RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 UHRF1BP1LA0JNW5 1464 aa13.01□□□□□ -0.33
TOP3A-203ENST00000469739 RPRD2Q5VT52 1461 aaKnown RBP13.01□□□□□ -0.33
TOP3A-203ENST00000469739 MBD5Q9P267 1494 aa13.01□□□□□ -0.33
TOP3A-203ENST00000469739 NEFLP07196 543 aa13□□□□□ -0.33
TOP3A-203ENST00000469739 CCDC7Q96M83 1385 aa13□□□□□ -0.33
TOP3A-203ENST00000469739 ARHGAP5Q13017 1502 aa12.99□□□□□ -0.33
TOP3A-203ENST00000469739 SYCP2Q9BX26 1530 aa12.99□□□□□ -0.33
TOP3A-203ENST00000469739 CCDC141Q6ZP82 1450 aa12.99□□□□□ -0.33
TOP3A-203ENST00000469739 KIAA1107Q9UPP5 1409 aa12.98□□□□□ -0.33
TOP3A-203ENST00000469739 AFAP1Q8N556 730 aa12.97□□□□□ -0.33
TOP3A-203ENST00000469739 PRKRIP1Q9H875 184 aaPredicted RBP12.97□□□□□ -0.33
TOP3A-203ENST00000469739 ST20-MTHFSA0A0A6YYL1 179 aa12.97□□□□□ -0.33
TOP3A-203ENST00000469739 TEX14Q8IWB6 1497 aa12.96□□□□□ -0.33
TOP3A-203ENST00000469739 SENP3Q9H4L4 574 aaPredicted RBP12.96□□□□□ -0.33
TOP3A-203ENST00000469739 USP47Q96K76 1375 aa12.96□□□□□ -0.33
TOP3A-203ENST00000469739 SALL2Q9Y467 1007 aaPredicted RBP12.95□□□□□ -0.34
TOP3A-203ENST00000469739 MAST1Q9Y2H9 1570 aa12.95□□□□□ -0.34
TOP3A-203ENST00000469739 KDM5DQ9BY66 1539 aa12.95□□□□□ -0.34
TOP3A-203ENST00000469739 NBPF1Q3BBV0 1214 aa12.95□□□□□ -0.34
TOP3A-203ENST00000469739 EIF5BO60841 1220 aaKnown RBP12.94□□□□□ -0.34
TOP3A-203ENST00000469739 CNTLNQ9NXG0 1405 aa12.92□□□□□ -0.34
TOP3A-203ENST00000469739 ARXQ96QS3 562 aa12.92□□□□□ -0.34
TOP3A-203ENST00000469739 PLXNC1O60486 1568 aa12.92□□□□□ -0.34
TOP3A-203ENST00000469739 PLEKHH2Q8IVE3 1493 aa12.91□□□□□ -0.34
TOP3A-203ENST00000469739 ARHGEF12Q9NZN5 1544 aa12.9□□□□□ -0.34
TOP3A-203ENST00000469739 ABCC1P33527 1531 aa12.9□□□□□ -0.34
TOP3A-203ENST00000469739 PLCH2O75038 1416 aa12.9□□□□□ -0.34
TOP3A-203ENST00000469739 EFCAB2Q5VUJ9 269 aa12.89□□□□□ -0.35
TOP3A-203ENST00000469739 UNC13BO14795 1591 aa12.89□□□□□ -0.35
TOP3A-203ENST00000469739 RSPH4AQ5TD94 716 aa12.88□□□□□ -0.35
TOP3A-203ENST00000469739 ROCK2O75116 1388 aaKnown RBP12.88□□□□□ -0.35
TOP3A-203ENST00000469739 WDR7Q9Y4E6 1490 aa12.87□□□□□ -0.35
TOP3A-203ENST00000469739 ARAP3Q8WWN8 1544 aa12.86□□□□□ -0.35
TOP3A-203ENST00000469739 FAM135AQ9P2D6 1515 aa12.86□□□□□ -0.35
TOP3A-203ENST00000469739 SPATA31E1Q6ZUB1 1445 aa12.86□□□□□ -0.35
TOP3A-203ENST00000469739 CCDC144AA2RUR9 1427 aa12.86□□□□□ -0.35
TOP3A-203ENST00000469739 SPAG9O60271 1321 aaKnown RBP12.85□□□□□ -0.35
TOP3A-203ENST00000469739 TMC1Q8TDI8 760 aa12.85□□□□□ -0.35
TOP3A-203ENST00000469739 ABCA9Q8IUA7 1624 aa12.85□□□□□ -0.35
TOP3A-203ENST00000469739 CC2D1BQ5T0F9 858 aaKnown RBP12.84□□□□□ -0.35
TOP3A-203ENST00000469739 TRAPPC8Q9Y2L5 1435 aa12.84□□□□□ -0.35
TOP3A-203ENST00000469739 KIF3BO15066 747 aa12.84□□□□□ -0.35
TOP3A-203ENST00000469739 DUOX2Q9NRD8 1548 aa12.83□□□□□ -0.36
TOP3A-203ENST00000469739 CHGAP10645 457 aaKnown RBP12.83□□□□□ -0.36
TOP3A-203ENST00000469739 IQGAP3Q86VI3 1631 aa12.83□□□□□ -0.36
TOP3A-203ENST00000469739 POLR1AO95602 1720 aaPredicted RBP12.82□□□□□ -0.36
TOP3A-203ENST00000469739 MAGI2Q86UL8 1455 aa12.81□□□□□ -0.36
TOP3A-203ENST00000469739 ZFYVE16Q7Z3T8 1539 aa12.81□□□□□ -0.36
TOP3A-203ENST00000469739 BCORL1Q5H9F3 1711 aa12.8□□□□□ -0.36
TOP3A-203ENST00000469739 ERBINQ96RT1 1412 aa12.8□□□□□ -0.36
TOP3A-203ENST00000469739 ASXL2Q76L83 1435 aa12.79□□□□□ -0.36
TOP3A-203ENST00000469739 OSCARQ8IYS5 282 aa12.79□□□□□ -0.36
TOP3A-203ENST00000469739 HAP1P54257 671 aaPredicted RBP12.79□□□□□ -0.36
TOP3A-203ENST00000469739 RBM19Q9Y4C8 960 aaKnown RBP12.79□□□□□ -0.36
TOP3A-203ENST00000469739 B4GALNT3Q6L9W6 998 aa12.78□□□□□ -0.36
TOP3A-203ENST00000469739 FANCAO15360 1455 aa12.78□□□□□ -0.36
TOP3A-203ENST00000469739 DHX29Q7Z478 1369 aaKnown RBP12.78□□□□□ -0.36
TOP3A-203ENST00000469739 INO80Q9ULG1 1556 aaPredicted RBP12.78□□□□□ -0.36
TOP3A-203ENST00000469739 GGT6Q6P531 493 aa12.77□□□□□ -0.36
TOP3A-203ENST00000469739 SCAPERQ9BY12 1400 aa12.77□□□□□ -0.36
TOP3A-203ENST00000469739 PLA2R1Q13018 1463 aa12.77□□□□□ -0.37
TOP3A-203ENST00000469739 NPM1P06748 294 aaKnown RBP eCLIP12.77□□□□□ -0.37
TOP3A-203ENST00000469739 NUTM2DQ5VT03 806 aaPredicted RBP12.77□□□□□ -0.37
TOP3A-203ENST00000469739 UHRF1BP1Q6BDS2 1440 aa12.76□□□□□ -0.37
TOP3A-203ENST00000469739 KDM5CP41229 1560 aa12.75□□□□□ -0.37
TOP3A-203ENST00000469739 RTEL1-TNFRSF6BF6WH68 1400 aa12.75□□□□□ -0.37
TOP3A-203ENST00000469739 RALGAPBQ86X10 1494 aa12.75□□□□□ -0.37
TOP3A-203ENST00000469739 ATP7AQ04656 1500 aa12.74□□□□□ -0.37
TOP3A-203ENST00000469739 PANK3Q9H999 370 aa12.74□□□□□ -0.37
TOP3A-203ENST00000469739 DEPDC5O75140 1603 aa12.74□□□□□ -0.37
TOP3A-203ENST00000469739 ADGRL1O94910 1474 aa12.73□□□□□ -0.37
TOP3A-203ENST00000469739 HOMEZQ8IX15 550 aa12.73□□□□□ -0.37
TOP3A-203ENST00000469739 DISP3Q9P2K9 1392 aa12.72□□□□□ -0.37
TOP3A-203ENST00000469739 A2MP01023 1474 aa12.72□□□□□ -0.37
TOP3A-203ENST00000469739 PNISRQ8TF01 805 aaKnown RBP12.71□□□□□ -0.37
TOP3A-203ENST00000469739 E9PCH4 1651 aa12.71□□□□□ -0.37
TOP3A-203ENST00000469739 ZBED9Q6R2W3 1325 aa12.71□□□□□ -0.37
TOP3A-203ENST00000469739 PRAG1Q86YV5 1406 aa12.71□□□□□ -0.38
TOP3A-203ENST00000469739 RAPGEF3O95398 923 aa12.71□□□□□ -0.38
TOP3A-203ENST00000469739 TRPM1Q7Z4N2 1603 aa12.7□□□□□ -0.38
TOP3A-203ENST00000469739 CFAP74Q9C0B2 1584 aa12.69□□□□□ -0.38
TOP3A-203ENST00000469739 CFAP70Q5T0N1 1121 aa12.69□□□□□ -0.38
TOP3A-203ENST00000469739 EIF2AK4Q9P2K8 1649 aaKnown RBP12.69□□□□□ -0.38
TOP3A-203ENST00000469739 ATP10AO60312 1499 aa12.69□□□□□ -0.38
TOP3A-203ENST00000469739 KIDINS220Q9ULH0 1771 aa12.69□□□□□ -0.38
TOP3A-203ENST00000469739 CYB5RLQ6IPT4 315 aa12.69□□□□□ -0.38
TOP3A-203ENST00000469739 TESK2Q96S53 571 aa12.69□□□□□ -0.38
TOP3A-203ENST00000469739 CFAP65Q6ZU64 1925 aaKnown RBP12.68□□□□□ -0.38
TOP3A-203ENST00000469739 MSH5O43196 834 aa12.68□□□□□ -0.38
TOP3A-203ENST00000469739 TMF1P82094 1093 aa12.68□□□□□ -0.38
TOP3A-203ENST00000469739 SPHKAPQ2M3C7 1700 aa12.68□□□□□ -0.38
TOP3A-203ENST00000469739 TET3O43151 1660 aa12.68□□□□□ -0.38
TOP3A-203ENST00000469739 MROH1Q8NDA8 1641 aa12.67□□□□□ -0.38
TOP3A-203ENST00000469739 VWDEQ8N2E2 1590 aa12.66□□□□□ -0.38
TOP3A-203ENST00000469739 CDCA7LQ96GN5 454 aa12.66□□□□□ -0.38
TOP3A-203ENST00000469739 PRDM15P57071 1507 aaPredicted RBP12.66□□□□□ -0.38
TOP3A-203ENST00000469739 CEP152O94986 1710 aa12.66□□□□□ -0.38
TOP3A-203ENST00000469739 MYBBP1AQ9BQG0 1328 aaKnown RBP12.66□□□□□ -0.38
TOP3A-203ENST00000469739 ADRA2BP18089 450 aa12.65□□□□□ -0.38
TOP3A-203ENST00000469739 TRPM2O94759 1503 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms