RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 RICTORQ6R327 1708 aa13.42□□□□□ -0.26
SMC1A-205ENST00000469129 SCAPERQ9BY12 1400 aa13.42□□□□□ -0.26
SMC1A-205ENST00000469129 POGZQ7Z3K3 1410 aa13.41□□□□□ -0.26
SMC1A-205ENST00000469129 RNF17Q9BXT8 1623 aaKnown RBP13.41□□□□□ -0.26
SMC1A-205ENST00000469129 PRDM15P57071 1507 aaPredicted RBP13.4□□□□□ -0.26
SMC1A-205ENST00000469129 SPHKAPQ2M3C7 1700 aa13.4□□□□□ -0.26
SMC1A-205ENST00000469129 DIEXFQ68CQ4 756 aaKnown RBP13.4□□□□□ -0.26
SMC1A-205ENST00000469129 POLR1AO95602 1720 aaPredicted RBP13.39□□□□□ -0.27
SMC1A-205ENST00000469129 PPP1R15AO75807 674 aaPredicted RBP13.39□□□□□ -0.27
SMC1A-205ENST00000469129 E9PCH4 1651 aa13.37□□□□□ -0.27
SMC1A-205ENST00000469129 CEP152O94986 1710 aa13.37□□□□□ -0.27
SMC1A-205ENST00000469129 ABCA6Q8N139 1617 aa13.37□□□□□ -0.27
SMC1A-205ENST00000469129 VWDEQ8N2E2 1590 aa13.37□□□□□ -0.27
SMC1A-205ENST00000469129 MLH3Q9UHC1 1453 aa13.36□□□□□ -0.27
SMC1A-205ENST00000469129 PKD2Q13563 968 aa13.36□□□□□ -0.27
SMC1A-205ENST00000469129 MROH1Q8NDA8 1641 aa13.35□□□□□ -0.27
SMC1A-205ENST00000469129 ATP10AO60312 1499 aa13.34□□□□□ -0.27
SMC1A-205ENST00000469129 ZC3H13Q5T200 1668 aaKnown RBP13.34□□□□□ -0.27
SMC1A-205ENST00000469129 ZMYM4Q5VZL5 1548 aa13.34□□□□□ -0.27
SMC1A-205ENST00000469129 KANK1Q14678 1352 aa13.33□□□□□ -0.27
SMC1A-205ENST00000469129 DIP2CQ9Y2E4 1556 aa13.32□□□□□ -0.28
SMC1A-205ENST00000469129 COL17A1Q9UMD9 1497 aaPredicted RBP13.32□□□□□ -0.28
SMC1A-205ENST00000469129 FOXD1Q16676 465 aa13.32□□□□□ -0.28
SMC1A-205ENST00000469129 TRPM2O94759 1503 aa13.32□□□□□ -0.28
SMC1A-205ENST00000469129 FRMPD1Q5SYB0 1578 aa13.32□□□□□ -0.28
SMC1A-205ENST00000469129 A2MP01023 1474 aa13.31□□□□□ -0.28
SMC1A-205ENST00000469129 AFAP1Q8N556 730 aa13.31□□□□□ -0.28
SMC1A-205ENST00000469129 DHX29Q7Z478 1369 aaKnown RBP13.31□□□□□ -0.28
SMC1A-205ENST00000469129 CCDC144AA2RUR9 1427 aa13.3□□□□□ -0.28
SMC1A-205ENST00000469129 EFCAB6Q5THR3 1501 aa13.3□□□□□ -0.28
SMC1A-205ENST00000469129 KIF1BO60333 1816 aa13.29□□□□□ -0.28
SMC1A-205ENST00000469129 LMTK2Q8IWU2 1503 aa13.29□□□□□ -0.28
SMC1A-205ENST00000469129 NEURL4Q96JN8 1562 aa13.28□□□□□ -0.28
SMC1A-205ENST00000469129 MYT1LQ9UL68 1186 aa13.28□□□□□ -0.28
SMC1A-205ENST00000469129 L3MBTL2Q969R5 705 aa13.27□□□□□ -0.29
SMC1A-205ENST00000469129 UHRF1BP1Q6BDS2 1440 aa13.27□□□□□ -0.29
SMC1A-205ENST00000469129 REREQ9P2R6 1566 aa13.27□□□□□ -0.29
SMC1A-205ENST00000469129 LAMC1P11047 1609 aa13.27□□□□□ -0.29
SMC1A-205ENST00000469129 CAMSAP1Q5T5Y3 1602 aa13.27□□□□□ -0.29
SMC1A-205ENST00000469129 CLTCL1P53675 1640 aa13.26□□□□□ -0.29
SMC1A-205ENST00000469129 TRPM1Q7Z4N2 1603 aa13.26□□□□□ -0.29
SMC1A-205ENST00000469129 RALGAPBQ86X10 1494 aa13.26□□□□□ -0.29
SMC1A-205ENST00000469129 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.25□□□□□ -0.295e-6■■■□□ 16.9
SMC1A-205ENST00000469129 PLA2R1Q13018 1463 aa13.23□□□□□ -0.29
SMC1A-205ENST00000469129 IFT172Q9UG01 1749 aa13.22□□□□□ -0.29
SMC1A-205ENST00000469129 PTPRTO14522 1441 aa13.22□□□□□ -0.29
SMC1A-205ENST00000469129 ARHGEF40Q8TER5 1519 aa13.21□□□□□ -0.29
SMC1A-205ENST00000469129 ABCC3O15438 1527 aa13.2□□□□□ -0.3
SMC1A-205ENST00000469129 KIAA1210Q9ULL0 1709 aa13.2□□□□□ -0.3
SMC1A-205ENST00000469129 KIF3BO15066 747 aa13.2□□□□□ -0.3
SMC1A-205ENST00000469129 EIF4G2P78344 907 aaKnown RBP eCLIP13.2□□□□□ -0.3
SMC1A-205ENST00000469129 MADDQ8WXG6 1647 aa13.19□□□□□ -0.3
SMC1A-205ENST00000469129 RAPGEF3O95398 923 aa13.18□□□□□ -0.3
SMC1A-205ENST00000469129 MROH2AA6NES4 1674 aa13.18□□□□□ -0.3
SMC1A-205ENST00000469129 AEBP2Q6ZN18 517 aaPredicted RBP13.17□□□□□ -0.3
SMC1A-205ENST00000469129 AGLP35573 1532 aa13.17□□□□□ -0.3
SMC1A-205ENST00000469129 PRAG1Q86YV5 1406 aa13.16□□□□□ -0.3
SMC1A-205ENST00000469129 SPATA31E1Q6ZUB1 1445 aa13.15□□□□□ -0.3
SMC1A-205ENST00000469129 PIK3C2BO00750 1634 aa13.15□□□□□ -0.3
SMC1A-205ENST00000469129 NBPF8Q3BBV2 869 aa13.15□□□□□ -0.3
SMC1A-205ENST00000469129 PREX1Q8TCU6 1659 aa13.15□□□□□ -0.31
SMC1A-205ENST00000469129 PPLO60437 1756 aa13.15□□□□□ -0.31
SMC1A-205ENST00000469129 CNTLNQ9NXG0 1405 aa13.14□□□□□ -0.31
SMC1A-205ENST00000469129 SIGLEC1Q9BZZ2 1709 aa13.14□□□□□ -0.31
SMC1A-205ENST00000469129 CFAP65Q6ZU64 1925 aaKnown RBP13.14□□□□□ -0.31
SMC1A-205ENST00000469129 HSPA5P11021 654 aaKnown RBP13.14□□□□□ -0.31
SMC1A-205ENST00000469129 IQGAP1P46940 1657 aa13.14□□□□□ -0.31
SMC1A-205ENST00000469129 YEATS2Q9ULM3 1422 aa13.13□□□□□ -0.31
SMC1A-205ENST00000469129 ADGRB3O60242 1522 aa13.13□□□□□ -0.31
SMC1A-205ENST00000469129 MYOM2P54296 1465 aa13.12□□□□□ -0.31
SMC1A-205ENST00000469129 USP47Q96K76 1375 aa13.12□□□□□ -0.31
SMC1A-205ENST00000469129 KDM4FA0A1W2PPD8 638 aa13.12□□□□□ -0.31
SMC1A-205ENST00000469129 STAC3Q96MF2 364 aa13.12□□□□□ -0.31
SMC1A-205ENST00000469129 ARHGAP31Q2M1Z3 1444 aa13.12□□□□□ -0.31
SMC1A-205ENST00000469129 ZNF326Q5BKZ1 582 aaKnown RBP13.11□□□□□ -0.31
SMC1A-205ENST00000469129 MIER1Q8N108 512 aa13.11□□□□□ -0.31
SMC1A-205ENST00000469129 DCAF11Q8TEB1 546 aa13.11□□□□□ -0.31
SMC1A-205ENST00000469129 CLTCQ00610 1675 aaKnown RBP13.1□□□□□ -0.31
SMC1A-205ENST00000469129 NPATQ14207 1427 aa13.1□□□□□ -0.31
SMC1A-205ENST00000469129 ROCK2O75116 1388 aaKnown RBP13.09□□□□□ -0.31
SMC1A-205ENST00000469129 GPRASP1Q5JY77 1395 aa13.09□□□□□ -0.31
SMC1A-205ENST00000469129 SYNMO15061 1565 aa13.09□□□□□ -0.31
SMC1A-205ENST00000469129 UGGT1Q9NYU2 1555 aa13.09□□□□□ -0.31
SMC1A-205ENST00000469129 CCDC7Q96M83 1385 aa13.07□□□□□ -0.32
SMC1A-205ENST00000469129 DDX10Q13206 875 aaKnown RBP13.07□□□□□ -0.32
SMC1A-205ENST00000469129 HIRIP3Q9BW71 556 aaPredicted RBP13.07□□□□□ -0.32
SMC1A-205ENST00000469129 ARID4BQ4LE39 1312 aaPredicted RBP13.07□□□□□ -0.32
SMC1A-205ENST00000469129 NOS1P29475 1434 aa13.06□□□□□ -0.32
SMC1A-205ENST00000469129 GGT6Q6P531 493 aa13.06□□□□□ -0.32
SMC1A-205ENST00000469129 CARD11Q9BXL7 1154 aa13.06□□□□□ -0.32
SMC1A-205ENST00000469129 WASHC2CQ9Y4E1 1318 aa13.06□□□□□ -0.32
SMC1A-205ENST00000469129 MYO5BQ9ULV0 1848 aa13.06□□□□□ -0.32
SMC1A-205ENST00000469129 CENPBP07199 599 aaPredicted RBP13.05□□□□□ -0.32
SMC1A-205ENST00000469129 KDM2AQ9Y2K7 1162 aa13.05□□□□□ -0.32
SMC1A-205ENST00000469129 RGL3Q3MIN7 710 aa13.04□□□□□ -0.32
SMC1A-205ENST00000469129 WASHC2AQ641Q2 1341 aa13.04□□□□□ -0.32
SMC1A-205ENST00000469129 SETBP1Q9Y6X0 1596 aa13.03□□□□□ -0.32
SMC1A-205ENST00000469129 MYO3AQ8NEV4 1616 aa13.03□□□□□ -0.32
SMC1A-205ENST00000469129 PPP6R1Q9UPN7 881 aa13.03□□□□□ -0.32
SMC1A-205ENST00000469129 NRXN1Q9ULB1 1477 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms