RNA–Protein interactions for RNA: ENST00000469565.6

LMNA-210, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-210ENST00000469565 PTPRTO14522 1441 aa20.58■□□□□ 0.88
LMNA-210ENST00000469565 SPATA31D1Q6ZQQ2 1576 aa20.58■□□□□ 0.88
LMNA-210ENST00000469565 A2MP01023 1474 aa20.56■□□□□ 0.88
LMNA-210ENST00000469565 PLXNC1O60486 1568 aa20.56■□□□□ 0.88
LMNA-210ENST00000469565 KIF15Q9NS87 1388 aa20.56■□□□□ 0.88
LMNA-210ENST00000469565 NCOA1Q15788 1441 aa20.55■□□□□ 0.88
LMNA-210ENST00000469565 ESF1Q9H501 851 aaKnown RBP20.54■□□□□ 0.88
LMNA-210ENST00000469565 ADGRL2O95490 1459 aa20.54■□□□□ 0.88
LMNA-210ENST00000469565 DHX29Q7Z478 1369 aaKnown RBP20.53■□□□□ 0.88
LMNA-210ENST00000469565 ROCK1Q13464 1354 aa20.52■□□□□ 0.88
LMNA-210ENST00000469565 TRIM26Q12899 539 aaPredicted RBP20.52■□□□□ 0.88
LMNA-210ENST00000469565 DUOX2Q9NRD8 1548 aa20.52■□□□□ 0.87
LMNA-210ENST00000469565 C3P01024 1663 aa20.51■□□□□ 0.87
LMNA-210ENST00000469565 KIF3BO15066 747 aa20.51■□□□□ 0.87
LMNA-210ENST00000469565 REREQ9P2R6 1566 aa20.5■□□□□ 0.87
LMNA-210ENST00000469565 IQSEC2Q5JU85 1478 aa20.5■□□□□ 0.87
LMNA-210ENST00000469565 LTBP4Q8N2S1 1624 aa20.49■□□□□ 0.87
LMNA-210ENST00000469565 GGT6Q6P531 493 aa20.48■□□□□ 0.87
LMNA-210ENST00000469565 ANKRD50Q9ULJ7 1429 aa20.45■□□□□ 0.86
LMNA-210ENST00000469565 AGLP35573 1532 aa20.45■□□□□ 0.86
LMNA-210ENST00000469565 ERBINQ96RT1 1412 aa20.44■□□□□ 0.86
LMNA-210ENST00000469565 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.43■□□□□ 0.866e-12■■■□□ 15.8
LMNA-210ENST00000469565 NAIPQ13075 1403 aa20.42■□□□□ 0.86
LMNA-210ENST00000469565 CNTLNQ9NXG0 1405 aa20.42■□□□□ 0.86
LMNA-210ENST00000469565 EIF2AK4Q9P2K8 1649 aaKnown RBP20.42■□□□□ 0.86
LMNA-210ENST00000469565 GCC2Q8IWJ2 1684 aa20.42■□□□□ 0.86
LMNA-210ENST00000469565 HFM1A2PYH4 1435 aa20.4■□□□□ 0.86
LMNA-210ENST00000469565 CAMSAP1Q5T5Y3 1602 aa20.38■□□□□ 0.85
LMNA-210ENST00000469565 SETD5Q9C0A6 1442 aa20.36■□□□□ 0.85
LMNA-210ENST00000469565 NPATQ14207 1427 aa20.36■□□□□ 0.85
LMNA-210ENST00000469565 UBAP1LF5GYI3 381 aa20.35■□□□□ 0.85
LMNA-210ENST00000469565 TRIM52Q96A61 297 aa20.35■□□□□ 0.85
LMNA-210ENST00000469565 RNF17Q9BXT8 1623 aaKnown RBP20.35■□□□□ 0.85
LMNA-210ENST00000469565 WASHC2CQ9Y4E1 1318 aa20.34■□□□□ 0.85
LMNA-210ENST00000469565 PCGF6Q9BYE7 350 aa20.34■□□□□ 0.85
LMNA-210ENST00000469565 KANK1Q14678 1352 aa20.34■□□□□ 0.85
LMNA-210ENST00000469565 NCKAP5LQ9HCH0 1330 aa20.33■□□□□ 0.85
LMNA-210ENST00000469565 ZNF335Q9H4Z2 1342 aaPredicted RBP20.32■□□□□ 0.84
LMNA-210ENST00000469565 PPP6R1Q9UPN7 881 aa20.32■□□□□ 0.84
LMNA-210ENST00000469565 ZMYM3Q14202 1370 aa20.32■□□□□ 0.84
LMNA-210ENST00000469565 MROH2AA6NES4 1674 aa20.32■□□□□ 0.84
LMNA-210ENST00000469565 CLTCQ00610 1675 aaKnown RBP20.32■□□□□ 0.84
LMNA-210ENST00000469565 CEP152O94986 1710 aa20.31■□□□□ 0.84
LMNA-210ENST00000469565 CFAP65Q6ZU64 1925 aaKnown RBP20.31■□□□□ 0.84
LMNA-210ENST00000469565 DEPDC5O75140 1603 aa20.31■□□□□ 0.84
LMNA-210ENST00000469565 MROH1Q8NDA8 1641 aa20.3■□□□□ 0.84
LMNA-210ENST00000469565 RAB3GAP2Q9H2M9 1393 aa20.3■□□□□ 0.84
LMNA-210ENST00000469565 PKD2Q13563 968 aa20.29■□□□□ 0.84
LMNA-210ENST00000469565 NUP155O75694 1391 aa20.29■□□□□ 0.84
LMNA-210ENST00000469565 UNC13BO14795 1591 aa20.28■□□□□ 0.84
LMNA-210ENST00000469565 PRDM15P57071 1507 aaPredicted RBP20.27■□□□□ 0.84
LMNA-210ENST00000469565 KDM5DQ9BY66 1539 aa20.27■□□□□ 0.83
LMNA-210ENST00000469565 PLA2R1Q13018 1463 aa20.24■□□□□ 0.83
LMNA-210ENST00000469565 ABCC3O15438 1527 aa20.24■□□□□ 0.83
LMNA-210ENST00000469565 ZC3H13Q5T200 1668 aaKnown RBP20.24■□□□□ 0.83
LMNA-210ENST00000469565 MYO3AQ8NEV4 1616 aa20.22■□□□□ 0.83
LMNA-210ENST00000469565 ZNF142P52746 1687 aaPredicted RBP20.22■□□□□ 0.83
LMNA-210ENST00000469565 IQGAP3Q86VI3 1631 aa20.21■□□□□ 0.83
LMNA-210ENST00000469565 FAM135AQ9P2D6 1515 aa20.21■□□□□ 0.83
LMNA-210ENST00000469565 VWDEQ8N2E2 1590 aa20.21■□□□□ 0.83
LMNA-210ENST00000469565 SLC4A1APQ9BWU0 796 aaKnown RBP20.2■□□□□ 0.82
LMNA-210ENST00000469565 ACIN1Q9UKV3 1341 aaKnown RBP20.2■□□□□ 0.82
LMNA-210ENST00000469565 CEP170BQ9Y4F5 1589 aaPredicted RBP20.2■□□□□ 0.82
LMNA-210ENST00000469565 HRCP23327 699 aa20.19■□□□□ 0.82
LMNA-210ENST00000469565 TET3O43151 1660 aa20.17■□□□□ 0.82
LMNA-210ENST00000469565 SCAF1Q9H7N4 1312 aaKnown RBP20.17■□□□□ 0.82
LMNA-210ENST00000469565 FBXO31Q5XUX0 539 aaPredicted RBP20.16■□□□□ 0.82
LMNA-210ENST00000469565 LMTK2Q8IWU2 1503 aa20.16■□□□□ 0.82
LMNA-210ENST00000469565 TOM1O60784 492 aa20.15■□□□□ 0.82
LMNA-210ENST00000469565 HSPA1LP34931 641 aa20.15■□□□□ 0.82
LMNA-210ENST00000469565 MPHOSPH9Q99550 1183 aa20.15■□□□□ 0.82
LMNA-210ENST00000469565 PZPP20742 1482 aa20.14■□□□□ 0.81
LMNA-210ENST00000469565 PIP4K2BP78356 416 aa20.14■□□□□ 0.81
LMNA-210ENST00000469565 E9PCH4 1651 aa20.13■□□□□ 0.81
LMNA-210ENST00000469565 MED1Q15648 1581 aaPredicted RBP20.12■□□□□ 0.81
LMNA-210ENST00000469565 EFCAB6Q5THR3 1501 aa20.12■□□□□ 0.81
LMNA-210ENST00000469565 ARHGAP31Q2M1Z3 1444 aa20.1■□□□□ 0.81
LMNA-210ENST00000469565 FOXD1Q16676 465 aa20.1■□□□□ 0.81
LMNA-210ENST00000469565 A2ML1A8K2U0 1454 aa20.1■□□□□ 0.81
LMNA-210ENST00000469565 CPS1P31327 1500 aa20.08■□□□□ 0.81
LMNA-210ENST00000469565 ERVK-7P63135 1459 aa20.06■□□□□ 0.8
LMNA-210ENST00000469565 RPRD2Q5VT52 1461 aaKnown RBP20.06■□□□□ 0.8
LMNA-210ENST00000469565 TNRQ92752 1358 aa20.06■□□□□ 0.8
LMNA-210ENST00000469565 PHF23Q9BUL5 403 aaPredicted RBP20.05■□□□□ 0.8
LMNA-210ENST00000469565 POLR1AO95602 1720 aaPredicted RBP20.05■□□□□ 0.8
LMNA-210ENST00000469565 SPHKAPQ2M3C7 1700 aa20.03■□□□□ 0.8
LMNA-210ENST00000469565 ANKLE2Q86XL3 938 aa20.01■□□□□ 0.79
LMNA-210ENST00000469565 NOS1P29475 1434 aa20.01■□□□□ 0.79
LMNA-210ENST00000469565 NEURL4Q96JN8 1562 aa20■□□□□ 0.79
LMNA-210ENST00000469565 CHGAP10645 457 aaKnown RBP19.99■□□□□ 0.79
LMNA-210ENST00000469565 STAG3Q9UJ98 1225 aa19.99■□□□□ 0.79
LMNA-210ENST00000469565 SYNMO15061 1565 aa19.99■□□□□ 0.79
LMNA-210ENST00000469565 THEMISQ8N1K5 641 aaPredicted RBP19.98■□□□□ 0.79
LMNA-210ENST00000469565 IDI1Q13907 227 aa19.97■□□□□ 0.79
LMNA-210ENST00000469565 SLC52A1Q9NWF4 448 aa19.97■□□□□ 0.79
LMNA-210ENST00000469565 DHX57Q6P158 1386 aaKnown RBP19.95■□□□□ 0.79
LMNA-210ENST00000469565 UGGT1Q9NYU2 1555 aa19.95■□□□□ 0.78
LMNA-210ENST00000469565 NLRP1Q9C000 1473 aa19.94■□□□□ 0.78
LMNA-210ENST00000469565 TRPM2O94759 1503 aa19.93■□□□□ 0.78
LMNA-210ENST00000469565 PIK3C2BO00750 1634 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms