RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 SOWAHBA6NEL2 793 aa7.51□□□□□ -1.21
UBXN4-206ENST00000470687 LAPTM4BQ86VI4 370 aa7.51□□□□□ -1.21
UBXN4-206ENST00000470687 EMILIN3Q9NT22 766 aa7.51□□□□□ -1.21
UBXN4-206ENST00000470687 GTPBP6O43824 516 aaPredicted RBP7.49□□□□□ -1.21
UBXN4-206ENST00000470687 TYW1BQ6NUM6 668 aa7.49□□□□□ -1.21
UBXN4-206ENST00000470687 NYAP1Q6ZVC0 841 aa7.49□□□□□ -1.21
UBXN4-206ENST00000470687 FBXW7Q969H0 707 aa7.49□□□□□ -1.21
UBXN4-206ENST00000470687 Q6ZNB5 142 aa7.48□□□□□ -1.21
UBXN4-206ENST00000470687 ZFRQ96KR1 1074 aaKnown RBP7.48□□□□□ -1.21
UBXN4-206ENST00000470687 PHF14O94880 888 aa7.47□□□□□ -1.21
UBXN4-206ENST00000470687 WBP1LQ9NX94 342 aa7.47□□□□□ -1.21
UBXN4-206ENST00000470687 KIAA1468Q9P260 1216 aa7.47□□□□□ -1.21
UBXN4-206ENST00000470687 KCNC4Q03721 635 aa7.46□□□□□ -1.22
UBXN4-206ENST00000470687 ONECUT3O60422 494 aaPredicted RBP7.45□□□□□ -1.22
UBXN4-206ENST00000470687 SEPT9Q9UHD8 586 aaPredicted RBP7.45□□□□□ -1.22
UBXN4-206ENST00000470687 TRIM6-TRIM34B2RNG4 842 aa7.42□□□□□ -1.22
UBXN4-206ENST00000470687 FAM98CQ17RN3 349 aaKnown RBP7.42□□□□□ -1.22
UBXN4-206ENST00000470687 C6orf132Q5T0Z8 1188 aa7.42□□□□□ -1.22
UBXN4-206ENST00000470687 EPAS1Q99814 870 aa7.42□□□□□ -1.22
UBXN4-206ENST00000470687 TSR3Q9UJK0 312 aaKnown RBP7.41□□□□□ -1.22
UBXN4-206ENST00000470687 LCE2BO14633 110 aa7.4□□□□□ -1.22
UBXN4-206ENST00000470687 CADPS2Q86UW7 1296 aa7.4□□□□□ -1.22
UBXN4-206ENST00000470687 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.4□□□□□ -1.22
UBXN4-206ENST00000470687 HPS5Q9UPZ3 1129 aa7.4□□□□□ -1.22
UBXN4-206ENST00000470687 LAPTM4AQ15012 233 aa7.39□□□□□ -1.23
UBXN4-206ENST00000470687 LRCH3Q96II8 777 aa7.39□□□□□ -1.23
UBXN4-206ENST00000470687 DPYSL4O14531 572 aa7.37□□□□□ -1.23
UBXN4-206ENST00000470687 CAMK2BQ13554 666 aa7.37□□□□□ -1.23
UBXN4-206ENST00000470687 AMER1Q5JTC6 1135 aaPredicted RBP7.37□□□□□ -1.23
UBXN4-206ENST00000470687 RBM33Q96EV2 1170 aaKnown RBP7.37□□□□□ -1.23
UBXN4-206ENST00000470687 GFRA3O60609 400 aa7.34□□□□□ -1.23
UBXN4-206ENST00000470687 TRAF7Q6Q0C0 670 aa7.34□□□□□ -1.23
UBXN4-206ENST00000470687 DDX12PQ92771 950 aa7.34□□□□□ -1.23
UBXN4-206ENST00000470687 TSKSQ9UJT2 592 aa7.34□□□□□ -1.23
UBXN4-206ENST00000470687 TJAP1Q5JTD0 557 aa7.33□□□□□ -1.24
UBXN4-206ENST00000470687 PPP4CP60510 307 aa7.32□□□□□ -1.24
UBXN4-206ENST00000470687 EN1Q05925 392 aaPredicted RBP7.32□□□□□ -1.24
UBXN4-206ENST00000470687 TSR1Q2NL82 804 aaKnown RBP7.32□□□□□ -1.24
UBXN4-206ENST00000470687 PACS2Q86VP3 889 aa7.32□□□□□ -1.24
UBXN4-206ENST00000470687 PRKD2Q9BZL6 878 aa7.31□□□□□ -1.24
UBXN4-206ENST00000470687 NRG2O14511 850 aaPredicted RBP7.3□□□□□ -1.24
UBXN4-206ENST00000470687 MAP3K7O43318 606 aa7.3□□□□□ -1.24
UBXN4-206ENST00000470687 NBR1Q14596 966 aa7.3□□□□□ -1.24
UBXN4-206ENST00000470687 SAMD7Q7Z3H4 446 aa7.29□□□□□ -1.24
UBXN4-206ENST00000470687 MTRQ99707 1265 aa7.29□□□□□ -1.24
UBXN4-206ENST00000470687 SMAPO00193 183 aa7.28□□□□□ -1.24
UBXN4-206ENST00000470687 V9GY48 417 aaPredicted RBP7.28□□□□□ -1.24
UBXN4-206ENST00000470687 PDIA6Q15084 440 aa7.27□□□□□ -1.25
UBXN4-206ENST00000470687 PPP1R18Q6NYC8 613 aa7.27□□□□□ -1.25
UBXN4-206ENST00000470687 CDCA7LQ96GN5 454 aa7.27□□□□□ -1.25
UBXN4-206ENST00000470687 IL21Q9HBE4 155 aa7.27□□□□□ -1.25
UBXN4-206ENST00000470687 FAM198AQ9UFP1 575 aa7.27□□□□□ -1.25
UBXN4-206ENST00000470687 C3orf80F5H4A9 247 aa7.26□□□□□ -1.25
UBXN4-206ENST00000470687 PRSS12P56730 875 aa7.25□□□□□ -1.25
UBXN4-206ENST00000470687 DCAF8L2P0C7V8 631 aa7.24□□□□□ -1.25
UBXN4-206ENST00000470687 ZNF516Q92618 1163 aa7.24□□□□□ -1.25
UBXN4-206ENST00000470687 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.24□□□□□ -1.25
UBXN4-206ENST00000470687 NBPF26B4DH59 902 aa7.23□□□□□ -1.25
UBXN4-206ENST00000470687 CERKQ8TCT0 537 aa7.23□□□□□ -1.25
UBXN4-206ENST00000470687 TATDN2Q93075 761 aa7.23□□□□□ -1.25
UBXN4-206ENST00000470687 SPDYE16A6NNV3 312 aaPredicted RBP7.22□□□□□ -1.25
UBXN4-206ENST00000470687 PRIM1P49642 420 aaKnown RBP7.22□□□□□ -1.25
UBXN4-206ENST00000470687 PNMA3Q9UL41 463 aa7.22□□□□□ -1.25
UBXN4-206ENST00000470687 APLP1P51693 650 aa7.21□□□□□ -1.26
UBXN4-206ENST00000470687 PDZRN3Q9UPQ7 1066 aa7.21□□□□□ -1.26
UBXN4-206ENST00000470687 RNF40O75150 1001 aa7.2□□□□□ -1.26
UBXN4-206ENST00000470687 ZNF787Q6DD87 383 aa7.2□□□□□ -1.26
UBXN4-206ENST00000470687 NKX2-3Q8TAU0 364 aa7.2□□□□□ -1.26
UBXN4-206ENST00000470687 NUDT18Q6ZVK8 323 aa7.18□□□□□ -1.26
UBXN4-206ENST00000470687 CDHR5Q9HBB8 845 aa7.18□□□□□ -1.26
UBXN4-206ENST00000470687 RBM27Q9P2N5 1060 aaKnown RBP7.18□□□□□ -1.26
UBXN4-206ENST00000470687 GRXCR2A6NFK2 248 aa7.16□□□□□ -1.26
UBXN4-206ENST00000470687 GGCXP38435 758 aa7.16□□□□□ -1.26
UBXN4-206ENST00000470687 HDGFP51858 240 aaKnown RBP7.16□□□□□ -1.26
UBXN4-206ENST00000470687 COPS2P61201 443 aa7.15□□□□□ -1.26
UBXN4-206ENST00000470687 NECTIN2Q92692 538 aa7.15□□□□□ -1.26
UBXN4-206ENST00000470687 ZNF775Q96BV0 537 aaPredicted RBP7.15□□□□□ -1.26
UBXN4-206ENST00000470687 OSBPP22059 807 aa7.14□□□□□ -1.27
UBXN4-206ENST00000470687 SWT1Q5T5J6 900 aaKnown RBP7.14□□□□□ -1.27
UBXN4-206ENST00000470687 TMUB1Q9BVT8 246 aa7.14□□□□□ -1.27
UBXN4-206ENST00000470687 ARIH1Q9Y4X5 557 aaPredicted RBP7.14□□□□□ -1.27
UBXN4-206ENST00000470687 TRIM67Q6ZTA4 783 aa7.13□□□□□ -1.27
UBXN4-206ENST00000470687 SLF2Q8IX21 1173 aa7.13□□□□□ -1.27
UBXN4-206ENST00000470687 TTC13Q8NBP0 860 aa7.13□□□□□ -1.27
UBXN4-206ENST00000470687 ZPR1O75312 459 aa7.12□□□□□ -1.27
UBXN4-206ENST00000470687 E2F4Q16254 413 aa7.12□□□□□ -1.27
UBXN4-206ENST00000470687 PADI6Q6TGC4 694 aa7.11□□□□□ -1.27
UBXN4-206ENST00000470687 EMID1Q96A84 441 aaPredicted RBP7.11□□□□□ -1.27
UBXN4-206ENST00000470687 RNF223E7ERA6 249 aa7.09□□□□□ -1.27
UBXN4-206ENST00000470687 NPDC1Q9NQX5 325 aaPredicted RBP7.09□□□□□ -1.27
UBXN4-206ENST00000470687 SLC19A1P41440 591 aa7.08□□□□□ -1.28
UBXN4-206ENST00000470687 BBXQ8WY36 941 aaPredicted RBP7.08□□□□□ -1.28
UBXN4-206ENST00000470687 PCDHB3Q9Y5E6 796 aa7.08□□□□□ -1.28
UBXN4-206ENST00000470687 SLC4A3P48751 1232 aa7.07□□□□□ -1.28
UBXN4-206ENST00000470687 MYT1Q01538 1121 aa7.07□□□□□ -1.28
UBXN4-206ENST00000470687 PKDCCQ504Y2 493 aa7.07□□□□□ -1.28
UBXN4-206ENST00000470687 EYA1Q99502 592 aa7.07□□□□□ -1.28
UBXN4-206ENST00000470687 PRR14Q9BWN1 585 aa7.07□□□□□ -1.28
UBXN4-206ENST00000470687 DGAT1O75907 488 aa7.06□□□□□ -1.28
UBXN4-206ENST00000470687 PRR20EP86478 221 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms