RNA–Protein interactions for RNA: ENST00000471296.5

GTF2B-204, Transcript of general transcription factor IIB, humanhuman

TSL 3

Gene GTF2B, Length 593 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-204ENST00000471296 SPDYE16A6NNV3 312 aaPredicted RBP12.9□□□□□ -0.34
GTF2B-204ENST00000471296 EPAS1Q99814 870 aa12.9□□□□□ -0.34
GTF2B-204ENST00000471296 ARIH1Q9Y4X5 557 aaPredicted RBP12.9□□□□□ -0.34
GTF2B-204ENST00000471296 PLCB2Q00722 1185 aa12.89□□□□□ -0.35
GTF2B-204ENST00000471296 NBR1Q14596 966 aa12.88□□□□□ -0.35
GTF2B-204ENST00000471296 SLC4A5Q9BY07 1137 aa12.88□□□□□ -0.35
GTF2B-204ENST00000471296 PPP1R3GB7ZBB8 358 aa12.87□□□□□ -0.35
GTF2B-204ENST00000471296 STAC3Q96MF2 364 aa12.87□□□□□ -0.35
GTF2B-204ENST00000471296 PROX2Q3B8N5 592 aa12.86□□□□□ -0.35
GTF2B-204ENST00000471296 C6orf132Q5T0Z8 1188 aa12.86□□□□□ -0.35
GTF2B-204ENST00000471296 GRXCR2A6NFK2 248 aa12.84□□□□□ -0.35
GTF2B-204ENST00000471296 BHMG1C9JSJ3 638 aaPredicted RBP12.84□□□□□ -0.35
GTF2B-204ENST00000471296 PRIM1P49642 420 aaKnown RBP12.84□□□□□ -0.35
GTF2B-204ENST00000471296 KCNV2Q8TDN2 545 aa12.83□□□□□ -0.36
GTF2B-204ENST00000471296 KCTD12Q96CX2 325 aaKnown RBP12.83□□□□□ -0.36
GTF2B-204ENST00000471296 TSR1Q2NL82 804 aaKnown RBP12.82□□□□□ -0.36
GTF2B-204ENST00000471296 EN1Q05925 392 aaPredicted RBP12.81□□□□□ -0.36
GTF2B-204ENST00000471296 MAP3K7O43318 606 aa12.8□□□□□ -0.36
GTF2B-204ENST00000471296 MRPL50Q8N5N7 158 aaKnown RBP12.77□□□□□ -0.37
GTF2B-204ENST00000471296 CCDC180Q9P1Z9 1646 aa12.77□□□□□ -0.37
GTF2B-204ENST00000471296 ARHGEF1Q92888 912 aaKnown RBP12.76□□□□□ -0.37
GTF2B-204ENST00000471296 OSBPP22059 807 aa12.75□□□□□ -0.37
GTF2B-204ENST00000471296 HAP1P54257 671 aaPredicted RBP12.75□□□□□ -0.37
GTF2B-204ENST00000471296 KIAA1468Q9P260 1216 aa12.75□□□□□ -0.37
GTF2B-204ENST00000471296 HCSTQ9UBK5 93 aa12.75□□□□□ -0.37
GTF2B-204ENST00000471296 RABGEF1Q9UJ41 708 aa12.75□□□□□ -0.37
GTF2B-204ENST00000471296 NBPF3Q9H094 633 aa12.74□□□□□ -0.37
GTF2B-204ENST00000471296 GOLGA8CPA6NN73 597 aa12.73□□□□□ -0.37
GTF2B-204ENST00000471296 MLLT3P42568 568 aaPredicted RBP12.72□□□□□ -0.37
GTF2B-204ENST00000471296 CDHR5Q9HBB8 845 aa12.72□□□□□ -0.37
GTF2B-204ENST00000471296 TRIM6-TRIM34B2RNG4 842 aa12.71□□□□□ -0.37
GTF2B-204ENST00000471296 PTPN5P54829 565 aa12.71□□□□□ -0.37
GTF2B-204ENST00000471296 WNT2BQ93097 391 aa12.71□□□□□ -0.37
GTF2B-204ENST00000471296 SEPT9Q9UHD8 586 aaPredicted RBP12.7□□□□□ -0.38
GTF2B-204ENST00000471296 TSKSQ9UJT2 592 aa12.69□□□□□ -0.38
GTF2B-204ENST00000471296 THSD4Q6ZMP0 1018 aa12.68□□□□□ -0.38
GTF2B-204ENST00000471296 ONECUT3O60422 494 aaPredicted RBP12.66□□□□□ -0.38
GTF2B-204ENST00000471296 P3H3Q8IVL6 736 aa12.65□□□□□ -0.38
GTF2B-204ENST00000471296 CDCA7LQ96GN5 454 aa12.65□□□□□ -0.38
GTF2B-204ENST00000471296 FAM198AQ9UFP1 575 aa12.65□□□□□ -0.38
GTF2B-204ENST00000471296 PRSS12P56730 875 aa12.63□□□□□ -0.39
GTF2B-204ENST00000471296 KDM2AQ9Y2K7 1162 aa12.63□□□□□ -0.39
GTF2B-204ENST00000471296 C3orf80F5H4A9 247 aa12.62□□□□□ -0.39
GTF2B-204ENST00000471296 BCAMP50895 628 aa12.62□□□□□ -0.39
GTF2B-204ENST00000471296 LAPTM4BQ86VI4 370 aa12.62□□□□□ -0.39
GTF2B-204ENST00000471296 ZFRQ96KR1 1074 aaKnown RBP12.62□□□□□ -0.39
GTF2B-204ENST00000471296 SEMA3EO15041 775 aa12.61□□□□□ -0.39
GTF2B-204ENST00000471296 PACS2Q86VP3 889 aa12.61□□□□□ -0.39
GTF2B-204ENST00000471296 ANKK1Q8NFD2 765 aa12.61□□□□□ -0.39
GTF2B-204ENST00000471296 PLA2G2EQ9NZK7 142 aa12.61□□□□□ -0.39
GTF2B-204ENST00000471296 SMAPO00193 183 aa12.6□□□□□ -0.39
GTF2B-204ENST00000471296 NPDC1Q9NQX5 325 aaPredicted RBP12.6□□□□□ -0.39
GTF2B-204ENST00000471296 CERKQ8TCT0 537 aa12.59□□□□□ -0.39
GTF2B-204ENST00000471296 FAM98CQ17RN3 349 aaKnown RBP12.58□□□□□ -0.4
GTF2B-204ENST00000471296 SOWAHBA6NEL2 793 aa12.55□□□□□ -0.4
GTF2B-204ENST00000471296 PADI6Q6TGC4 694 aa12.54□□□□□ -0.4
GTF2B-204ENST00000471296 PNMA3Q9UL41 463 aa12.54□□□□□ -0.4
GTF2B-204ENST00000471296 TATDN2Q93075 761 aa12.53□□□□□ -0.4
GTF2B-204ENST00000471296 NUDT18Q6ZVK8 323 aa12.51□□□□□ -0.41
GTF2B-204ENST00000471296 NUTM2FA1L443 756 aa12.5□□□□□ -0.41
GTF2B-204ENST00000471296 NBPF26B4DH59 902 aa12.5□□□□□ -0.41
GTF2B-204ENST00000471296 TTC13Q8NBP0 860 aa12.5□□□□□ -0.41
GTF2B-204ENST00000471296 LRCH3Q96II8 777 aa12.5□□□□□ -0.41
GTF2B-204ENST00000471296 WBP1LQ9NX94 342 aa12.5□□□□□ -0.41
GTF2B-204ENST00000471296 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.5□□□□□ -0.41
GTF2B-204ENST00000471296 RBM27Q9P2N5 1060 aaKnown RBP12.5□□□□□ -0.41
GTF2B-204ENST00000471296 PTGDRQ13258 359 aa12.48□□□□□ -0.41
GTF2B-204ENST00000471296 SAMD7Q7Z3H4 446 aa12.48□□□□□ -0.41
GTF2B-204ENST00000471296 HPS5Q9UPZ3 1129 aa12.48□□□□□ -0.41
GTF2B-204ENST00000471296 TESPA1A2RU30 521 aaPredicted RBP12.47□□□□□ -0.41
GTF2B-204ENST00000471296 RBM26Q5T8P6 1007 aaKnown RBP12.45□□□□□ -0.42
GTF2B-204ENST00000471296 VSIG10Q8N0Z9 540 aa12.44□□□□□ -0.42
GTF2B-204ENST00000471296 TSR3Q9UJK0 312 aaKnown RBP12.44□□□□□ -0.42
GTF2B-204ENST00000471296 ABCC9O60706 1549 aa12.42□□□□□ -0.42
GTF2B-204ENST00000471296 FAM161AQ3B820 660 aa12.41□□□□□ -0.42
GTF2B-204ENST00000471296 RNF40O75150 1001 aa12.39□□□□□ -0.43
GTF2B-204ENST00000471296 PPP4CP60510 307 aa12.39□□□□□ -0.43
GTF2B-204ENST00000471296 EYA1Q99502 592 aa12.39□□□□□ -0.43
GTF2B-204ENST00000471296 FCHSD2O94868 740 aa12.38□□□□□ -0.43
GTF2B-204ENST00000471296 SWT1Q5T5J6 900 aaKnown RBP12.37□□□□□ -0.43
GTF2B-204ENST00000471296 SMYD5Q6GMV2 418 aa12.36□□□□□ -0.43
GTF2B-204ENST00000471296 NYAP1Q6ZVC0 841 aa12.36□□□□□ -0.43
GTF2B-204ENST00000471296 ADGRG1Q9Y653 693 aa12.36□□□□□ -0.43
GTF2B-204ENST00000471296 HDGFP51858 240 aaKnown RBP12.35□□□□□ -0.43
GTF2B-204ENST00000471296 ITGBL1O95965 494 aaPredicted RBP12.33□□□□□ -0.44
GTF2B-204ENST00000471296 IFFO2Q5TF58 517 aa12.33□□□□□ -0.44
GTF2B-204ENST00000471296 FECHP22830 423 aa12.32□□□□□ -0.44
GTF2B-204ENST00000471296 GPR37O15354 613 aa12.31□□□□□ -0.44
GTF2B-204ENST00000471296 RBM46Q8TBY0 533 aaKnown RBP12.3□□□□□ -0.44
GTF2B-204ENST00000471296 APLP1P51693 650 aa12.29□□□□□ -0.44
GTF2B-204ENST00000471296 HIC1Q14526 733 aa12.29□□□□□ -0.44
GTF2B-204ENST00000471296 A0A0G2JS52 829 aa12.28□□□□□ -0.44
GTF2B-204ENST00000471296 RCCD1A6NED2 376 aa12.27□□□□□ -0.45
GTF2B-204ENST00000471296 DNAJB2P25686 324 aa12.27□□□□□ -0.45
GTF2B-204ENST00000471296 KCNC4Q03721 635 aa12.27□□□□□ -0.45
GTF2B-204ENST00000471296 SLF2Q8IX21 1173 aa12.27□□□□□ -0.45
GTF2B-204ENST00000471296 TMEM134Q9H6X4 195 aa12.25□□□□□ -0.45
GTF2B-204ENST00000471296 GNPATO15228 680 aa12.24□□□□□ -0.45
GTF2B-204ENST00000471296 TJAP1Q5JTD0 557 aa12.24□□□□□ -0.45
GTF2B-204ENST00000471296 GPIHBP1Q8IV16 184 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms