RNA–Protein interactions for RNA: ENST00000468993.1

SMG5-202, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 345 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-202ENST00000468993 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.93□□□□□ -1.14
SMG5-202ENST00000468993 PTGER2P43116 358 aa7.92□□□□□ -1.14
SMG5-202ENST00000468993 ATP1B4Q9UN42 357 aaPredicted RBP7.92□□□□□ -1.14
SMG5-202ENST00000468993 USTQ9Y2C2 406 aa7.92□□□□□ -1.14
SMG5-202ENST00000468993 MAP3K9P80192 1104 aa7.91□□□□□ -1.14
SMG5-202ENST00000468993 TMC2Q8TDI7 906 aa7.91□□□□□ -1.14
SMG5-202ENST00000468993 HSP90B1P14625 803 aaKnown RBP7.9□□□□□ -1.14
SMG5-202ENST00000468993 SSTR3P32745 418 aaPredicted RBP7.9□□□□□ -1.14
SMG5-202ENST00000468993 CALR3Q96L12 384 aaKnown RBP7.9□□□□□ -1.14
SMG5-202ENST00000468993 BEGAINQ9BUH8 593 aa7.9□□□□□ -1.14
SMG5-202ENST00000468993 SNRKQ9NRH2 765 aa7.89□□□□□ -1.15
SMG5-202ENST00000468993 POLR3EQ9NVU0 708 aa7.89□□□□□ -1.15
SMG5-202ENST00000468993 TBC1D12O60347 775 aa7.88□□□□□ -1.15
SMG5-202ENST00000468993 MDM2Q00987 491 aaPredicted RBP7.88□□□□□ -1.15
SMG5-202ENST00000468993 TMEM259Q4ZIN3 620 aa7.88□□□□□ -1.15
SMG5-202ENST00000468993 ILDR1Q86SU0 546 aaPredicted RBP7.88□□□□□ -1.15
SMG5-202ENST00000468993 PBXIP1Q96AQ6 731 aa7.88□□□□□ -1.15
SMG5-202ENST00000468993 RFC5P40937 340 aa7.87□□□□□ -1.15
SMG5-202ENST00000468993 CLK2P49760 499 aaKnown RBP7.87□□□□□ -1.15
SMG5-202ENST00000468993 CCDC27Q2M243 656 aa7.87□□□□□ -1.15
SMG5-202ENST00000468993 PLPP6Q8IY26 295 aa7.87□□□□□ -1.15
SMG5-202ENST00000468993 PELP1Q8IZL8 1130 aaKnown RBP7.87□□□□□ -1.15
SMG5-202ENST00000468993 TMEM106CQ9BVX2 250 aa7.87□□□□□ -1.15
SMG5-202ENST00000468993 SOCS7O14512 581 aa7.86□□□□□ -1.15
SMG5-202ENST00000468993 MYSM1Q5VVJ2 828 aa7.86□□□□□ -1.15
SMG5-202ENST00000468993 GLMNQ92990 594 aa7.86□□□□□ -1.15
SMG5-202ENST00000468993 PUS7Q96PZ0 661 aaKnown RBP7.86□□□□□ -1.15
SMG5-202ENST00000468993 DDX12PQ92771 950 aa7.85□□□□□ -1.15
SMG5-202ENST00000468993 GDPD2Q9HCC8 539 aa7.85□□□□□ -1.15
SMG5-202ENST00000468993 CSB-PGBD3P0DP91 1061 aa7.84□□□□□ -1.15
SMG5-202ENST00000468993 CDK11BP21127 795 aaKnown RBP7.84□□□□□ -1.15
SMG5-202ENST00000468993 PRM3Q9NNZ6 103 aa7.84□□□□□ -1.15
SMG5-202ENST00000468993 FAM217BQ9NTX9 383 aaPredicted RBP7.84□□□□□ -1.15
SMG5-202ENST00000468993 CDK11AQ9UQ88 783 aaPredicted RBP7.84□□□□□ -1.15
SMG5-202ENST00000468993 PRIM1P49642 420 aaKnown RBP7.83□□□□□ -1.16
SMG5-202ENST00000468993 PPP2R2DQ66LE6 453 aa7.83□□□□□ -1.16
SMG5-202ENST00000468993 SND1Q7KZF4 910 aaKnown RBP eCLIP7.83□□□□□ -1.16
SMG5-202ENST00000468993 MTMR14Q8NCE2 650 aa7.83□□□□□ -1.16
SMG5-202ENST00000468993 DIXDC1Q155Q3 683 aa7.82□□□□□ -1.16
SMG5-202ENST00000468993 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.82□□□□□ -1.16
SMG5-202ENST00000468993 USP35Q9P2H5 1018 aa7.82□□□□□ -1.16
SMG5-202ENST00000468993 POM121CA8CG34 1229 aa7.81□□□□□ -1.16
SMG5-202ENST00000468993 MICALL2Q8IY33 904 aa7.81□□□□□ -1.16
SMG5-202ENST00000468993 PHOX2BQ99453 314 aa7.81□□□□□ -1.16
SMG5-202ENST00000468993 IVNS1ABPQ9Y6Y0 642 aa7.81□□□□□ -1.16
SMG5-202ENST00000468993 CECR2Q9BXF3 1484 aa7.81□□□□□ -1.16
SMG5-202ENST00000468993 ABL2P42684 1182 aa7.8□□□□□ -1.16
SMG5-202ENST00000468993 RSPH4AQ5TD94 716 aa7.8□□□□□ -1.16
SMG5-202ENST00000468993 PRKAR2AP13861 404 aaKnown RBP7.79□□□□□ -1.16
SMG5-202ENST00000468993 MYT1LQ9UL68 1186 aa7.79□□□□□ -1.16
SMG5-202ENST00000468993 CUX2O14529 1486 aa7.79□□□□□ -1.16
SMG5-202ENST00000468993 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.78□□□□□ -1.16
SMG5-202ENST00000468993 KIF3CO14782 793 aa7.78□□□□□ -1.16
SMG5-202ENST00000468993 UPF1Q92900 1129 aaKnown RBP eCLIP7.78□□□□□ -1.16
SMG5-202ENST00000468993 TBC1D2Q9BYX2 928 aa7.78□□□□□ -1.16
SMG5-202ENST00000468993 C2orf72A6NCS6 295 aa7.77□□□□□ -1.17
SMG5-202ENST00000468993 NPDC1Q9NQX5 325 aaPredicted RBP7.77□□□□□ -1.17
SMG5-202ENST00000468993 SRPK2P78362 688 aaKnown RBP7.76□□□□□ -1.17
SMG5-202ENST00000468993 CFAP70Q5T0N1 1121 aa7.76□□□□□ -1.17
SMG5-202ENST00000468993 FBXO31Q5XUX0 539 aaPredicted RBP7.76□□□□□ -1.17
SMG5-202ENST00000468993 TBC1D2BQ9UPU7 963 aa7.76□□□□□ -1.17
SMG5-202ENST00000468993 MYT1Q01538 1121 aa7.75□□□□□ -1.17
SMG5-202ENST00000468993 TUSC1Q2TAM9 212 aa7.75□□□□□ -1.17
SMG5-202ENST00000468993 CDHR5Q9HBB8 845 aa7.75□□□□□ -1.17
SMG5-202ENST00000468993 EVI5O60447 810 aa7.74□□□□□ -1.17
SMG5-202ENST00000468993 OATP04181 439 aa7.74□□□□□ -1.17
SMG5-202ENST00000468993 RFX1P22670 979 aa7.74□□□□□ -1.17
SMG5-202ENST00000468993 METTL3Q86U44 580 aaKnown RBP7.74□□□□□ -1.17
SMG5-202ENST00000468993 IGSF5Q9NSI5 407 aa7.74□□□□□ -1.17
SMG5-202ENST00000468993 LIMD1Q9UGP4 676 aa7.74□□□□□ -1.17
SMG5-202ENST00000468993 EN1Q05925 392 aaPredicted RBP7.73□□□□□ -1.17
SMG5-202ENST00000468993 HDGFL1Q5TGJ6 251 aa7.73□□□□□ -1.17
SMG5-202ENST00000468993 VRTNQ9H8Y1 702 aa7.73□□□□□ -1.17
SMG5-202ENST00000468993 RB1CC1Q8TDY2 1594 aa7.72□□□□□ -1.17
SMG5-202ENST00000468993 RBM47A0AV96 593 aaKnown RBP7.72□□□□□ -1.17
SMG5-202ENST00000468993 UNCXA6NJT0 531 aa7.72□□□□□ -1.17
SMG5-202ENST00000468993 DPY19L2Q6NUT2 758 aa7.72□□□□□ -1.17
SMG5-202ENST00000468993 PHF12Q96QT6 1004 aa7.72□□□□□ -1.17
SMG5-202ENST00000468993 GNEQ9Y223 722 aaKnown RBP7.72□□□□□ -1.17
SMG5-202ENST00000468993 CACNB1Q02641 598 aaPredicted RBP7.71□□□□□ -1.18
SMG5-202ENST00000468993 WASHC4Q2M389 1173 aa7.71□□□□□ -1.18
SMG5-202ENST00000468993 RIC3Q7Z5B4 369 aa7.71□□□□□ -1.18
SMG5-202ENST00000468993 ADAMTS19Q8TE59 1207 aa7.71□□□□□ -1.18
SMG5-202ENST00000468993 EPAS1Q99814 870 aa7.71□□□□□ -1.18
SMG5-202ENST00000468993 TMEM121BQ9BXQ6 578 aaPredicted RBP7.71□□□□□ -1.18
SMG5-202ENST00000468993 PPP1R12CQ9BZL4 782 aa7.71□□□□□ -1.18
SMG5-202ENST00000468993 ZRANB1Q9UGI0 708 aa7.71□□□□□ -1.18
SMG5-202ENST00000468993 TRPC6Q9Y210 931 aa7.71□□□□□ -1.18
SMG5-202ENST00000468993 TIE1P35590 1138 aa7.7□□□□□ -1.18
SMG5-202ENST00000468993 B4GALNT3Q6L9W6 998 aa7.7□□□□□ -1.18
SMG5-202ENST00000468993 CARNS1A5YM72 827 aa7.69□□□□□ -1.18
SMG5-202ENST00000468993 SPTLC1O15269 473 aa7.69□□□□□ -1.18
SMG5-202ENST00000468993 MAP3K7O43318 606 aa7.69□□□□□ -1.18
SMG5-202ENST00000468993 PXYLP1Q8TE99 480 aa7.69□□□□□ -1.18
SMG5-202ENST00000468993 NDUFB9Q9Y6M9 179 aa7.69□□□□□ -1.18
SMG5-202ENST00000468993 TMEM88BA6NKF7 163 aa7.68□□□□□ -1.18
SMG5-202ENST00000468993 PHF14O94880 888 aa7.68□□□□□ -1.18
SMG5-202ENST00000468993 ATG7O95352 703 aa7.68□□□□□ -1.18
SMG5-202ENST00000468993 NLRP7Q8WX94 980 aa7.68□□□□□ -1.18
SMG5-202ENST00000468993 TTLL13PA6NNM8 815 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms