RNA–Protein interactions for RNA: ENST00000470788.1

CNIH3-203, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

TSL 3

Gene CNIH3, Length 846 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-203ENST00000470788 PPP1R3GB7ZBB8 358 aa14.21□□□□□ -0.13
CNIH3-203ENST00000470788 CFAP44Q96MT7 982 aa14.19□□□□□ -0.14
CNIH3-203ENST00000470788 PAXIP1Q6ZW49 1069 aaPredicted RBP14.18□□□□□ -0.14
CNIH3-203ENST00000470788 WDR70Q9NW82 654 aa14.17□□□□□ -0.14
CNIH3-203ENST00000470788 PTPN5P54829 565 aa14.15□□□□□ -0.14
CNIH3-203ENST00000470788 RABGEF1Q9UJ41 708 aa14.15□□□□□ -0.14
CNIH3-203ENST00000470788 WNT2BQ93097 391 aa14.14□□□□□ -0.15
CNIH3-203ENST00000470788 SPDYE16A6NNV3 312 aaPredicted RBP14.12□□□□□ -0.15
CNIH3-203ENST00000470788 E2F4Q16254 413 aa14.11□□□□□ -0.15
CNIH3-203ENST00000470788 C6orf132Q5T0Z8 1188 aa14.11□□□□□ -0.15
CNIH3-203ENST00000470788 THSD4Q6ZMP0 1018 aa14.11□□□□□ -0.15
CNIH3-203ENST00000470788 ONECUT3O60422 494 aaPredicted RBP14.1□□□□□ -0.15
CNIH3-203ENST00000470788 COL9A1P20849 921 aa14.09□□□□□ -0.15
CNIH3-203ENST00000470788 PDIA6Q15084 440 aa14.08□□□□□ -0.16
CNIH3-203ENST00000470788 DDX12PQ92771 950 aa14.08□□□□□ -0.16
CNIH3-203ENST00000470788 PROX2Q3B8N5 592 aa14.07□□□□□ -0.16
CNIH3-203ENST00000470788 LAPTM4BQ86VI4 370 aa14.07□□□□□ -0.16
CNIH3-203ENST00000470788 ANKK1Q8NFD2 765 aa14.05□□□□□ -0.16
CNIH3-203ENST00000470788 RBM33Q96EV2 1170 aaKnown RBP14.05□□□□□ -0.16
CNIH3-203ENST00000470788 NBR1Q14596 966 aa14.03□□□□□ -0.16
CNIH3-203ENST00000470788 KIAA1468Q9P260 1216 aa14.03□□□□□ -0.16
CNIH3-203ENST00000470788 ARIH1Q9Y4X5 557 aaPredicted RBP14.02□□□□□ -0.17
CNIH3-203ENST00000470788 MAP3K7O43318 606 aa14.01□□□□□ -0.17
CNIH3-203ENST00000470788 EN1Q05925 392 aaPredicted RBP14□□□□□ -0.17
CNIH3-203ENST00000470788 TRIM6-TRIM34B2RNG4 842 aa13.99□□□□□ -0.17
CNIH3-203ENST00000470788 IFFO2Q5TF58 517 aa13.96□□□□□ -0.17
CNIH3-203ENST00000470788 PACS2Q86VP3 889 aa13.96□□□□□ -0.17
CNIH3-203ENST00000470788 CERKQ8TCT0 537 aa13.95□□□□□ -0.18
CNIH3-203ENST00000470788 ZFRQ96KR1 1074 aaKnown RBP13.95□□□□□ -0.18
CNIH3-203ENST00000470788 SOWAHBA6NEL2 793 aa13.94□□□□□ -0.18
CNIH3-203ENST00000470788 NYAP1Q6ZVC0 841 aa13.94□□□□□ -0.18
CNIH3-203ENST00000470788 GRXCR2A6NFK2 248 aa13.93□□□□□ -0.18
CNIH3-203ENST00000470788 FAM98CQ17RN3 349 aaKnown RBP13.93□□□□□ -0.18
CNIH3-203ENST00000470788 TSR1Q2NL82 804 aaKnown RBP13.91□□□□□ -0.18
CNIH3-203ENST00000470788 SEPT9Q9UHD8 586 aaPredicted RBP13.91□□□□□ -0.18
CNIH3-203ENST00000470788 BCAMP50895 628 aa13.88□□□□□ -0.19
CNIH3-203ENST00000470788 RGS20O76081 388 aa13.87□□□□□ -0.19
CNIH3-203ENST00000470788 LRCH3Q96II8 777 aa13.87□□□□□ -0.19
CNIH3-203ENST00000470788 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.86□□□□□ -0.19
CNIH3-203ENST00000470788 PRSS12P56730 875 aa13.85□□□□□ -0.19
CNIH3-203ENST00000470788 CDCA7LQ96GN5 454 aa13.85□□□□□ -0.19
CNIH3-203ENST00000470788 TSKSQ9UJT2 592 aa13.84□□□□□ -0.19
CNIH3-203ENST00000470788 TSR3Q9UJK0 312 aaKnown RBP13.83□□□□□ -0.2
CNIH3-203ENST00000470788 OSBPP22059 807 aa13.81□□□□□ -0.2
CNIH3-203ENST00000470788 ITGBL1O95965 494 aaPredicted RBP13.8□□□□□ -0.2
CNIH3-203ENST00000470788 WBP1LQ9NX94 342 aa13.8□□□□□ -0.2
CNIH3-203ENST00000470788 A0A0G2JS52 829 aa13.79□□□□□ -0.2
CNIH3-203ENST00000470788 NBPF26B4DH59 902 aa13.79□□□□□ -0.2
CNIH3-203ENST00000470788 ARHGEF1Q92888 912 aaKnown RBP13.79□□□□□ -0.2
CNIH3-203ENST00000470788 HDGFP51858 240 aaKnown RBP13.78□□□□□ -0.2
CNIH3-203ENST00000470788 TSHZ2Q9NRE2 1034 aa13.78□□□□□ -0.2
CNIH3-203ENST00000470788 RBM27Q9P2N5 1060 aaKnown RBP13.78□□□□□ -0.2
CNIH3-203ENST00000470788 HPS5Q9UPZ3 1129 aa13.78□□□□□ -0.2
CNIH3-203ENST00000470788 PPP4CP60510 307 aa13.76□□□□□ -0.21
CNIH3-203ENST00000470788 PRIM1P49642 420 aaKnown RBP13.75□□□□□ -0.21
CNIH3-203ENST00000470788 TATDN2Q93075 761 aa13.75□□□□□ -0.21
CNIH3-203ENST00000470788 PNMA3Q9UL41 463 aa13.75□□□□□ -0.21
CNIH3-203ENST00000470788 KCNC4Q03721 635 aa13.74□□□□□ -0.21
CNIH3-203ENST00000470788 SMAPO00193 183 aa13.72□□□□□ -0.21
CNIH3-203ENST00000470788 SAMD7Q7Z3H4 446 aa13.7□□□□□ -0.22
CNIH3-203ENST00000470788 CDHR5Q9HBB8 845 aa13.7□□□□□ -0.22
CNIH3-203ENST00000470788 FAM198AQ9UFP1 575 aa13.7□□□□□ -0.22
CNIH3-203ENST00000470788 NUDT18Q6ZVK8 323 aa13.68□□□□□ -0.22
CNIH3-203ENST00000470788 P3H3Q8IVL6 736 aa13.68□□□□□ -0.22
CNIH3-203ENST00000470788 NECTIN2Q92692 538 aa13.67□□□□□ -0.22
CNIH3-203ENST00000470788 SLC4A3P48751 1232 aa13.65□□□□□ -0.22
CNIH3-203ENST00000470788 KCNV2Q8TDN2 545 aa13.65□□□□□ -0.22
CNIH3-203ENST00000470788 NPDC1Q9NQX5 325 aaPredicted RBP13.63□□□□□ -0.23
CNIH3-203ENST00000470788 PADI6Q6TGC4 694 aa13.62□□□□□ -0.23
CNIH3-203ENST00000470788 TTC13Q8NBP0 860 aa13.62□□□□□ -0.23
CNIH3-203ENST00000470788 IRX2Q9BZI1 471 aaPredicted RBP13.62□□□□□ -0.23
CNIH3-203ENST00000470788 RNF40O75150 1001 aa13.61□□□□□ -0.23
CNIH3-203ENST00000470788 MLLT3P42568 568 aaPredicted RBP13.6□□□□□ -0.23
CNIH3-203ENST00000470788 C3orf80F5H4A9 247 aa13.59□□□□□ -0.23
CNIH3-203ENST00000470788 SLF2Q8IX21 1173 aa13.59□□□□□ -0.23
CNIH3-203ENST00000470788 IL21Q9HBE4 155 aa13.55□□□□□ -0.24
CNIH3-203ENST00000470788 TJAP1Q5JTD0 557 aa13.54□□□□□ -0.24
CNIH3-203ENST00000470788 PTGDRQ13258 359 aa13.53□□□□□ -0.24
CNIH3-203ENST00000470788 SWT1Q5T5J6 900 aaKnown RBP13.53□□□□□ -0.24
CNIH3-203ENST00000470788 EYA1Q99502 592 aa13.52□□□□□ -0.25
CNIH3-203ENST00000470788 NUTM2FA1L443 756 aa13.51□□□□□ -0.25
CNIH3-203ENST00000470788 PLCB2Q00722 1185 aa13.51□□□□□ -0.25
CNIH3-203ENST00000470788 MTRQ99707 1265 aa13.51□□□□□ -0.25
CNIH3-203ENST00000470788 PRR14Q9BWN1 585 aa13.51□□□□□ -0.25
CNIH3-203ENST00000470788 RBM46Q8TBY0 533 aaKnown RBP13.5□□□□□ -0.25
CNIH3-203ENST00000470788 DNAJB2P25686 324 aa13.47□□□□□ -0.25
CNIH3-203ENST00000470788 APLP1P51693 650 aa13.47□□□□□ -0.25
CNIH3-203ENST00000470788 FCHSD2O94868 740 aa13.46□□□□□ -0.25
CNIH3-203ENST00000470788 SMYD5Q6GMV2 418 aa13.46□□□□□ -0.25
CNIH3-203ENST00000470788 SEMA3EO15041 775 aa13.44□□□□□ -0.26
CNIH3-203ENST00000470788 ADGRG1Q9Y653 693 aa13.42□□□□□ -0.26
CNIH3-203ENST00000470788 GGCXP38435 758 aa13.41□□□□□ -0.26
CNIH3-203ENST00000470788 LAPTM4AQ15012 233 aa13.39□□□□□ -0.27
CNIH3-203ENST00000470788 PPP1R18Q6NYC8 613 aa13.39□□□□□ -0.27
CNIH3-203ENST00000470788 ZNF516Q92618 1163 aa13.39□□□□□ -0.27
CNIH3-203ENST00000470788 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.39□□□□□ -0.27
CNIH3-203ENST00000470788 COPS2P61201 443 aa13.38□□□□□ -0.27
CNIH3-203ENST00000470788 TMEM134Q9H6X4 195 aa13.38□□□□□ -0.27
CNIH3-203ENST00000470788 OATP04181 439 aa13.37□□□□□ -0.27
CNIH3-203ENST00000470788 PCDHB3Q9Y5E6 796 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms