RNA–Protein interactions for RNA: ENST00000471212.5

TPM2-205, Transcript of tropomyosin 2, humanhuman

TSL 2

Gene TPM2, Length 1,363 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-205ENST00000471212 SHANK2Q9UPX8 1470 aa26.56■■□□□ 1.84
TPM2-205ENST00000471212 DUOX2Q9NRD8 1548 aa26.56■■□□□ 1.84
TPM2-205ENST00000471212 DAPK1P53355 1430 aa26.56■■□□□ 1.84
TPM2-205ENST00000471212 KIF15Q9NS87 1388 aa26.55■■□□□ 1.84
TPM2-205ENST00000471212 PTPRKQ15262 1439 aa26.55■■□□□ 1.84
TPM2-205ENST00000471212 EIF2AK4Q9P2K8 1649 aaKnown RBP26.55■■□□□ 1.84
TPM2-205ENST00000471212 CHIC2Q9UKJ5 165 aa26.55■■□□□ 1.84
TPM2-205ENST00000471212 DNMT1P26358 1616 aaKnown RBP26.54■■□□□ 1.84
TPM2-205ENST00000471212 MYO3AQ8NEV4 1616 aa26.53■■□□□ 1.84
TPM2-205ENST00000471212 ABCC5O15440 1437 aa26.53■■□□□ 1.84
TPM2-205ENST00000471212 TCOF1Q13428 1488 aaKnown RBP26.53■■□□□ 1.84
TPM2-205ENST00000471212 ANKRD30AQ9BXX3 1397 aa26.52■■□□□ 1.84
TPM2-205ENST00000471212 CAMSAP1Q5T5Y3 1602 aa26.5■■□□□ 1.83
TPM2-205ENST00000471212 TNRQ92752 1358 aa26.49■■□□□ 1.83
TPM2-205ENST00000471212 CEP170BQ9Y4F5 1589 aaPredicted RBP26.49■■□□□ 1.83
TPM2-205ENST00000471212 RNF17Q9BXT8 1623 aaKnown RBP26.49■■□□□ 1.83
TPM2-205ENST00000471212 STRCQ7RTU9 1775 aa26.49■■□□□ 1.83
TPM2-205ENST00000471212 PZPP20742 1482 aa26.48■■□□□ 1.83
TPM2-205ENST00000471212 ZC3H13Q5T200 1668 aaKnown RBP26.48■■□□□ 1.83
TPM2-205ENST00000471212 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.48■■□□□ 1.838e-7■■■■□ 23.1
TPM2-205ENST00000471212 ZNF142P52746 1687 aaPredicted RBP26.47■■□□□ 1.83
TPM2-205ENST00000471212 ERBINQ96RT1 1412 aa26.47■■□□□ 1.83
TPM2-205ENST00000471212 KANK1Q14678 1352 aa26.47■■□□□ 1.83
TPM2-205ENST00000471212 FBXO41Q8TF61 875 aa26.46■■□□□ 1.83
TPM2-205ENST00000471212 FBXO31Q5XUX0 539 aaPredicted RBP26.46■■□□□ 1.83
TPM2-205ENST00000471212 NCOA1Q15788 1441 aa26.45■■□□□ 1.82
TPM2-205ENST00000471212 PPARGC1BQ86YN6 1023 aaKnown RBP26.43■■□□□ 1.82
TPM2-205ENST00000471212 PTPRTO14522 1441 aa26.42■■□□□ 1.82
TPM2-205ENST00000471212 ABCC3O15438 1527 aa26.42■■□□□ 1.82
TPM2-205ENST00000471212 A2ML1A8K2U0 1454 aa26.42■■□□□ 1.82
TPM2-205ENST00000471212 PKD2Q13563 968 aa26.41■■□□□ 1.82
TPM2-205ENST00000471212 CERKQ8TCT0 537 aa26.41■■□□□ 1.82
TPM2-205ENST00000471212 CEP152O94986 1710 aa26.41■■□□□ 1.82
TPM2-205ENST00000471212 NCKAP5LQ9HCH0 1330 aa26.4■■□□□ 1.82
TPM2-205ENST00000471212 CFAP65Q6ZU64 1925 aaKnown RBP26.38■■□□□ 1.81
TPM2-205ENST00000471212 PLA2R1Q13018 1463 aa26.36■■□□□ 1.81
TPM2-205ENST00000471212 NLRP1Q9C000 1473 aa26.35■■□□□ 1.81
TPM2-205ENST00000471212 THEMISQ8N1K5 641 aaPredicted RBP26.35■■□□□ 1.81
TPM2-205ENST00000471212 ITGAEP38570 1179 aa26.34■■□□□ 1.81
TPM2-205ENST00000471212 PRDM15P57071 1507 aaPredicted RBP26.33■■□□□ 1.81
TPM2-205ENST00000471212 MROH1Q8NDA8 1641 aa26.32■■□□□ 1.8
TPM2-205ENST00000471212 UGGT1Q9NYU2 1555 aa26.31■■□□□ 1.8
TPM2-205ENST00000471212 ADGRL2O95490 1459 aa26.31■■□□□ 1.8
TPM2-205ENST00000471212 ANKLE2Q86XL3 938 aa26.3■■□□□ 1.8
TPM2-205ENST00000471212 ERVK-7P63135 1459 aa26.29■■□□□ 1.8
TPM2-205ENST00000471212 STAG3Q9UJ98 1225 aa26.29■■□□□ 1.8
TPM2-205ENST00000471212 DEPDC5O75140 1603 aa26.27■■□□□ 1.8
TPM2-205ENST00000471212 ANKRD50Q9ULJ7 1429 aa26.27■■□□□ 1.8
TPM2-205ENST00000471212 SPATA31D1Q6ZQQ2 1576 aa26.27■■□□□ 1.8
TPM2-205ENST00000471212 POLR1AO95602 1720 aaPredicted RBP26.26■■□□□ 1.79
TPM2-205ENST00000471212 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.26■■□□□ 1.79
TPM2-205ENST00000471212 ARHGAP31Q2M1Z3 1444 aa26.22■■□□□ 1.79
TPM2-205ENST00000471212 ZNF335Q9H4Z2 1342 aaPredicted RBP26.18■■□□□ 1.78
TPM2-205ENST00000471212 ROCK1Q13464 1354 aa26.17■■□□□ 1.78
TPM2-205ENST00000471212 LMTK2Q8IWU2 1503 aa26.15■■□□□ 1.78
TPM2-205ENST00000471212 EID1Q9Y6B2 187 aa26.15■■□□□ 1.78
TPM2-205ENST00000471212 NPHP4O75161 1426 aaPredicted RBP26.13■■□□□ 1.77
TPM2-205ENST00000471212 LTBP4Q8N2S1 1624 aa26.12■■□□□ 1.77
TPM2-205ENST00000471212 EFCAB6Q5THR3 1501 aa26.12■■□□□ 1.77
TPM2-205ENST00000471212 UBR1Q8IWV7 1749 aa26.11■■□□□ 1.77
TPM2-205ENST00000471212 VWDEQ8N2E2 1590 aa26.11■■□□□ 1.77
TPM2-205ENST00000471212 NEURL4Q96JN8 1562 aa26.09■■□□□ 1.77
TPM2-205ENST00000471212 IQSEC2Q5JU85 1478 aa26.09■■□□□ 1.77
TPM2-205ENST00000471212 TXNDC2Q86VQ3 553 aa26.08■■□□□ 1.77
TPM2-205ENST00000471212 IQGAP1P46940 1657 aa26.08■■□□□ 1.77
TPM2-205ENST00000471212 PIK3C2BO00750 1634 aa26.07■■□□□ 1.76
TPM2-205ENST00000471212 TET3O43151 1660 aa26.07■■□□□ 1.76
TPM2-205ENST00000471212 RPRD2Q5VT52 1461 aaKnown RBP26.06■■□□□ 1.76
TPM2-205ENST00000471212 SLC52A1Q9NWF4 448 aa26.06■■□□□ 1.76
TPM2-205ENST00000471212 UNC13BO14795 1591 aa26.06■■□□□ 1.76
TPM2-205ENST00000471212 SCAF11Q99590 1463 aaKnown RBP26.05■■□□□ 1.76
TPM2-205ENST00000471212 GCC2Q8IWJ2 1684 aa26.05■■□□□ 1.76
TPM2-205ENST00000471212 NUP155O75694 1391 aa26.04■■□□□ 1.76
TPM2-205ENST00000471212 UBAP1LF5GYI3 381 aa26.04■■□□□ 1.76
TPM2-205ENST00000471212 IDI1Q13907 227 aa26.04■■□□□ 1.76
TPM2-205ENST00000471212 BCANQ96GW7 911 aa26.04■■□□□ 1.76
TPM2-205ENST00000471212 MED14O60244 1454 aa26.03■■□□□ 1.76
TPM2-205ENST00000471212 RRBP1Q9P2E9 1410 aaKnown RBP26.03■■□□□ 1.76
TPM2-205ENST00000471212 CHGAP10645 457 aaKnown RBP26.02■■□□□ 1.76
TPM2-205ENST00000471212 CPS1P31327 1500 aa26.02■■□□□ 1.76
TPM2-205ENST00000471212 SYNMO15061 1565 aa26■■□□□ 1.75
TPM2-205ENST00000471212 SCAF1Q9H7N4 1312 aaKnown RBP25.99■■□□□ 1.75
TPM2-205ENST00000471212 NOS1P29475 1434 aa25.99■■□□□ 1.75
TPM2-205ENST00000471212 TMEM2Q9UHN6 1383 aa25.98■■□□□ 1.75
TPM2-205ENST00000471212 HDGFP51858 240 aaKnown RBP25.98■■□□□ 1.75
TPM2-205ENST00000471212 SLIT1O75093 1534 aa25.98■■□□□ 1.75
TPM2-205ENST00000471212 KDM5AP29375 1690 aaKnown RBP25.97■■□□□ 1.75
TPM2-205ENST00000471212 PPP1R15AO75807 674 aaPredicted RBP25.97■■□□□ 1.75
TPM2-205ENST00000471212 IQGAP3Q86VI3 1631 aa25.97■■□□□ 1.75
TPM2-205ENST00000471212 ADGRB3O60242 1522 aa25.96■■□□□ 1.75
TPM2-205ENST00000471212 ARHGAP23Q9P227 1491 aa25.95■■□□□ 1.74
TPM2-205ENST00000471212 LTKP29376 864 aa25.95■■□□□ 1.74
TPM2-205ENST00000471212 TOM1O60784 492 aa25.93■■□□□ 1.74
TPM2-205ENST00000471212 E9PCH4 1651 aa25.92■■□□□ 1.74
TPM2-205ENST00000471212 TRIM52Q96A61 297 aa25.92■■□□□ 1.74
TPM2-205ENST00000471212 PIP4K2BP78356 416 aa25.88■■□□□ 1.73
TPM2-205ENST00000471212 SENP3Q9H4L4 574 aaPredicted RBP25.86■■□□□ 1.73
TPM2-205ENST00000471212 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.85■■□□□ 1.73
TPM2-205ENST00000471212 MYO5BQ9ULV0 1848 aa25.85■■□□□ 1.73
TPM2-205ENST00000471212 NAIPQ13075 1403 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms