RNA–Protein interactions for RNA: ENST00000469336.1

UBE3C-204, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-204ENST00000469336 COL9A1P20849 921 aa12.93□□□□□ -0.34
UBE3C-204ENST00000469336 RBM33Q96EV2 1170 aaKnown RBP12.92□□□□□ -0.34
UBE3C-204ENST00000469336 PDIA6Q15084 440 aa12.91□□□□□ -0.34
UBE3C-204ENST00000469336 PROX2Q3B8N5 592 aa12.9□□□□□ -0.34
UBE3C-204ENST00000469336 KCTD12Q96CX2 325 aaKnown RBP12.9□□□□□ -0.34
UBE3C-204ENST00000469336 FBXW7Q969H0 707 aa12.89□□□□□ -0.35
UBE3C-204ENST00000469336 STAC3Q96MF2 364 aa12.89□□□□□ -0.35
UBE3C-204ENST00000469336 SLC4A5Q9BY07 1137 aa12.88□□□□□ -0.35
UBE3C-204ENST00000469336 BHMG1C9JSJ3 638 aaPredicted RBP12.87□□□□□ -0.35
UBE3C-204ENST00000469336 NBR1Q14596 966 aa12.87□□□□□ -0.35
UBE3C-204ENST00000469336 EPAS1Q99814 870 aa12.87□□□□□ -0.35
UBE3C-204ENST00000469336 PPP1R3GB7ZBB8 358 aa12.86□□□□□ -0.35
UBE3C-204ENST00000469336 C6orf132Q5T0Z8 1188 aa12.86□□□□□ -0.35
UBE3C-204ENST00000469336 GRXCR2A6NFK2 248 aa12.84□□□□□ -0.35
UBE3C-204ENST00000469336 PRIM1P49642 420 aaKnown RBP12.84□□□□□ -0.35
UBE3C-204ENST00000469336 TSR1Q2NL82 804 aaKnown RBP12.84□□□□□ -0.35
UBE3C-204ENST00000469336 SPDYE16A6NNV3 312 aaPredicted RBP12.83□□□□□ -0.36
UBE3C-204ENST00000469336 ARIH1Q9Y4X5 557 aaPredicted RBP12.82□□□□□ -0.36
UBE3C-204ENST00000469336 MRPL50Q8N5N7 158 aaKnown RBP12.8□□□□□ -0.36
UBE3C-204ENST00000469336 BCANQ96GW7 911 aa12.8□□□□□ -0.36
UBE3C-204ENST00000469336 HCSTQ9UBK5 93 aa12.8□□□□□ -0.36
UBE3C-204ENST00000469336 MAP3K7O43318 606 aa12.79□□□□□ -0.36
UBE3C-204ENST00000469336 EN1Q05925 392 aaPredicted RBP12.79□□□□□ -0.36
UBE3C-204ENST00000469336 PTPN5P54829 565 aa12.78□□□□□ -0.36
UBE3C-204ENST00000469336 KCNV2Q8TDN2 545 aa12.77□□□□□ -0.37
UBE3C-204ENST00000469336 KIAA1468Q9P260 1216 aa12.77□□□□□ -0.37
UBE3C-204ENST00000469336 RABGEF1Q9UJ41 708 aa12.77□□□□□ -0.37
UBE3C-204ENST00000469336 GOLGA8CPA6NN73 597 aa12.75□□□□□ -0.37
UBE3C-204ENST00000469336 WNT2BQ93097 391 aa12.75□□□□□ -0.37
UBE3C-204ENST00000469336 NBPF3Q9H094 633 aa12.75□□□□□ -0.37
UBE3C-204ENST00000469336 OSBPP22059 807 aa12.73□□□□□ -0.37
UBE3C-204ENST00000469336 CDHR5Q9HBB8 845 aa12.73□□□□□ -0.37
UBE3C-204ENST00000469336 SEPT9Q9UHD8 586 aaPredicted RBP12.73□□□□□ -0.37
UBE3C-204ENST00000469336 THSD4Q6ZMP0 1018 aa12.72□□□□□ -0.37
UBE3C-204ENST00000469336 TRIM6-TRIM34B2RNG4 842 aa12.71□□□□□ -0.37
UBE3C-204ENST00000469336 TSKSQ9UJT2 592 aa12.7□□□□□ -0.38
UBE3C-204ENST00000469336 MLLT3P42568 568 aaPredicted RBP12.69□□□□□ -0.38
UBE3C-204ENST00000469336 PLA2G2EQ9NZK7 142 aa12.69□□□□□ -0.38
UBE3C-204ENST00000469336 ARHGEF1Q92888 912 aaKnown RBP12.68□□□□□ -0.38
UBE3C-204ENST00000469336 FAM198AQ9UFP1 575 aa12.67□□□□□ -0.38
UBE3C-204ENST00000469336 BCAMP50895 628 aa12.66□□□□□ -0.38
UBE3C-204ENST00000469336 ONECUT3O60422 494 aaPredicted RBP12.65□□□□□ -0.38
UBE3C-204ENST00000469336 ZFRQ96KR1 1074 aaKnown RBP12.65□□□□□ -0.38
UBE3C-204ENST00000469336 C3orf80F5H4A9 247 aa12.64□□□□□ -0.39
UBE3C-204ENST00000469336 SMAPO00193 183 aa12.64□□□□□ -0.39
UBE3C-204ENST00000469336 CDCA7LQ96GN5 454 aa12.64□□□□□ -0.39
UBE3C-204ENST00000469336 ANKK1Q8NFD2 765 aa12.63□□□□□ -0.39
UBE3C-204ENST00000469336 PRSS12P56730 875 aa12.62□□□□□ -0.39
UBE3C-204ENST00000469336 LAPTM4BQ86VI4 370 aa12.62□□□□□ -0.39
UBE3C-204ENST00000469336 P3H3Q8IVL6 736 aa12.61□□□□□ -0.39
UBE3C-204ENST00000469336 FAM98CQ17RN3 349 aaKnown RBP12.59□□□□□ -0.39
UBE3C-204ENST00000469336 PACS2Q86VP3 889 aa12.59□□□□□ -0.39
UBE3C-204ENST00000469336 NPDC1Q9NQX5 325 aaPredicted RBP12.59□□□□□ -0.39
UBE3C-204ENST00000469336 SOWAHBA6NEL2 793 aa12.57□□□□□ -0.4
UBE3C-204ENST00000469336 SEMA3EO15041 775 aa12.57□□□□□ -0.4
UBE3C-204ENST00000469336 CERKQ8TCT0 537 aa12.56□□□□□ -0.4
UBE3C-204ENST00000469336 PNMA3Q9UL41 463 aa12.55□□□□□ -0.4
UBE3C-204ENST00000469336 PADI6Q6TGC4 694 aa12.54□□□□□ -0.4
UBE3C-204ENST00000469336 TATDN2Q93075 761 aa12.54□□□□□ -0.4
UBE3C-204ENST00000469336 WBP1LQ9NX94 342 aa12.54□□□□□ -0.4
UBE3C-204ENST00000469336 NUDT18Q6ZVK8 323 aa12.52□□□□□ -0.41
UBE3C-204ENST00000469336 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.52□□□□□ -0.41
UBE3C-204ENST00000469336 LRCH3Q96II8 777 aa12.5□□□□□ -0.41
UBE3C-204ENST00000469336 HPS5Q9UPZ3 1129 aa12.5□□□□□ -0.41
UBE3C-204ENST00000469336 SAMD7Q7Z3H4 446 aa12.49□□□□□ -0.41
UBE3C-204ENST00000469336 NBPF26B4DH59 902 aa12.48□□□□□ -0.41
UBE3C-204ENST00000469336 TTC13Q8NBP0 860 aa12.47□□□□□ -0.41
UBE3C-204ENST00000469336 RBM27Q9P2N5 1060 aaKnown RBP12.46□□□□□ -0.41
UBE3C-204ENST00000469336 TSR3Q9UJK0 312 aaKnown RBP12.46□□□□□ -0.41
UBE3C-204ENST00000469336 NUTM2FA1L443 756 aa12.45□□□□□ -0.42
UBE3C-204ENST00000469336 PTGDRQ13258 359 aa12.45□□□□□ -0.42
UBE3C-204ENST00000469336 RNF40O75150 1001 aa12.41□□□□□ -0.42
UBE3C-204ENST00000469336 FAM161AQ3B820 660 aa12.41□□□□□ -0.42
UBE3C-204ENST00000469336 RBM26Q5T8P6 1007 aaKnown RBP12.41□□□□□ -0.42
UBE3C-204ENST00000469336 TESPA1A2RU30 521 aaPredicted RBP12.4□□□□□ -0.42
UBE3C-204ENST00000469336 PPP4CP60510 307 aa12.4□□□□□ -0.42
UBE3C-204ENST00000469336 SWT1Q5T5J6 900 aaKnown RBP12.38□□□□□ -0.43
UBE3C-204ENST00000469336 EYA1Q99502 592 aa12.38□□□□□ -0.43
UBE3C-204ENST00000469336 ITGBL1O95965 494 aaPredicted RBP12.36□□□□□ -0.43
UBE3C-204ENST00000469336 IFFO2Q5TF58 517 aa12.36□□□□□ -0.43
UBE3C-204ENST00000469336 NYAP1Q6ZVC0 841 aa12.36□□□□□ -0.43
UBE3C-204ENST00000469336 A0A0G2JS52 829 aa12.33□□□□□ -0.44
UBE3C-204ENST00000469336 HDGFP51858 240 aaKnown RBP12.33□□□□□ -0.44
UBE3C-204ENST00000469336 ADGRG1Q9Y653 693 aa12.33□□□□□ -0.44
UBE3C-204ENST00000469336 FCHSD2O94868 740 aa12.32□□□□□ -0.44
UBE3C-204ENST00000469336 APLP1P51693 650 aa12.31□□□□□ -0.44
UBE3C-204ENST00000469336 TPRNQ4KMQ1 711 aa12.31□□□□□ -0.44
UBE3C-204ENST00000469336 FECHP22830 423 aa12.3□□□□□ -0.44
UBE3C-204ENST00000469336 KCNC4Q03721 635 aa12.3□□□□□ -0.44
UBE3C-204ENST00000469336 PRKCSHP14314 528 aaPredicted RBP12.28□□□□□ -0.44
UBE3C-204ENST00000469336 TJAP1Q5JTD0 557 aa12.27□□□□□ -0.45
UBE3C-204ENST00000469336 SMYD5Q6GMV2 418 aa12.27□□□□□ -0.45
UBE3C-204ENST00000469336 RBM46Q8TBY0 533 aaKnown RBP12.27□□□□□ -0.45
UBE3C-204ENST00000469336 RCCD1A6NED2 376 aa12.26□□□□□ -0.45
UBE3C-204ENST00000469336 GPR37O15354 613 aa12.26□□□□□ -0.45
UBE3C-204ENST00000469336 MTRQ99707 1265 aa12.26□□□□□ -0.45
UBE3C-204ENST00000469336 SLF2Q8IX21 1173 aa12.25□□□□□ -0.45
UBE3C-204ENST00000469336 ZNF516Q92618 1163 aa12.25□□□□□ -0.45
UBE3C-204ENST00000469336 DNAJB2P25686 324 aa12.24□□□□□ -0.45
UBE3C-204ENST00000469336 HIC1Q14526 733 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms