RNA–Protein interactions for RNA: ENST00000471134.1

TRA2B-210, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-210ENST00000471134 DDX12PQ92771 950 aa14.32□□□□□ -0.12
TRA2B-210ENST00000471134 PDIA6Q15084 440 aa14.31□□□□□ -0.12
TRA2B-210ENST00000471134 EPAS1Q99814 870 aa14.3□□□□□ -0.12
TRA2B-210ENST00000471134 PLA2G2EQ9NZK7 142 aa14.3□□□□□ -0.12
TRA2B-210ENST00000471134 MRPL50Q8N5N7 158 aaKnown RBP14.29□□□□□ -0.12
TRA2B-210ENST00000471134 C6orf132Q5T0Z8 1188 aa14.28□□□□□ -0.12
TRA2B-210ENST00000471134 E2F4Q16254 413 aa14.27□□□□□ -0.13
TRA2B-210ENST00000471134 RBM33Q96EV2 1170 aaKnown RBP14.27□□□□□ -0.13
TRA2B-210ENST00000471134 PTPN5P54829 565 aa14.26□□□□□ -0.13
TRA2B-210ENST00000471134 THSD4Q6ZMP0 1018 aa14.26□□□□□ -0.13
TRA2B-210ENST00000471134 NBPF3Q9H094 633 aa14.26□□□□□ -0.13
TRA2B-210ENST00000471134 RABGEF1Q9UJ41 708 aa14.25□□□□□ -0.13
TRA2B-210ENST00000471134 WNT2BQ93097 391 aa14.24□□□□□ -0.13
TRA2B-210ENST00000471134 NBR1Q14596 966 aa14.23□□□□□ -0.13
TRA2B-210ENST00000471134 GOLGA8CPA6NN73 597 aa14.21□□□□□ -0.13
TRA2B-210ENST00000471134 EN1Q05925 392 aaPredicted RBP14.21□□□□□ -0.13
TRA2B-210ENST00000471134 ARIH1Q9Y4X5 557 aaPredicted RBP14.21□□□□□ -0.13
TRA2B-210ENST00000471134 SPDYE16A6NNV3 312 aaPredicted RBP14.2□□□□□ -0.14
TRA2B-210ENST00000471134 PRIM1P49642 420 aaKnown RBP14.2□□□□□ -0.14
TRA2B-210ENST00000471134 TSR1Q2NL82 804 aaKnown RBP14.2□□□□□ -0.14
TRA2B-210ENST00000471134 WDR70Q9NW82 654 aa14.19□□□□□ -0.14
TRA2B-210ENST00000471134 KIAA1468Q9P260 1216 aa14.19□□□□□ -0.14
TRA2B-210ENST00000471134 TRIM6-TRIM34B2RNG4 842 aa14.16□□□□□ -0.14
TRA2B-210ENST00000471134 MAP3K7O43318 606 aa14.15□□□□□ -0.14
TRA2B-210ENST00000471134 ONECUT3O60422 494 aaPredicted RBP14.14□□□□□ -0.15
TRA2B-210ENST00000471134 TSHZ2Q9NRE2 1034 aa14.14□□□□□ -0.15
TRA2B-210ENST00000471134 SEPT9Q9UHD8 586 aaPredicted RBP14.14□□□□□ -0.15
TRA2B-210ENST00000471134 GRXCR2A6NFK2 248 aa14.12□□□□□ -0.15
TRA2B-210ENST00000471134 BCAMP50895 628 aa14.11□□□□□ -0.15
TRA2B-210ENST00000471134 LAPTM4BQ86VI4 370 aa14.11□□□□□ -0.15
TRA2B-210ENST00000471134 ANKK1Q8NFD2 765 aa14.1□□□□□ -0.15
TRA2B-210ENST00000471134 TSKSQ9UJT2 592 aa14.1□□□□□ -0.15
TRA2B-210ENST00000471134 ZFRQ96KR1 1074 aaKnown RBP14.09□□□□□ -0.15
TRA2B-210ENST00000471134 OSBPP22059 807 aa14.07□□□□□ -0.16
TRA2B-210ENST00000471134 SOWAHBA6NEL2 793 aa14.06□□□□□ -0.16
TRA2B-210ENST00000471134 FAM198AQ9UFP1 575 aa14.06□□□□□ -0.16
TRA2B-210ENST00000471134 CDHR5Q9HBB8 845 aa14.05□□□□□ -0.16
TRA2B-210ENST00000471134 FAM98CQ17RN3 349 aaKnown RBP14.04□□□□□ -0.16
TRA2B-210ENST00000471134 C3orf80F5H4A9 247 aa14.02□□□□□ -0.17
TRA2B-210ENST00000471134 CDCA7LQ96GN5 454 aa14.02□□□□□ -0.17
TRA2B-210ENST00000471134 KCNV2Q8TDN2 545 aa14.01□□□□□ -0.17
TRA2B-210ENST00000471134 PRSS12P56730 875 aa14□□□□□ -0.17
TRA2B-210ENST00000471134 IFFO2Q5TF58 517 aa14□□□□□ -0.17
TRA2B-210ENST00000471134 SMAPO00193 183 aa13.99□□□□□ -0.17
TRA2B-210ENST00000471134 WBP1LQ9NX94 342 aa13.99□□□□□ -0.17
TRA2B-210ENST00000471134 PACS2Q86VP3 889 aa13.98□□□□□ -0.17
TRA2B-210ENST00000471134 CERKQ8TCT0 537 aa13.95□□□□□ -0.18
TRA2B-210ENST00000471134 MLLT3P42568 568 aaPredicted RBP13.94□□□□□ -0.18
TRA2B-210ENST00000471134 LRCH3Q96II8 777 aa13.94□□□□□ -0.18
TRA2B-210ENST00000471134 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.94□□□□□ -0.18
TRA2B-210ENST00000471134 ARHGEF1Q92888 912 aaKnown RBP13.93□□□□□ -0.18
TRA2B-210ENST00000471134 NPDC1Q9NQX5 325 aaPredicted RBP13.93□□□□□ -0.18
TRA2B-210ENST00000471134 HPS5Q9UPZ3 1129 aa13.93□□□□□ -0.18
TRA2B-210ENST00000471134 A0A0G2JS52 829 aa13.92□□□□□ -0.18
TRA2B-210ENST00000471134 ITGBL1O95965 494 aaPredicted RBP13.92□□□□□ -0.18
TRA2B-210ENST00000471134 TSR3Q9UJK0 312 aaKnown RBP13.91□□□□□ -0.18
TRA2B-210ENST00000471134 TATDN2Q93075 761 aa13.9□□□□□ -0.18
TRA2B-210ENST00000471134 NYAP1Q6ZVC0 841 aa13.89□□□□□ -0.19
TRA2B-210ENST00000471134 TTC13Q8NBP0 860 aa13.89□□□□□ -0.19
TRA2B-210ENST00000471134 PNMA3Q9UL41 463 aa13.89□□□□□ -0.19
TRA2B-210ENST00000471134 NBPF26B4DH59 902 aa13.88□□□□□ -0.19
TRA2B-210ENST00000471134 SAMD7Q7Z3H4 446 aa13.88□□□□□ -0.19
TRA2B-210ENST00000471134 RBM27Q9P2N5 1060 aaKnown RBP13.88□□□□□ -0.19
TRA2B-210ENST00000471134 PADI6Q6TGC4 694 aa13.87□□□□□ -0.19
TRA2B-210ENST00000471134 NUDT18Q6ZVK8 323 aa13.86□□□□□ -0.19
TRA2B-210ENST00000471134 PPP4CP60510 307 aa13.8□□□□□ -0.2
TRA2B-210ENST00000471134 PLCB2Q00722 1185 aa13.79□□□□□ -0.2
TRA2B-210ENST00000471134 KCNC4Q03721 635 aa13.78□□□□□ -0.2
TRA2B-210ENST00000471134 RGS20O76081 388 aa13.77□□□□□ -0.21
TRA2B-210ENST00000471134 SEMA3EO15041 775 aa13.75□□□□□ -0.21
TRA2B-210ENST00000471134 PTGDRQ13258 359 aa13.75□□□□□ -0.21
TRA2B-210ENST00000471134 P3H3Q8IVL6 736 aa13.75□□□□□ -0.21
TRA2B-210ENST00000471134 EYA1Q99502 592 aa13.74□□□□□ -0.21
TRA2B-210ENST00000471134 RNF40O75150 1001 aa13.73□□□□□ -0.21
TRA2B-210ENST00000471134 TJAP1Q5JTD0 557 aa13.73□□□□□ -0.21
TRA2B-210ENST00000471134 SWT1Q5T5J6 900 aaKnown RBP13.73□□□□□ -0.21
TRA2B-210ENST00000471134 APLP1P51693 650 aa13.7□□□□□ -0.22
TRA2B-210ENST00000471134 MTRQ99707 1265 aa13.69□□□□□ -0.22
TRA2B-210ENST00000471134 NUTM2FA1L443 756 aa13.66□□□□□ -0.22
TRA2B-210ENST00000471134 HDGFP51858 240 aaKnown RBP13.65□□□□□ -0.22
TRA2B-210ENST00000471134 FAM161AQ3B820 660 aa13.65□□□□□ -0.22
TRA2B-210ENST00000471134 ADGRG1Q9Y653 693 aa13.65□□□□□ -0.22
TRA2B-210ENST00000471134 SLF2Q8IX21 1173 aa13.63□□□□□ -0.23
TRA2B-210ENST00000471134 ZNF516Q92618 1163 aa13.63□□□□□ -0.23
TRA2B-210ENST00000471134 IRX2Q9BZI1 471 aaPredicted RBP13.62□□□□□ -0.23
TRA2B-210ENST00000471134 IL21Q9HBE4 155 aa13.62□□□□□ -0.23
TRA2B-210ENST00000471134 TESPA1A2RU30 521 aaPredicted RBP13.6□□□□□ -0.23
TRA2B-210ENST00000471134 FCHSD2O94868 740 aa13.59□□□□□ -0.23
TRA2B-210ENST00000471134 DNAJB2P25686 324 aa13.58□□□□□ -0.24
TRA2B-210ENST00000471134 RBM26Q5T8P6 1007 aaKnown RBP13.58□□□□□ -0.24
TRA2B-210ENST00000471134 RBM46Q8TBY0 533 aaKnown RBP13.57□□□□□ -0.24
TRA2B-210ENST00000471134 TMEM134Q9H6X4 195 aa13.57□□□□□ -0.24
TRA2B-210ENST00000471134 HAP1P54257 671 aaPredicted RBP13.56□□□□□ -0.24
TRA2B-210ENST00000471134 RCCD1A6NED2 376 aa13.55□□□□□ -0.24
TRA2B-210ENST00000471134 COPS2P61201 443 aa13.55□□□□□ -0.24
TRA2B-210ENST00000471134 NKX2-3Q8TAU0 364 aa13.55□□□□□ -0.24
TRA2B-210ENST00000471134 KDM2AQ9Y2K7 1162 aa13.55□□□□□ -0.24
TRA2B-210ENST00000471134 NECTIN2Q92692 538 aa13.54□□□□□ -0.24
TRA2B-210ENST00000471134 PPP1R18Q6NYC8 613 aa13.53□□□□□ -0.24
TRA2B-210ENST00000471134 GPR37O15354 613 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms