RNA–Protein interactions for RNA: ENST00000468273.1

NF1-207, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-207ENST00000468273 UPF1Q92900 1129 aaKnown RBP eCLIP11.77□□□□□ -0.53
NF1-207ENST00000468273 PDIA4P13667 645 aaKnown RBP11.76□□□□□ -0.53
NF1-207ENST00000468273 PLSCR2Q9NRY7 297 aa11.76□□□□□ -0.53
NF1-207ENST00000468273 TMUB1Q9BVT8 246 aa11.75□□□□□ -0.53
NF1-207ENST00000468273 BOLA1Q9Y3E2 137 aa11.74□□□□□ -0.53
NF1-207ENST00000468273 POTEMA6NI47 508 aa11.73□□□□□ -0.53
NF1-207ENST00000468273 POTEJP0CG39 1038 aa11.73□□□□□ -0.53
NF1-207ENST00000468273 SCUBE2Q9NQ36 999 aa11.73□□□□□ -0.53
NF1-207ENST00000468273 ZBTB7CA1YPR0 619 aa11.71□□□□□ -0.53
NF1-207ENST00000468273 IRX5P78411 483 aaPredicted RBP11.7□□□□□ -0.54
NF1-207ENST00000468273 NECTIN2Q92692 538 aa11.7□□□□□ -0.54
NF1-207ENST00000468273 POTEGQ6S5H5 508 aa11.69□□□□□ -0.54
NF1-207ENST00000468273 PROSER2Q86WR7 435 aaPredicted RBP11.69□□□□□ -0.54
NF1-207ENST00000468273 CLCN1P35523 988 aa11.68□□□□□ -0.54
NF1-207ENST00000468273 EVI5O60447 810 aa11.67□□□□□ -0.54
NF1-207ENST00000468273 SKIV2LQ15477 1246 aaKnown RBP11.67□□□□□ -0.54
NF1-207ENST00000468273 FNBP4Q8N3X1 1017 aaPredicted RBP11.67□□□□□ -0.54
NF1-207ENST00000468273 PCDH10Q9P2E7 1040 aa11.67□□□□□ -0.54
NF1-207ENST00000468273 TBC1D12O60347 775 aa11.66□□□□□ -0.54
NF1-207ENST00000468273 TMEM92Q6UXU6 159 aa11.66□□□□□ -0.54
NF1-207ENST00000468273 OCEL1Q9H607 264 aa11.66□□□□□ -0.54
NF1-207ENST00000468273 GPCPD1Q9NPB8 672 aa11.66□□□□□ -0.54
NF1-207ENST00000468273 NPDC1Q9NQX5 325 aaPredicted RBP11.65□□□□□ -0.54
NF1-207ENST00000468273 CCDC9Q9Y3X0 531 aaKnown RBP11.65□□□□□ -0.54
NF1-207ENST00000468273 MDM2Q00987 491 aaPredicted RBP11.64□□□□□ -0.55
NF1-207ENST00000468273 POM121Q96HA1 1249 aa11.64□□□□□ -0.55
NF1-207ENST00000468273 PHOX2BQ99453 314 aa11.64□□□□□ -0.55
NF1-207ENST00000468273 CDHR5Q9HBB8 845 aa11.64□□□□□ -0.55
NF1-207ENST00000468273 POTEFA5A3E0 1075 aa11.63□□□□□ -0.55
NF1-207ENST00000468273 G3V3G9 751 aa11.63□□□□□ -0.55
NF1-207ENST00000468273 IER5LQ5T953 404 aa11.63□□□□□ -0.55
NF1-207ENST00000468273 ZNF777Q9ULD5 760 aaPredicted RBP11.62□□□□□ -0.55
NF1-207ENST00000468273 SSTR3P32745 418 aaPredicted RBP11.61□□□□□ -0.55
NF1-207ENST00000468273 SEC24BO95487 1268 aa11.6□□□□□ -0.55
NF1-207ENST00000468273 EN1Q05925 392 aaPredicted RBP11.6□□□□□ -0.55
NF1-207ENST00000468273 PROCA1Q8NCQ7 364 aaPredicted RBP11.6□□□□□ -0.55
NF1-207ENST00000468273 BEGAINQ9BUH8 593 aa11.59□□□□□ -0.55
NF1-207ENST00000468273 TRAIPQ9BWF2 469 aa11.59□□□□□ -0.55
NF1-207ENST00000468273 ANO8Q9HCE9 1232 aaPredicted RBP11.59□□□□□ -0.55
NF1-207ENST00000468273 SERPINA10Q9UK55 444 aa11.59□□□□□ -0.55
NF1-207ENST00000468273 RAD21O60216 631 aa11.57□□□□□ -0.56
NF1-207ENST00000468273 PTCD2Q8WV60 388 aaKnown RBP11.57□□□□□ -0.56
NF1-207ENST00000468273 CCDC97Q96F63 343 aaPredicted RBP11.57□□□□□ -0.56
NF1-207ENST00000468273 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.57□□□□□ -0.56
NF1-207ENST00000468273 FAM217BQ9NTX9 383 aaPredicted RBP11.57□□□□□ -0.56
NF1-207ENST00000468273 SPDYE5A6NIY4 337 aa11.56□□□□□ -0.56
NF1-207ENST00000468273 L3MBTL3Q96JM7 780 aaPredicted RBP11.55□□□□□ -0.56
NF1-207ENST00000468273 EPAS1Q99814 870 aa11.55□□□□□ -0.56
NF1-207ENST00000468273 COLQQ9Y215 455 aaPredicted RBP11.55□□□□□ -0.56
NF1-207ENST00000468273 COG6Q9Y2V7 657 aa11.55□□□□□ -0.56
NF1-207ENST00000468273 MAP3K7O43318 606 aa11.54□□□□□ -0.56
NF1-207ENST00000468273 PHF14O94880 888 aa11.54□□□□□ -0.56
NF1-207ENST00000468273 LCE2DQ5TA82 110 aaPredicted RBP11.54□□□□□ -0.56
NF1-207ENST00000468273 MYSM1Q5VVJ2 828 aa11.54□□□□□ -0.56
NF1-207ENST00000468273 POLR3EQ9NVU0 708 aa11.54□□□□□ -0.56
NF1-207ENST00000468273 PLCG2P16885 1265 aa11.53□□□□□ -0.56
NF1-207ENST00000468273 FAM163AQ96GL9 167 aaPredicted RBP11.53□□□□□ -0.56
NF1-207ENST00000468273 METTL3Q86U44 580 aaKnown RBP11.51□□□□□ -0.57
NF1-207ENST00000468273 TSR1Q2NL82 804 aaKnown RBP11.5□□□□□ -0.57
NF1-207ENST00000468273 KCTD17Q8N5Z5 321 aa11.5□□□□□ -0.57
NF1-207ENST00000468273 BANK1Q8NDB2 785 aa11.5□□□□□ -0.57
NF1-207ENST00000468273 SLC34A2O95436 690 aa11.49□□□□□ -0.57
NF1-207ENST00000468273 CLK2P49760 499 aaKnown RBP11.49□□□□□ -0.57
NF1-207ENST00000468273 NLRP7Q8WX94 980 aa11.48□□□□□ -0.57
NF1-207ENST00000468273 RBM33Q96EV2 1170 aaKnown RBP11.48□□□□□ -0.57
NF1-207ENST00000468273 SNRKQ9NRH2 765 aa11.48□□□□□ -0.57
NF1-207ENST00000468273 PCDHGA10Q9Y5H3 936 aa11.48□□□□□ -0.57
NF1-207ENST00000468273 RFC5P40937 340 aa11.47□□□□□ -0.57
NF1-207ENST00000468273 FAM161AQ3B820 660 aa11.47□□□□□ -0.57
NF1-207ENST00000468273 ATP1B4Q9UN42 357 aaPredicted RBP11.47□□□□□ -0.57
NF1-207ENST00000468273 OATP04181 439 aa11.46□□□□□ -0.57
NF1-207ENST00000468273 SLAIN1Q8ND83 568 aa11.46□□□□□ -0.57
NF1-207ENST00000468273 PXYLP1Q8TE99 480 aa11.46□□□□□ -0.57
NF1-207ENST00000468273 FBXO31Q5XUX0 539 aaPredicted RBP11.45□□□□□ -0.58
NF1-207ENST00000468273 RETREG2Q8NC44 543 aa11.45□□□□□ -0.58
NF1-207ENST00000468273 TYW1BQ6NUM6 668 aa11.44□□□□□ -0.58
NF1-207ENST00000468273 TBC1D2Q9BYX2 928 aa11.44□□□□□ -0.58
NF1-207ENST00000468273 ZNF330Q9Y3S2 320 aaPredicted RBP11.44□□□□□ -0.58
NF1-207ENST00000468273 ADGRG1Q9Y653 693 aa11.44□□□□□ -0.58
NF1-207ENST00000468273 PPP2R2DQ66LE6 453 aa11.43□□□□□ -0.58
NF1-207ENST00000468273 PADI6Q6TGC4 694 aa11.42□□□□□ -0.58
NF1-207ENST00000468273 TMEM259Q4ZIN3 620 aa11.41□□□□□ -0.58
NF1-207ENST00000468273 FBXW7Q969H0 707 aa11.41□□□□□ -0.58
NF1-207ENST00000468273 DIXDC1Q155Q3 683 aa11.4□□□□□ -0.58
NF1-207ENST00000468273 TTC13Q8NBP0 860 aa11.4□□□□□ -0.58
NF1-207ENST00000468273 MTMR14Q8NCE2 650 aa11.4□□□□□ -0.58
NF1-207ENST00000468273 LIMD1Q9UGP4 676 aa11.4□□□□□ -0.58
NF1-207ENST00000468273 AEBP1Q8IUX7 1158 aa11.39□□□□□ -0.59
NF1-207ENST00000468273 CERKQ8TCT0 537 aa11.39□□□□□ -0.59
NF1-207ENST00000468273 JPH4Q96JJ6 628 aa11.39□□□□□ -0.59
NF1-207ENST00000468273 RBM27Q9P2N5 1060 aaKnown RBP11.38□□□□□ -0.59
NF1-207ENST00000468273 SOCS7O14512 581 aa11.37□□□□□ -0.59
NF1-207ENST00000468273 GDPD2Q9HCC8 539 aa11.37□□□□□ -0.59
NF1-207ENST00000468273 IRF5Q13568 498 aa11.36□□□□□ -0.59
NF1-207ENST00000468273 KDM4FA0A1W2PPD8 638 aa11.35□□□□□ -0.59
NF1-207ENST00000468273 PPP1R15AO75807 674 aaPredicted RBP11.35□□□□□ -0.59
NF1-207ENST00000468273 TUSC1Q2TAM9 212 aa11.35□□□□□ -0.59
NF1-207ENST00000468273 RIC3Q7Z5B4 369 aa11.33□□□□□ -0.6
NF1-207ENST00000468273 PCDHGA4Q9Y5G9 962 aa11.33□□□□□ -0.6
NF1-207ENST00000468273 FOSBP53539 338 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms