471332 POLR1AO95602 1720 aaPredicted RBP10.4□□□□□ -0.74
CHL1-212ENST00000471332 SPHKAPQ2M3C7 1700 aa10.4□□□□□ -0.74
CHL1-212ENST00000471332 RICTORQ6R327 1708 aa10.4□□□□□ -0.74
CHL1-212ENST00000471332 E9PCH4 1651 aa10.4□□□□□ -0.74
CHL1-212ENST00000471332 PLA2R1Q13018 1463 aa10.39□□□□□ -0.75
CHL1-212ENST00000471332 LAMC1P11047 1609 aa10.39□□□□□ -0.75
CHL1-212ENST00000471332 ABCA6Q8N139 1617 aa10.39□□□□□ -0.75
CHL1-212ENST00000471332 PTPRTO14522 1441 aa10.39□□□□□ -0.75
CHL1-212ENST00000471332 FRMPD1Q5SYB0 1578 aa10.39□□□□□ -0.75
CHL1-212ENST00000471332 CNKSR2Q8WXI2 1034 aa10.38□□□□□ -0.75
CHL1-212ENST00000471332 CEP152O94986 1710 aa10.38□□□□□ -0.75
CHL1-212ENST00000471332 ZC3H13Q5T200 1668 aaKnown RBP10.38□□□□□ -0.75
CHL1-212ENST00000471332 CENPBP07199 599 aaPredicted RBP10.37□□□□□ -0.75
CHL1-212ENST00000471332 DIP2CQ9Y2E4 1556 aa10.37□□□□□ -0.75
CHL1-212ENST00000471332 SPATA31E1Q6ZUB1 1445 aa10.36□□□□□ -0.75
CHL1-212ENST00000471332 CYB5RLQ6IPT4 315 aa10.36□□□□□ -0.75
CHL1-212ENST00000471332 REREQ9P2R6 1566 aa10.35□□□□□ -0.75
CHL1-212ENST00000471332 MIER1Q8N108 512 aa10.35□□□□□ -0.75
CHL1-212ENST00000471332 STAC3Q96MF2 364 aa10.35□□□□□ -0.75
CHL1-212ENST00000471332 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.35□□□□□ -0.75
CHL1-212ENST00000471332 PPRC1Q5VV67 1664 aaKnown RBP10.34□□□□□ -0.75
CHL1-212ENST00000471332 PRAG1Q86YV5 1406 aa10.34□□□□□ -0.75
CHL1-212ENST00000471332 TRPM1Q7Z4N2 1603 aa10.34□□□□□ -0.75
CHL1-212ENST00000471332 HSPA5P11021 654 aaKnown RBP10.34□□□□□ -0.75
CHL1-212ENST00000471332 ARID4BQ4LE39 1312 aaPredicted RBP10.33□□□□□ -0.76
CHL1-212ENST00000471332 NBPF8Q3BBV2 869 aa10.33□□□□□ -0.76
CHL1-212ENST00000471332 MYT1LQ9UL68 1186 aa10.33□□□□□ -0.76
CHL1-212ENST00000471332 GPRASP1Q5JY77 1395 aa10.33□□□□□ -0.76
CHL1-212ENST00000471332 USP47Q96K76 1375 aa10.33□□□□□ -0.76
CHL1-212ENST00000471332 CLTCL1P53675 1640 aa10.33□□□□□ -0.76
CHL1-212ENST00000471332 KIF3BO15066 747 aa10.32□□□□□ -0.76
CHL1-212ENST00000471332 NCBP3Q53F19 620 aaKnown RBP10.32□□□□□ -0.76
CHL1-212ENST00000471332 ABCC3O15438 1527 aa10.32□□□□□ -0.76
CHL1-212ENST00000471332 CCDC7Q96M83 1385 aa10.31□□□□□ -0.76
CHL1-212ENST00000471332 CAMSAP1Q5T5Y3 1602 aa10.31□□□□□ -0.76
CHL1-212ENST00000471332 CNTLNQ9NXG0 1405 aa10.31□□□□□ -0.76
CHL1-212ENST00000471332 MYOM2P54296 1465 aa10.3□□□□□ -0.76
CHL1-212ENST00000471332 MADDQ8WXG6 1647 aa10.3□□□□□ -0.76
CHL1-212ENST00000471332 KIAA1210Q9ULL0 1709 aa10.3□□□□□ -0.76
CHL1-212ENST00000471332 ROCK2O75116 1388 aaKnown RBP10.29□□□□□ -0.76
CHL1-212ENST00000471332 AGLP35573 1532 aa10.29□□□□□ -0.76
CHL1-212ENST00000471332 ARHGAP31Q2M1Z3 1444 aa10.29□□□□□ -0.76
CHL1-212ENST00000471332 KIF13AQ9H1H9 1805 aa10.28□□□□□ -0.76
CHL1-212ENST00000471332 ADGRB3O60242 1522 aa10.28□□□□□ -0.76
CHL1-212ENST00000471332 ARHGEF40Q8TER5 1519 aa10.28□□□□□ -0.76
CHL1-212ENST00000471332 CCER2I3L3R5 266 aa10.28□□□□□ -0.76
CHL1-212ENST00000471332 FAM69CQ0P6D2 419 aa10.28□□□□□ -0.76
CHL1-212ENST00000471332 DDX10Q13206 875 aaKnown RBP10.28□□□□□ -0.76
CHL1-212ENST00000471332 DCAF11Q8TEB1 546 aa10.28□□□□□ -0.76
CHL1-212ENST00000471332 WASHC2AQ641Q2 1341 aa10.28□□□□□ -0.76
CHL1-212ENST00000471332 KIF1BO60333 1816 aa10.28□□□□□ -0.76
CHL1-212ENST00000471332 ANP32CO43423 234 aa10.27□□□□□ -0.77
CHL1-212ENST00000471332 IFT172Q9UG01 1749 aa10.27□□□□□ -0.77
CHL1-212ENST00000471332 NPATQ14207 1427 aa10.26□□□□□ -0.77
CHL1-212ENST00000471332 ZNF326Q5BKZ1 582 aaKnown RBP10.26□□□□□ -0.77
CHL1-212ENST00000471332 CARD11Q9BXL7 1154 aa10.26□□□□□ -0.77
CHL1-212ENST00000471332 PIK3C2BO00750 1634 aa10.25□□□□□ -0.77
CHL1-212ENST00000471332 RAPGEF3O95398 923 aa10.25□□□□□ -0.77
CHL1-212ENST00000471332 IQGAP1P46940 1657 aa10.25□□□□□ -0.77
CHL1-212ENST00000471332 NOS1P29475 1434 aa10.24□□□□□ -0.77
CHL1-212ENST00000471332 YEATS2Q9ULM3 1422 aa10.24□□□□□ -0.77
CHL1-212ENST00000471332 HIRIP3Q9BW71 556 aaPredicted RBP10.24□□□□□ -0.77
CHL1-212ENST00000471332 NRXN1Q9ULB1 1477 aa10.23□□□□□ -0.77
CHL1-212ENST00000471332 TSPOAP1O95153 1857 aa10.23□□□□□ -0.77
CHL1-212ENST00000471332 KIF7Q2M1P5 1343 aa10.23□□□□□ -0.77
CHL1-212ENST00000471332 MROH2AA6NES4 1674 aa10.22□□□□□ -0.77
CHL1-212ENST00000471332 HOXD11P31277 338 aaPredicted RBP10.22□□□□□ -0.77
CHL1-212ENST00000471332 RNF216Q9NWF9 866 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms