RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 DEKP35659 375 aaKnown RBP19.12■□□□□ 0.65
GPC1-208ENST00000469694 ADGRL1O94910 1474 aa19.12■□□□□ 0.65
GPC1-208ENST00000469694 PLXNC1O60486 1568 aa19.11■□□□□ 0.65
GPC1-208ENST00000469694 KDM2AQ9Y2K7 1162 aa19.11■□□□□ 0.65
GPC1-208ENST00000469694 ARAP3Q8WWN8 1544 aa19.1■□□□□ 0.65
GPC1-208ENST00000469694 DUOX2Q9NRD8 1548 aa19.1■□□□□ 0.65
GPC1-208ENST00000469694 EIF4G2P78344 907 aaKnown RBP eCLIP19.09■□□□□ 0.65
GPC1-208ENST00000469694 ZFYVE16Q7Z3T8 1539 aa19.07■□□□□ 0.64
GPC1-208ENST00000469694 CD109Q6YHK3 1445 aa19.07■□□□□ 0.64
GPC1-208ENST00000469694 RGL3Q3MIN7 710 aa19.07■□□□□ 0.64
GPC1-208ENST00000469694 ERBINQ96RT1 1412 aa19.05■□□□□ 0.64
GPC1-208ENST00000469694 C11orf95C9JLR9 678 aaPredicted RBP19.05■□□□□ 0.64
GPC1-208ENST00000469694 DCAF11Q8TEB1 546 aa19.05■□□□□ 0.64
GPC1-208ENST00000469694 UNC13BO14795 1591 aa19.05■□□□□ 0.64
GPC1-208ENST00000469694 WASHC2AQ641Q2 1341 aa19.04■□□□□ 0.64
GPC1-208ENST00000469694 PLA2R1Q13018 1463 aa19.04■□□□□ 0.64
GPC1-208ENST00000469694 KIF3BO15066 747 aa19.03■□□□□ 0.64
GPC1-208ENST00000469694 RTEL1-TNFRSF6BF6WH68 1400 aa19.02■□□□□ 0.64
GPC1-208ENST00000469694 ATP7AQ04656 1500 aa19.02■□□□□ 0.63
GPC1-208ENST00000469694 CCDC144AA2RUR9 1427 aa19.01■□□□□ 0.63
GPC1-208ENST00000469694 ERICH6BQ5W0A0 696 aa19■□□□□ 0.63
GPC1-208ENST00000469694 RAPGEF3O95398 923 aa18.99■□□□□ 0.63
GPC1-208ENST00000469694 IRX6P78412 446 aaPredicted RBP18.99■□□□□ 0.63
GPC1-208ENST00000469694 IQGAP3Q86VI3 1631 aa18.98■□□□□ 0.63
GPC1-208ENST00000469694 INO80Q9ULG1 1556 aaPredicted RBP18.97■□□□□ 0.63
GPC1-208ENST00000469694 MAGI2Q86UL8 1455 aa18.97■□□□□ 0.63
GPC1-208ENST00000469694 RIMBP3CA6NJZ7 1639 aa18.97■□□□□ 0.63
GPC1-208ENST00000469694 RIMBP3BA6NNM3 1639 aa18.97■□□□□ 0.63
GPC1-208ENST00000469694 RIMBP3Q9UFD9 1639 aa18.97■□□□□ 0.63
GPC1-208ENST00000469694 PPP4R2Q9NY27 417 aa18.95■□□□□ 0.62
GPC1-208ENST00000469694 SPATA31E1Q6ZUB1 1445 aa18.94■□□□□ 0.62
GPC1-208ENST00000469694 ZNF518AQ6AHZ1 1483 aa18.94■□□□□ 0.62
GPC1-208ENST00000469694 HNRNPUQ00839 825 aaKnown RBP eCLIP18.94■□□□□ 0.62
GPC1-208ENST00000469694 DHX29Q7Z478 1369 aaKnown RBP18.93■□□□□ 0.62
GPC1-208ENST00000469694 USP47Q96K76 1375 aa18.92■□□□□ 0.62
GPC1-208ENST00000469694 CARD11Q9BXL7 1154 aa18.92■□□□□ 0.62
GPC1-208ENST00000469694 POLR3GLQ9BT43 218 aa18.92■□□□□ 0.62
GPC1-208ENST00000469694 KIDINS220Q9ULH0 1771 aa18.91■□□□□ 0.62
GPC1-208ENST00000469694 POGZQ7Z3K3 1410 aa18.91■□□□□ 0.62
GPC1-208ENST00000469694 FAM69CQ0P6D2 419 aa18.9■□□□□ 0.62
GPC1-208ENST00000469694 KIF7Q2M1P5 1343 aa18.9■□□□□ 0.62
GPC1-208ENST00000469694 CCDC7Q96M83 1385 aa18.9■□□□□ 0.62
GPC1-208ENST00000469694 ANO8Q9HCE9 1232 aaPredicted RBP18.89■□□□□ 0.61
GPC1-208ENST00000469694 UHRF1BP1Q6BDS2 1440 aa18.89■□□□□ 0.61
GPC1-208ENST00000469694 NOP58Q9Y2X3 529 aaKnown RBP18.89■□□□□ 0.61
GPC1-208ENST00000469694 NBPF1Q3BBV0 1214 aa18.88■□□□□ 0.61
GPC1-208ENST00000469694 GGT6Q6P531 493 aa18.88■□□□□ 0.61
GPC1-208ENST00000469694 A2MP01023 1474 aa18.87■□□□□ 0.61
GPC1-208ENST00000469694 E9PCH4 1651 aa18.87■□□□□ 0.61
GPC1-208ENST00000469694 KANK1Q14678 1352 aa18.86■□□□□ 0.61
GPC1-208ENST00000469694 ATP10AO60312 1499 aa18.85■□□□□ 0.61
GPC1-208ENST00000469694 RALGAPBQ86X10 1494 aa18.85■□□□□ 0.61
GPC1-208ENST00000469694 CNGB1Q14028 1251 aaPredicted RBP18.85■□□□□ 0.61
GPC1-208ENST00000469694 ROCK2O75116 1388 aaKnown RBP18.85■□□□□ 0.61
GPC1-208ENST00000469694 ST20-MTHFSA0A0A6YYL1 179 aa18.84■□□□□ 0.61
GPC1-208ENST00000469694 DEPDC5O75140 1603 aa18.84■□□□□ 0.61
GPC1-208ENST00000469694 NBR1Q14596 966 aa18.84■□□□□ 0.61
GPC1-208ENST00000469694 PRAG1Q86YV5 1406 aa18.83■□□□□ 0.61
GPC1-208ENST00000469694 MROH1Q8NDA8 1641 aa18.83■□□□□ 0.61
GPC1-208ENST00000469694 KDM5CP41229 1560 aa18.83■□□□□ 0.6
GPC1-208ENST00000469694 PAK3O75914 559 aaPredicted RBP18.82■□□□□ 0.6
GPC1-208ENST00000469694 CFAP74Q9C0B2 1584 aa18.82■□□□□ 0.6
GPC1-208ENST00000469694 NEO1Q92859 1461 aa18.81■□□□□ 0.6
GPC1-208ENST00000469694 MLH3Q9UHC1 1453 aa18.81■□□□□ 0.6
GPC1-208ENST00000469694 BCORL1Q5H9F3 1711 aa18.81■□□□□ 0.6
GPC1-208ENST00000469694 FRMPD1Q5SYB0 1578 aa18.8■□□□□ 0.6
GPC1-208ENST00000469694 UGGT1Q9NYU2 1555 aa18.8■□□□□ 0.6
GPC1-208ENST00000469694 CNTLNQ9NXG0 1405 aa18.8■□□□□ 0.6
GPC1-208ENST00000469694 PRDM15P57071 1507 aaPredicted RBP18.79■□□□□ 0.6
GPC1-208ENST00000469694 B4GALNT3Q6L9W6 998 aa18.79■□□□□ 0.6
GPC1-208ENST00000469694 HECW2Q9P2P5 1572 aa18.79■□□□□ 0.6
GPC1-208ENST00000469694 VWDEQ8N2E2 1590 aa18.79■□□□□ 0.6
GPC1-208ENST00000469694 CCDC184Q52MB2 194 aa18.79■□□□□ 0.6
GPC1-208ENST00000469694 ABCA6Q8N139 1617 aa18.78■□□□□ 0.6
GPC1-208ENST00000469694 MAP3K4Q9Y6R4 1608 aa18.78■□□□□ 0.6
GPC1-208ENST00000469694 YEATS2Q9ULM3 1422 aa18.78■□□□□ 0.6
GPC1-208ENST00000469694 PTPRTO14522 1441 aa18.77■□□□□ 0.6
GPC1-208ENST00000469694 TET3O43151 1660 aa18.77■□□□□ 0.6
GPC1-208ENST00000469694 EIF2AK4Q9P2K8 1649 aaKnown RBP18.77■□□□□ 0.59
GPC1-208ENST00000469694 TRPM2O94759 1503 aa18.77■□□□□ 0.59
GPC1-208ENST00000469694 CLTCL1P53675 1640 aa18.76■□□□□ 0.59
GPC1-208ENST00000469694 WASHC2CQ9Y4E1 1318 aa18.75■□□□□ 0.59
GPC1-208ENST00000469694 SALL2Q9Y467 1007 aaPredicted RBP18.75■□□□□ 0.59
GPC1-208ENST00000469694 SPHKAPQ2M3C7 1700 aa18.74■□□□□ 0.59
GPC1-208ENST00000469694 TSPOAP1O95153 1857 aa18.74■□□□□ 0.59
GPC1-208ENST00000469694 DIP2BQ9P265 1576 aa18.74■□□□□ 0.59
GPC1-208ENST00000469694 TRPM1Q7Z4N2 1603 aa18.73■□□□□ 0.59
GPC1-208ENST00000469694 PPRC1Q5VV67 1664 aaKnown RBP18.73■□□□□ 0.59
GPC1-208ENST00000469694 CHGAP10645 457 aaKnown RBP18.72■□□□□ 0.59
GPC1-208ENST00000469694 CEP152O94986 1710 aa18.72■□□□□ 0.59
GPC1-208ENST00000469694 EFCAB6Q5THR3 1501 aa18.71■□□□□ 0.59
GPC1-208ENST00000469694 GLI2P10070 1586 aa18.71■□□□□ 0.59
GPC1-208ENST00000469694 CFAP65Q6ZU64 1925 aaKnown RBP18.71■□□□□ 0.59
GPC1-208ENST00000469694 PRKRIP1Q9H875 184 aaPredicted RBP18.71■□□□□ 0.59
GPC1-208ENST00000469694 NPATQ14207 1427 aa18.7■□□□□ 0.58
GPC1-208ENST00000469694 DIP2CQ9Y2E4 1556 aa18.7■□□□□ 0.58
GPC1-208ENST00000469694 RICTORQ6R327 1708 aa18.7■□□□□ 0.58
GPC1-208ENST00000469694 FAM9BQ8IZU0 186 aa18.69■□□□□ 0.58
GPC1-208ENST00000469694 RTL5Q5HYW3 569 aaPredicted RBP18.68■□□□□ 0.58
GPC1-208ENST00000469694 IPO9Q96P70 1041 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms