RNA–Protein interactions for RNA: ENST00000468996.2

TGFBR3-205, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-205ENST00000468996 CHIC2Q9UKJ5 165 aa16.53■□□□□ 0.24
TGFBR3-205ENST00000468996 NCOA1Q15788 1441 aa16.53■□□□□ 0.24
TGFBR3-205ENST00000468996 CAMSAP1Q5T5Y3 1602 aa16.52■□□□□ 0.24
TGFBR3-205ENST00000468996 TNRQ92752 1358 aa16.51■□□□□ 0.23
TGFBR3-205ENST00000468996 PKD2Q13563 968 aa16.51■□□□□ 0.23
TGFBR3-205ENST00000468996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.51■□□□□ 0.238e-8■■□□□ 13.8
TGFBR3-205ENST00000468996 FAM50AQ14320 339 aaKnown RBP16.5■□□□□ 0.23
TGFBR3-205ENST00000468996 ABCC5O15440 1437 aa16.49■□□□□ 0.23
TGFBR3-205ENST00000468996 KDM5DQ9BY66 1539 aa16.48■□□□□ 0.23
TGFBR3-205ENST00000468996 MAST1Q9Y2H9 1570 aa16.47■□□□□ 0.23
TGFBR3-205ENST00000468996 FGD6Q6ZV73 1430 aa16.47■□□□□ 0.23
TGFBR3-205ENST00000468996 KIF15Q9NS87 1388 aa16.47■□□□□ 0.23
TGFBR3-205ENST00000468996 PZPP20742 1482 aa16.47■□□□□ 0.23
TGFBR3-205ENST00000468996 CEP170BQ9Y4F5 1589 aaPredicted RBP16.47■□□□□ 0.23
TGFBR3-205ENST00000468996 MYO3AQ8NEV4 1616 aa16.46■□□□□ 0.23
TGFBR3-205ENST00000468996 PTPN23Q9H3S7 1636 aa16.46■□□□□ 0.23
TGFBR3-205ENST00000468996 THEMISQ8N1K5 641 aaPredicted RBP16.46■□□□□ 0.23
TGFBR3-205ENST00000468996 A2ML1A8K2U0 1454 aa16.46■□□□□ 0.23
TGFBR3-205ENST00000468996 DAPK1P53355 1430 aa16.45■□□□□ 0.22
TGFBR3-205ENST00000468996 ZNF335Q9H4Z2 1342 aaPredicted RBP16.45■□□□□ 0.22
TGFBR3-205ENST00000468996 ANKLE2Q86XL3 938 aa16.44■□□□□ 0.22
TGFBR3-205ENST00000468996 PPARGC1BQ86YN6 1023 aaKnown RBP16.44■□□□□ 0.22
TGFBR3-205ENST00000468996 DUOX2Q9NRD8 1548 aa16.44■□□□□ 0.22
TGFBR3-205ENST00000468996 PLA2R1Q13018 1463 aa16.42■□□□□ 0.22
TGFBR3-205ENST00000468996 ANKRD30AQ9BXX3 1397 aa16.42■□□□□ 0.22
TGFBR3-205ENST00000468996 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.42■□□□□ 0.22
TGFBR3-205ENST00000468996 FAM135AQ9P2D6 1515 aa16.42■□□□□ 0.22
TGFBR3-205ENST00000468996 TCOF1Q13428 1488 aaKnown RBP16.41■□□□□ 0.22
TGFBR3-205ENST00000468996 DNMT1P26358 1616 aaKnown RBP16.41■□□□□ 0.22
TGFBR3-205ENST00000468996 ABCC3O15438 1527 aa16.4■□□□□ 0.22
TGFBR3-205ENST00000468996 ZNF142P52746 1687 aaPredicted RBP16.4■□□□□ 0.22
TGFBR3-205ENST00000468996 SHANK2Q9UPX8 1470 aa16.39■□□□□ 0.21
TGFBR3-205ENST00000468996 KANK1Q14678 1352 aa16.38■□□□□ 0.21
TGFBR3-205ENST00000468996 LTBP4Q8N2S1 1624 aa16.38■□□□□ 0.21
TGFBR3-205ENST00000468996 RNF17Q9BXT8 1623 aaKnown RBP16.38■□□□□ 0.21
TGFBR3-205ENST00000468996 ERBINQ96RT1 1412 aa16.37■□□□□ 0.21
TGFBR3-205ENST00000468996 NLRP1Q9C000 1473 aa16.37■□□□□ 0.21
TGFBR3-205ENST00000468996 EIF2AK4Q9P2K8 1649 aaKnown RBP16.37■□□□□ 0.21
TGFBR3-205ENST00000468996 UGGT1Q9NYU2 1555 aa16.35■□□□□ 0.21
TGFBR3-205ENST00000468996 UBAP1LF5GYI3 381 aa16.35■□□□□ 0.21
TGFBR3-205ENST00000468996 ITGAEP38570 1179 aa16.35■□□□□ 0.21
TGFBR3-205ENST00000468996 STAG3Q9UJ98 1225 aa16.35■□□□□ 0.21
TGFBR3-205ENST00000468996 MROH1Q8NDA8 1641 aa16.34■□□□□ 0.21
TGFBR3-205ENST00000468996 ERVK-7P63135 1459 aa16.34■□□□□ 0.21
TGFBR3-205ENST00000468996 CFAP65Q6ZU64 1925 aaKnown RBP16.33■□□□□ 0.21
TGFBR3-205ENST00000468996 CROCC2H7BZ55 1655 aa16.33■□□□□ 0.2
TGFBR3-205ENST00000468996 ZC3H13Q5T200 1668 aaKnown RBP16.32■□□□□ 0.2
TGFBR3-205ENST00000468996 TXNDC2Q86VQ3 553 aa16.32■□□□□ 0.2
TGFBR3-205ENST00000468996 CEP152O94986 1710 aa16.31■□□□□ 0.2
TGFBR3-205ENST00000468996 SPATA31D1Q6ZQQ2 1576 aa16.31■□□□□ 0.2
TGFBR3-205ENST00000468996 NPHP4O75161 1426 aaPredicted RBP16.3■□□□□ 0.2
TGFBR3-205ENST00000468996 ARHGAP31Q2M1Z3 1444 aa16.29■□□□□ 0.2
TGFBR3-205ENST00000468996 IDI1Q13907 227 aa16.29■□□□□ 0.2
TGFBR3-205ENST00000468996 EID1Q9Y6B2 187 aa16.29■□□□□ 0.2
TGFBR3-205ENST00000468996 ANKRD50Q9ULJ7 1429 aa16.28■□□□□ 0.2
TGFBR3-205ENST00000468996 SCAF1Q9H7N4 1312 aaKnown RBP16.28■□□□□ 0.2
TGFBR3-205ENST00000468996 LTKP29376 864 aa16.28■□□□□ 0.2
TGFBR3-205ENST00000468996 PRDM15P57071 1507 aaPredicted RBP16.28■□□□□ 0.2
TGFBR3-205ENST00000468996 IQSEC2Q5JU85 1478 aa16.28■□□□□ 0.2
TGFBR3-205ENST00000468996 NEURL4Q96JN8 1562 aa16.26■□□□□ 0.19
TGFBR3-205ENST00000468996 PIP4K2BP78356 416 aa16.26■□□□□ 0.19
TGFBR3-205ENST00000468996 ADGRL2O95490 1459 aa16.26■□□□□ 0.19
TGFBR3-205ENST00000468996 POLR1AO95602 1720 aaPredicted RBP16.25■□□□□ 0.19
TGFBR3-205ENST00000468996 MED14O60244 1454 aa16.24■□□□□ 0.19
TGFBR3-205ENST00000468996 TOM1O60784 492 aa16.24■□□□□ 0.19
TGFBR3-205ENST00000468996 DEPDC5O75140 1603 aa16.23■□□□□ 0.19
TGFBR3-205ENST00000468996 BCANQ96GW7 911 aa16.22■□□□□ 0.19
TGFBR3-205ENST00000468996 SENP3Q9H4L4 574 aaPredicted RBP16.22■□□□□ 0.19
TGFBR3-205ENST00000468996 SLC52A1Q9NWF4 448 aa16.22■□□□□ 0.19
TGFBR3-205ENST00000468996 TMEM2Q9UHN6 1383 aa16.21■□□□□ 0.19
TGFBR3-205ENST00000468996 SCAF11Q99590 1463 aaKnown RBP16.21■□□□□ 0.19
TGFBR3-205ENST00000468996 CPS1P31327 1500 aa16.2■□□□□ 0.18
TGFBR3-205ENST00000468996 LMTK2Q8IWU2 1503 aa16.2■□□□□ 0.18
TGFBR3-205ENST00000468996 CHGAP10645 457 aaKnown RBP16.2■□□□□ 0.18
TGFBR3-205ENST00000468996 DISP3Q9P2K9 1392 aa16.2■□□□□ 0.18
TGFBR3-205ENST00000468996 UBR1Q8IWV7 1749 aa16.19■□□□□ 0.18
TGFBR3-205ENST00000468996 VWDEQ8N2E2 1590 aa16.19■□□□□ 0.18
TGFBR3-205ENST00000468996 ROCK1Q13464 1354 aa16.19■□□□□ 0.18
TGFBR3-205ENST00000468996 IQGAP1P46940 1657 aa16.18■□□□□ 0.18
TGFBR3-205ENST00000468996 SLC26A8Q96RN1 970 aa16.18■□□□□ 0.18
TGFBR3-205ENST00000468996 NUP155O75694 1391 aa16.17■□□□□ 0.18
TGFBR3-205ENST00000468996 PIK3C2BO00750 1634 aa16.17■□□□□ 0.18
TGFBR3-205ENST00000468996 NOS1P29475 1434 aa16.17■□□□□ 0.18
TGFBR3-205ENST00000468996 ARHGAP23Q9P227 1491 aa16.16■□□□□ 0.18
TGFBR3-205ENST00000468996 SLIT1O75093 1534 aa16.16■□□□□ 0.18
TGFBR3-205ENST00000468996 EFCAB6Q5THR3 1501 aa16.15■□□□□ 0.18
TGFBR3-205ENST00000468996 HSPA1LP34931 641 aa16.15■□□□□ 0.18
TGFBR3-205ENST00000468996 PPP1R15AO75807 674 aaPredicted RBP16.14■□□□□ 0.17
TGFBR3-205ENST00000468996 HDGFP51858 240 aaKnown RBP16.14■□□□□ 0.17
TGFBR3-205ENST00000468996 SYNMO15061 1565 aa16.13■□□□□ 0.17
TGFBR3-205ENST00000468996 RPRD2Q5VT52 1461 aaKnown RBP16.12■□□□□ 0.17
TGFBR3-205ENST00000468996 NUTM2DQ5VT03 806 aaPredicted RBP16.12■□□□□ 0.17
TGFBR3-205ENST00000468996 LRRC7Q96NW7 1537 aa16.12■□□□□ 0.17
TGFBR3-205ENST00000468996 RBM33Q96EV2 1170 aaKnown RBP16.11■□□□□ 0.17
TGFBR3-205ENST00000468996 KCNA6P17658 529 aa16.1■□□□□ 0.17
TGFBR3-205ENST00000468996 PROSER2Q86WR7 435 aaPredicted RBP16.1■□□□□ 0.17
TGFBR3-205ENST00000468996 ILDR2Q71H61 639 aa16.09■□□□□ 0.17
TGFBR3-205ENST00000468996 TET3O43151 1660 aa16.08■□□□□ 0.17
TGFBR3-205ENST00000468996 STRCP1A6NGW2 1772 aa16.08■□□□□ 0.17
TGFBR3-205ENST00000468996 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms