RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 AEBP2Q6ZN18 517 aaPredicted RBP11.59□□□□□ -0.55
SMARCE1-207ENST00000469334 HMGXB3Q12766 1538 aa11.58□□□□□ -0.56
SMARCE1-207ENST00000469334 USP19O94966 1318 aa11.58□□□□□ -0.56
SMARCE1-207ENST00000469334 NLRP1Q9C000 1473 aa11.58□□□□□ -0.56
SMARCE1-207ENST00000469334 CC2D2AQ9P2K1 1620 aa11.58□□□□□ -0.56
SMARCE1-207ENST00000469334 NLRP13Q86W25 1043 aa11.58□□□□□ -0.56
SMARCE1-207ENST00000469334 SMAP1Q8IYB5 467 aaPredicted RBP11.58□□□□□ -0.56
SMARCE1-207ENST00000469334 CUL7Q14999 1698 aa11.58□□□□□ -0.56
SMARCE1-207ENST00000469334 RALGAPBQ86X10 1494 aa11.58□□□□□ -0.56
SMARCE1-207ENST00000469334 MTERF4Q7Z6M4 381 aaKnown RBP11.57□□□□□ -0.56
SMARCE1-207ENST00000469334 SKAP1Q86WV1 359 aa11.57□□□□□ -0.56
SMARCE1-207ENST00000469334 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.57□□□□□ -0.56
SMARCE1-207ENST00000469334 TRIM44Q96DX7 344 aaPredicted RBP11.57□□□□□ -0.56
SMARCE1-207ENST00000469334 PANK2Q9BZ23 570 aa11.57□□□□□ -0.56
SMARCE1-207ENST00000469334 ATP1B4Q9UN42 357 aaPredicted RBP11.57□□□□□ -0.56
SMARCE1-207ENST00000469334 PARD3Q8TEW0 1356 aa11.57□□□□□ -0.56
SMARCE1-207ENST00000469334 GRIN2BQ13224 1484 aa11.57□□□□□ -0.56
SMARCE1-207ENST00000469334 SAMD9Q5K651 1589 aa11.56□□□□□ -0.56
SMARCE1-207ENST00000469334 MCM4P33991 863 aa11.56□□□□□ -0.56
SMARCE1-207ENST00000469334 CFTRP13569 1480 aa11.56□□□□□ -0.56
SMARCE1-207ENST00000469334 A0A0U1RQG5 324 aaPredicted RBP11.56□□□□□ -0.56
SMARCE1-207ENST00000469334 PLIN1O60240 522 aa11.56□□□□□ -0.56
SMARCE1-207ENST00000469334 GRPEL1Q9HAV7 217 aa11.56□□□□□ -0.56
SMARCE1-207ENST00000469334 ROCK1Q13464 1354 aa11.56□□□□□ -0.56
SMARCE1-207ENST00000469334 MAPK8IP3Q9UPT6 1336 aa11.55□□□□□ -0.56
SMARCE1-207ENST00000469334 UHRF1BP1Q6BDS2 1440 aa11.55□□□□□ -0.56
SMARCE1-207ENST00000469334 GAPVD1Q14C86 1478 aa11.55□□□□□ -0.56
SMARCE1-207ENST00000469334 SCAPERQ9BY12 1400 aa11.55□□□□□ -0.56
SMARCE1-207ENST00000469334 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.54□□□□□ -0.56
SMARCE1-207ENST00000469334 RRP7BPQ9NSQ0 103 aa11.54□□□□□ -0.56
SMARCE1-207ENST00000469334 CLASP1Q7Z460 1538 aa11.54□□□□□ -0.56
SMARCE1-207ENST00000469334 ERBB4Q15303 1308 aa11.54□□□□□ -0.56
SMARCE1-207ENST00000469334 DDX11L8A8MPP1 907 aa11.53□□□□□ -0.56
SMARCE1-207ENST00000469334 NCLP19338 710 aaKnown RBP11.53□□□□□ -0.56
SMARCE1-207ENST00000469334 KIAA1211Q6ZU35 1233 aa11.53□□□□□ -0.56
SMARCE1-207ENST00000469334 SLKQ9H2G2 1235 aaPredicted RBP11.53□□□□□ -0.56
SMARCE1-207ENST00000469334 ARHGEF12Q9NZN5 1544 aa11.53□□□□□ -0.56
SMARCE1-207ENST00000469334 PDE4CQ08493 712 aa11.53□□□□□ -0.56
SMARCE1-207ENST00000469334 CDCA7LQ96GN5 454 aa11.52□□□□□ -0.57
SMARCE1-207ENST00000469334 TRAK2O60296 914 aa11.51□□□□□ -0.57
SMARCE1-207ENST00000469334 OFD1O75665 1012 aa11.51□□□□□ -0.57
SMARCE1-207ENST00000469334 RGS3P49796 1198 aa11.51□□□□□ -0.57
SMARCE1-207ENST00000469334 UPF2Q9HAU5 1272 aaKnown RBP11.51□□□□□ -0.57
SMARCE1-207ENST00000469334 PTMSP20962 102 aa11.51□□□□□ -0.57
SMARCE1-207ENST00000469334 UTP14CQ5TAP6 766 aaKnown RBP11.51□□□□□ -0.57
SMARCE1-207ENST00000469334 DNMT1P26358 1616 aaKnown RBP11.51□□□□□ -0.57
SMARCE1-207ENST00000469334 ZNF608Q9ULD9 1512 aaPredicted RBP11.5□□□□□ -0.57
SMARCE1-207ENST00000469334 CHMP5Q9NZZ3 219 aa11.5□□□□□ -0.57
SMARCE1-207ENST00000469334 SENP3-EIF4A1A0A087X0R7 540 aa11.5□□□□□ -0.57
SMARCE1-207ENST00000469334 C20orf194Q5TEA3 1177 aa11.5□□□□□ -0.57
SMARCE1-207ENST00000469334 CCDC173Q0VFZ6 552 aa11.49□□□□□ -0.57
SMARCE1-207ENST00000469334 P3H3Q8IVL6 736 aa11.49□□□□□ -0.57
SMARCE1-207ENST00000469334 NINLQ9Y2I6 1382 aa11.49□□□□□ -0.57
SMARCE1-207ENST00000469334 ZSCAN30Q86W11 494 aa11.48□□□□□ -0.57
SMARCE1-207ENST00000469334 POLR3GLQ9BT43 218 aa11.48□□□□□ -0.57
SMARCE1-207ENST00000469334 TBC1D32Q96NH3 1257 aa11.48□□□□□ -0.57
SMARCE1-207ENST00000469334 ARXQ96QS3 562 aa11.48□□□□□ -0.57
SMARCE1-207ENST00000469334 CNGB1Q14028 1251 aaPredicted RBP11.47□□□□□ -0.57
SMARCE1-207ENST00000469334 RIPK4P57078 832 aa11.47□□□□□ -0.57
SMARCE1-207ENST00000469334 PPP1R9BQ96SB3 815 aa11.47□□□□□ -0.57
SMARCE1-207ENST00000469334 TBC1D2Q9BYX2 928 aa11.47□□□□□ -0.57
SMARCE1-207ENST00000469334 ADGBQ8N7X0 1667 aa11.46□□□□□ -0.57
SMARCE1-207ENST00000469334 MAGI3Q5TCQ9 1506 aa11.46□□□□□ -0.57
SMARCE1-207ENST00000469334 PZPP20742 1482 aa11.46□□□□□ -0.57
SMARCE1-207ENST00000469334 SKOR2Q2VWA4 1001 aaPredicted RBP11.46□□□□□ -0.57
SMARCE1-207ENST00000469334 GZF1Q9H116 711 aaPredicted RBP11.46□□□□□ -0.57
SMARCE1-207ENST00000469334 EPRSP07814 1512 aaKnown RBP11.46□□□□□ -0.58
SMARCE1-207ENST00000469334 HS1BP3Q53T59 392 aa11.45□□□□□ -0.58
SMARCE1-207ENST00000469334 KIAA1107Q9UPP5 1409 aa11.45□□□□□ -0.58
SMARCE1-207ENST00000469334 FOXD1Q16676 465 aa11.45□□□□□ -0.58
SMARCE1-207ENST00000469334 DAPK1P53355 1430 aa11.45□□□□□ -0.58
SMARCE1-207ENST00000469334 CHIC2Q9UKJ5 165 aa11.44□□□□□ -0.58
SMARCE1-207ENST00000469334 PLXNC1O60486 1568 aa11.44□□□□□ -0.58
SMARCE1-207ENST00000469334 DYNC1I1O14576 645 aa11.44□□□□□ -0.58
SMARCE1-207ENST00000469334 MSNP26038 577 aaKnown RBP11.44□□□□□ -0.58
SMARCE1-207ENST00000469334 DMTNQ08495 405 aa11.44□□□□□ -0.58
SMARCE1-207ENST00000469334 ANKRD30AQ9BXX3 1397 aa11.43□□□□□ -0.58
SMARCE1-207ENST00000469334 CGNL1Q0VF96 1302 aa11.43□□□□□ -0.58
SMARCE1-207ENST00000469334 DUSP27Q5VZP5 1158 aa11.43□□□□□ -0.58
SMARCE1-207ENST00000469334 ANP32BQ92688 251 aaKnown RBP11.43□□□□□ -0.58
SMARCE1-207ENST00000469334 SLC4A1APQ9BWU0 796 aaKnown RBP11.43□□□□□ -0.58
SMARCE1-207ENST00000469334 IBTKQ9P2D0 1353 aaPredicted RBP11.43□□□□□ -0.58
SMARCE1-207ENST00000469334 LAMC1P11047 1609 aa11.43□□□□□ -0.58
SMARCE1-207ENST00000469334 NCOA3Q9Y6Q9 1424 aa11.42□□□□□ -0.58
SMARCE1-207ENST00000469334 NESP48681 1621 aa11.42□□□□□ -0.58
SMARCE1-207ENST00000469334 CEP170Q5SW79 1584 aa11.41□□□□□ -0.58
SMARCE1-207ENST00000469334 SEC24BO95487 1268 aa11.41□□□□□ -0.58
SMARCE1-207ENST00000469334 ZNF521Q96K83 1311 aa11.41□□□□□ -0.58
SMARCE1-207ENST00000469334 TNNT2P45379 298 aaPredicted RBP11.41□□□□□ -0.58
SMARCE1-207ENST00000469334 CIZ1Q9ULV3 898 aaPredicted RBP11.41□□□□□ -0.58
SMARCE1-207ENST00000469334 ABCA10Q8WWZ4 1543 aa11.4□□□□□ -0.58
SMARCE1-207ENST00000469334 ZNF500O60304 480 aaPredicted RBP11.4□□□□□ -0.58
SMARCE1-207ENST00000469334 CSPP1Q1MSJ5 1256 aa11.4□□□□□ -0.58
SMARCE1-207ENST00000469334 FAM13BQ9NYF5 915 aa11.4□□□□□ -0.58
SMARCE1-207ENST00000469334 NKTRP30414 1462 aaKnown RBP11.39□□□□□ -0.59
SMARCE1-207ENST00000469334 CAMSAP2Q08AD1 1489 aa11.39□□□□□ -0.59
SMARCE1-207ENST00000469334 CARD11Q9BXL7 1154 aa11.39□□□□□ -0.59
SMARCE1-207ENST00000469334 KIF20AO95235 890 aa11.39□□□□□ -0.59
SMARCE1-207ENST00000469334 PDIA4P13667 645 aaKnown RBP11.39□□□□□ -0.59
SMARCE1-207ENST00000469334 GOLGA2Q08379 1002 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms