RNA–Protein interactions for RNA: ENST00000470408.5

UBE3C-205, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 5,197 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-205ENST00000470408 NCOA2Q15596 1464 aa12.1□□□□□ -0.47
UBE3C-205ENST00000470408 TROQ12816 1431 aaPredicted RBP12.1□□□□□ -0.47
UBE3C-205ENST00000470408 POGZQ7Z3K3 1410 aa12.09□□□□□ -0.47
UBE3C-205ENST00000470408 AEBP2Q6ZN18 517 aaPredicted RBP12.09□□□□□ -0.47
UBE3C-205ENST00000470408 COG3Q96JB2 828 aa12.09□□□□□ -0.47
UBE3C-205ENST00000470408 CCDC9Q9Y3X0 531 aaKnown RBP12.09□□□□□ -0.47
UBE3C-205ENST00000470408 SYNJ1O43426 1573 aa12.09□□□□□ -0.47
UBE3C-205ENST00000470408 CDK11BP21127 795 aaKnown RBP12.08□□□□□ -0.47
UBE3C-205ENST00000470408 MAGI1Q96QZ7 1491 aaPredicted RBP12.08□□□□□ -0.48
UBE3C-205ENST00000470408 EHBP1L1Q8N3D4 1523 aa12.07□□□□□ -0.48
UBE3C-205ENST00000470408 HFM1A2PYH4 1435 aa12.06□□□□□ -0.48
UBE3C-205ENST00000470408 PEG3Q9GZU2 1588 aa12.06□□□□□ -0.48
UBE3C-205ENST00000470408 DEKP35659 375 aaKnown RBP12.06□□□□□ -0.48
UBE3C-205ENST00000470408 NUTM2DQ5VT03 806 aaPredicted RBP12.06□□□□□ -0.48
UBE3C-205ENST00000470408 HECW1Q76N89 1606 aa12.05□□□□□ -0.48
UBE3C-205ENST00000470408 MCCP23508 829 aa12.05□□□□□ -0.48
UBE3C-205ENST00000470408 RRBP1Q9P2E9 1410 aaKnown RBP12.05□□□□□ -0.48
UBE3C-205ENST00000470408 ST20-MTHFSA0A0A6YYL1 179 aa12.05□□□□□ -0.48
UBE3C-205ENST00000470408 KCNJ4P48050 445 aa12.05□□□□□ -0.48
UBE3C-205ENST00000470408 ZRSR1Q15695 479 aaKnown RBP12.05□□□□□ -0.48
UBE3C-205ENST00000470408 NAP1L5Q96NT1 182 aaPredicted RBP12.04□□□□□ -0.48
UBE3C-205ENST00000470408 SLC52A1Q9NWF4 448 aa12.04□□□□□ -0.48
UBE3C-205ENST00000470408 FGD1P98174 961 aa12.04□□□□□ -0.48
UBE3C-205ENST00000470408 THEMISQ8N1K5 641 aaPredicted RBP12.04□□□□□ -0.48
UBE3C-205ENST00000470408 CENPJQ9HC77 1338 aaPredicted RBP12.03□□□□□ -0.48
UBE3C-205ENST00000470408 HMMRO75330 724 aa12.03□□□□□ -0.48
UBE3C-205ENST00000470408 RBM19Q9Y4C8 960 aaKnown RBP12.03□□□□□ -0.48
UBE3C-205ENST00000470408 MYBBP1AQ9BQG0 1328 aaKnown RBP12.03□□□□□ -0.48
UBE3C-205ENST00000470408 ATF3P18847 181 aa12.03□□□□□ -0.48
UBE3C-205ENST00000470408 USP47Q96K76 1375 aa12.02□□□□□ -0.48
UBE3C-205ENST00000470408 RWDD1Q9H446 243 aaPredicted RBP12.02□□□□□ -0.49
UBE3C-205ENST00000470408 AFAP1Q8N556 730 aa12.02□□□□□ -0.49
UBE3C-205ENST00000470408 CUL7Q14999 1698 aa12.01□□□□□ -0.49
UBE3C-205ENST00000470408 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.01□□□□□ -0.49
UBE3C-205ENST00000470408 ZNF644Q9H582 1327 aaPredicted RBP12.01□□□□□ -0.49
UBE3C-205ENST00000470408 EVA1CP58658 441 aa12.01□□□□□ -0.49
UBE3C-205ENST00000470408 C1orf141Q5JVX7 400 aa12□□□□□ -0.49
UBE3C-205ENST00000470408 PSME1Q06323 249 aa12□□□□□ -0.49
UBE3C-205ENST00000470408 RTN4Q9NQC3 1192 aaKnown RBP12□□□□□ -0.49
UBE3C-205ENST00000470408 PANK3Q9H999 370 aa12□□□□□ -0.49
UBE3C-205ENST00000470408 MINK1Q8N4C8 1332 aaPredicted RBP11.99□□□□□ -0.49
UBE3C-205ENST00000470408 RCAN3Q9UKA8 241 aa11.99□□□□□ -0.49
UBE3C-205ENST00000470408 L1TD1Q5T7N2 865 aaKnown RBP11.99□□□□□ -0.49
UBE3C-205ENST00000470408 RPGRIP1LQ68CZ1 1315 aa11.99□□□□□ -0.49
UBE3C-205ENST00000470408 GPATCH3Q96I76 525 aa11.99□□□□□ -0.49
UBE3C-205ENST00000470408 IQGAP2Q13576 1575 aa11.98□□□□□ -0.49
UBE3C-205ENST00000470408 PMFBP1Q8TBY8 1022 aa11.98□□□□□ -0.49
UBE3C-205ENST00000470408 C9orf84Q5VXU9 1444 aa11.98□□□□□ -0.49
UBE3C-205ENST00000470408 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.98□□□□□ -0.49
UBE3C-205ENST00000470408 ARAP1Q96P48 1450 aa11.98□□□□□ -0.49
UBE3C-205ENST00000470408 RGS3P49796 1198 aa11.97□□□□□ -0.49
UBE3C-205ENST00000470408 PTMAP06454 111 aaKnown RBP11.97□□□□□ -0.49
UBE3C-205ENST00000470408 KIAA1211Q6ZU35 1233 aa11.97□□□□□ -0.49
UBE3C-205ENST00000470408 NUTM2FA1L443 756 aa11.96□□□□□ -0.49
UBE3C-205ENST00000470408 GRIN2AQ12879 1464 aa11.96□□□□□ -0.49
UBE3C-205ENST00000470408 SMC4Q9NTJ3 1288 aa11.96□□□□□ -0.49
UBE3C-205ENST00000470408 SCAPERQ9BY12 1400 aa11.96□□□□□ -0.5
UBE3C-205ENST00000470408 TEFQ10587 303 aa11.96□□□□□ -0.5
UBE3C-205ENST00000470408 TXNDC2Q86VQ3 553 aa11.96□□□□□ -0.5
UBE3C-205ENST00000470408 TAF7LQ5H9L4 462 aa11.95□□□□□ -0.5
UBE3C-205ENST00000470408 LTV1Q96GA3 475 aaPredicted RBP11.95□□□□□ -0.5
UBE3C-205ENST00000470408 DNAJC5BQ9UF47 199 aa11.95□□□□□ -0.5
UBE3C-205ENST00000470408 ZNF330Q9Y3S2 320 aaPredicted RBP11.95□□□□□ -0.5
UBE3C-205ENST00000470408 GPRASP1Q5JY77 1395 aa11.94□□□□□ -0.5
UBE3C-205ENST00000470408 ITPRIPQ8IWB1 547 aa11.94□□□□□ -0.5
UBE3C-205ENST00000470408 PPP6R1Q9UPN7 881 aa11.94□□□□□ -0.5
UBE3C-205ENST00000470408 DIAPH1O60610 1272 aaKnown RBP11.94□□□□□ -0.5
UBE3C-205ENST00000470408 GORABQ5T7V8 394 aa11.93□□□□□ -0.5
UBE3C-205ENST00000470408 SENP3-EIF4A1A0A087X0R7 540 aa11.93□□□□□ -0.5
UBE3C-205ENST00000470408 DNTTIP2Q5QJE6 756 aaKnown RBP11.93□□□□□ -0.5
UBE3C-205ENST00000470408 TSHZ2Q9NRE2 1034 aa11.93□□□□□ -0.5
UBE3C-205ENST00000470408 GTF2E1P29083 439 aaPredicted RBP11.92□□□□□ -0.5
UBE3C-205ENST00000470408 ANKLE2Q86XL3 938 aa11.92□□□□□ -0.5
UBE3C-205ENST00000470408 TTC5Q8N0Z6 440 aa11.92□□□□□ -0.5
UBE3C-205ENST00000470408 E9PSI1 815 aa11.92□□□□□ -0.5
UBE3C-205ENST00000470408 HSP90AB1P08238 724 aaKnown RBP11.92□□□□□ -0.5
UBE3C-205ENST00000470408 ANKRD30BQ9BXX2 1392 aa11.92□□□□□ -0.5
UBE3C-205ENST00000470408 B4GALNT3Q6L9W6 998 aa11.91□□□□□ -0.5
UBE3C-205ENST00000470408 CD109Q6YHK3 1445 aa11.91□□□□□ -0.5
UBE3C-205ENST00000470408 EPRSP07814 1512 aaKnown RBP11.91□□□□□ -0.5
UBE3C-205ENST00000470408 HSCBQ8IWL3 235 aa11.91□□□□□ -0.5
UBE3C-205ENST00000470408 ROCK1Q13464 1354 aa11.91□□□□□ -0.5
UBE3C-205ENST00000470408 HMGB2P26583 209 aaKnown RBP11.91□□□□□ -0.5
UBE3C-205ENST00000470408 KIAA1107Q9UPP5 1409 aa11.91□□□□□ -0.5
UBE3C-205ENST00000470408 MEX3CQ5U5Q3 659 aaKnown RBP11.9□□□□□ -0.5
UBE3C-205ENST00000470408 PROSER2Q86WR7 435 aaPredicted RBP11.9□□□□□ -0.5
UBE3C-205ENST00000470408 SUPT6HQ7KZ85 1726 aaKnown RBP11.9□□□□□ -0.5
UBE3C-205ENST00000470408 RAPGEF4Q8WZA2 1011 aa11.9□□□□□ -0.51
UBE3C-205ENST00000470408 WASHC2AQ641Q2 1341 aa11.89□□□□□ -0.51
UBE3C-205ENST00000470408 NEXNQ0ZGT2 675 aa11.89□□□□□ -0.51
UBE3C-205ENST00000470408 ZNF692Q9BU19 519 aaPredicted RBP11.89□□□□□ -0.51
UBE3C-205ENST00000470408 TIAM1Q13009 1591 aa11.89□□□□□ -0.51
UBE3C-205ENST00000470408 PRKRIP1Q9H875 184 aaPredicted RBP11.89□□□□□ -0.51
UBE3C-205ENST00000470408 G3V3G9 751 aa11.89□□□□□ -0.51
UBE3C-205ENST00000470408 DCAF8Q5TAQ9 597 aa11.89□□□□□ -0.51
UBE3C-205ENST00000470408 CCDC141Q6ZP82 1450 aa11.88□□□□□ -0.51
UBE3C-205ENST00000470408 URB2Q14146 1524 aaKnown RBP11.88□□□□□ -0.51
UBE3C-205ENST00000470408 DDX58O95786 925 aaKnown RBP11.88□□□□□ -0.51
UBE3C-205ENST00000470408 CHMP4CQ96CF2 233 aa11.88□□□□□ -0.51
UBE3C-205ENST00000470408 LRRFIP1Q32MZ4 808 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms