RNA–Protein interactions for RNA: ENST00000467762.2

RIF1-209, Transcript of replication timing regulatory factor 1, humanhuman

TSL 4

Gene RIF1, Length 545 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-209ENST00000467762 CADPS2Q86UW7 1296 aa7.89□□□□□ -1.15
RIF1-209ENST00000467762 HMGXB3Q12766 1538 aa7.88□□□□□ -1.15
RIF1-209ENST00000467762 UBTFP17480 764 aaKnown RBP7.88□□□□□ -1.15
RIF1-209ENST00000467762 ZNF316A6NFI3 1004 aaPredicted RBP7.87□□□□□ -1.15
RIF1-209ENST00000467762 SPRYD3Q8NCJ5 442 aa7.87□□□□□ -1.15
RIF1-209ENST00000467762 CCER1Q8TC90 406 aaPredicted RBP7.87□□□□□ -1.15
RIF1-209ENST00000467762 TSHZ2Q9NRE2 1034 aa7.87□□□□□ -1.15
RIF1-209ENST00000467762 TOP2BQ02880 1626 aa7.87□□□□□ -1.15
RIF1-209ENST00000467762 NCAPD3P42695 1498 aa7.87□□□□□ -1.15
RIF1-209ENST00000467762 BIVM-ERCC5R4GMW8 1640 aa7.86□□□□□ -1.15
RIF1-209ENST00000467762 SYNJ1O43426 1573 aa7.86□□□□□ -1.15
RIF1-209ENST00000467762 PPP1R15BQ5SWA1 713 aa7.86□□□□□ -1.15
RIF1-209ENST00000467762 PTCD2Q8WV60 388 aaKnown RBP7.86□□□□□ -1.15
RIF1-209ENST00000467762 LHX6Q9UPM6 363 aa7.85□□□□□ -1.15
RIF1-209ENST00000467762 ERICH3Q5RHP9 1530 aa7.84□□□□□ -1.15
RIF1-209ENST00000467762 KDM4FA0A1W2PPD8 638 aa7.84□□□□□ -1.15
RIF1-209ENST00000467762 SPNS2Q8IVW8 549 aa7.84□□□□□ -1.15
RIF1-209ENST00000467762 PDE4AP27815 886 aa7.83□□□□□ -1.16
RIF1-209ENST00000467762 ZNF687Q8N1G0 1237 aa7.83□□□□□ -1.16
RIF1-209ENST00000467762 UPF1Q92900 1129 aaKnown RBP eCLIP7.83□□□□□ -1.16
RIF1-209ENST00000467762 LARP6Q9BRS8 491 aaKnown RBP7.83□□□□□ -1.16
RIF1-209ENST00000467762 RUSC2Q8N2Y8 1516 aa7.83□□□□□ -1.16
RIF1-209ENST00000467762 CLIP1P30622 1438 aa7.82□□□□□ -1.16
RIF1-209ENST00000467762 NPM2Q86SE8 214 aaKnown RBP7.82□□□□□ -1.16
RIF1-209ENST00000467762 VPS8Q8N3P4 1428 aa7.82□□□□□ -1.16
RIF1-209ENST00000467762 OXER1Q8TDS5 423 aa7.82□□□□□ -1.16
RIF1-209ENST00000467762 PRDM2Q13029 1718 aa7.81□□□□□ -1.16
RIF1-209ENST00000467762 MFSD10Q14728 455 aa7.81□□□□□ -1.16
RIF1-209ENST00000467762 DDX27Q96GQ7 796 aaKnown RBP7.81□□□□□ -1.16
RIF1-209ENST00000467762 MMRN1Q13201 1228 aa7.79□□□□□ -1.16
RIF1-209ENST00000467762 CLSPNQ9HAW4 1339 aa7.78□□□□□ -1.16
RIF1-209ENST00000467762 POTEEQ6S8J3 1075 aa7.78□□□□□ -1.16
RIF1-209ENST00000467762 EMILIN3Q9NT22 766 aa7.77□□□□□ -1.17
RIF1-209ENST00000467762 CFTRP13569 1480 aa7.76□□□□□ -1.17
RIF1-209ENST00000467762 PRXQ9BXM0 1461 aa7.76□□□□□ -1.17
RIF1-209ENST00000467762 TBC1D12O60347 775 aa7.76□□□□□ -1.17
RIF1-209ENST00000467762 KIF27Q86VH2 1401 aa7.76□□□□□ -1.17
RIF1-209ENST00000467762 CENPBP07199 599 aaPredicted RBP7.75□□□□□ -1.17
RIF1-209ENST00000467762 AXIN2Q9Y2T1 843 aa7.75□□□□□ -1.17
RIF1-209ENST00000467762 RAPGEF2Q9Y4G8 1499 aa7.75□□□□□ -1.17
RIF1-209ENST00000467762 DIEXFQ68CQ4 756 aaKnown RBP7.74□□□□□ -1.17
RIF1-209ENST00000467762 LSM11P83369 360 aaKnown RBP eCLIP7.73□□□□□ -1.17
RIF1-209ENST00000467762 PSDA5PKW4 1024 aaPredicted RBP7.72□□□□□ -1.17
RIF1-209ENST00000467762 PBX2P40425 430 aa7.72□□□□□ -1.17
RIF1-209ENST00000467762 EVI5O60447 810 aa7.71□□□□□ -1.18
RIF1-209ENST00000467762 ANKRD13DQ6ZTN6 518 aa7.71□□□□□ -1.18
RIF1-209ENST00000467762 CUX1P39880 1505 aa7.71□□□□□ -1.18
RIF1-209ENST00000467762 MAP3K1Q13233 1512 aa7.71□□□□□ -1.18
RIF1-209ENST00000467762 CAMK2BQ13554 666 aa7.7□□□□□ -1.18
RIF1-209ENST00000467762 PPP4R3BQ5MIZ7 849 aa7.7□□□□□ -1.18
RIF1-209ENST00000467762 PSEN2P49810 448 aa7.69□□□□□ -1.18
RIF1-209ENST00000467762 MAP3K9P80192 1104 aa7.69□□□□□ -1.18
RIF1-209ENST00000467762 ZNF454Q8N9F8 522 aa7.69□□□□□ -1.18
RIF1-209ENST00000467762 ACIN1Q9UKV3 1341 aaKnown RBP7.69□□□□□ -1.18
RIF1-209ENST00000467762 ARHGAP33O14559 1287 aa7.68□□□□□ -1.18
RIF1-209ENST00000467762 DMRTA1Q5VZB9 504 aa7.68□□□□□ -1.18
RIF1-209ENST00000467762 ANO8Q9HCE9 1232 aaPredicted RBP7.68□□□□□ -1.18
RIF1-209ENST00000467762 TTBK1Q5TCY1 1321 aaPredicted RBP7.68□□□□□ -1.18
RIF1-209ENST00000467762 DPYSL4O14531 572 aa7.67□□□□□ -1.18
RIF1-209ENST00000467762 FOSBP53539 338 aa7.67□□□□□ -1.18
RIF1-209ENST00000467762 MYT1Q01538 1121 aa7.67□□□□□ -1.18
RIF1-209ENST00000467762 CADPSQ9ULU8 1353 aa7.67□□□□□ -1.18
RIF1-209ENST00000467762 KCNK17Q96T54 332 aa7.66□□□□□ -1.18
RIF1-209ENST00000467762 RRBP1Q9P2E9 1410 aaKnown RBP7.66□□□□□ -1.18
RIF1-209ENST00000467762 ARAP1Q96P48 1450 aa7.66□□□□□ -1.18
RIF1-209ENST00000467762 CUX2O14529 1486 aa7.65□□□□□ -1.18
RIF1-209ENST00000467762 RNF166Q96A37 237 aaPredicted RBP7.65□□□□□ -1.18
RIF1-209ENST00000467762 JPH4Q96JJ6 628 aa7.65□□□□□ -1.18
RIF1-209ENST00000467762 MYT1LQ9UL68 1186 aa7.65□□□□□ -1.18
RIF1-209ENST00000467762 ADGRD1Q6QNK2 874 aa7.64□□□□□ -1.19
RIF1-209ENST00000467762 ADAM33Q9BZ11 813 aa7.63□□□□□ -1.19
RIF1-209ENST00000467762 BCL2L12Q9HB09 334 aa7.63□□□□□ -1.19
RIF1-209ENST00000467762 FHAD1B1AJZ9 1412 aa7.62□□□□□ -1.19
RIF1-209ENST00000467762 PTGER2P43116 358 aa7.62□□□□□ -1.19
RIF1-209ENST00000467762 PCDHGA10Q9Y5H3 936 aa7.62□□□□□ -1.19
RIF1-209ENST00000467762 IGF1RP08069 1367 aa7.61□□□□□ -1.19
RIF1-209ENST00000467762 ZDHHC16Q969W1 377 aa7.61□□□□□ -1.19
RIF1-209ENST00000467762 ARHGAP35Q9NRY4 1499 aa7.61□□□□□ -1.19
RIF1-209ENST00000467762 CARMIL1Q5VZK9 1371 aa7.6□□□□□ -1.19
RIF1-209ENST00000467762 CC2D2AQ9P2K1 1620 aa7.6□□□□□ -1.19
RIF1-209ENST00000467762 CCNB3Q8WWL7 1395 aa7.59□□□□□ -1.19
RIF1-209ENST00000467762 EFCAB5A4FU69 1503 aa7.59□□□□□ -1.19
RIF1-209ENST00000467762 TK2O00142 265 aa7.59□□□□□ -1.19
RIF1-209ENST00000467762 PTPREP23469 700 aa7.59□□□□□ -1.19
RIF1-209ENST00000467762 PDIA6Q15084 440 aa7.59□□□□□ -1.19
RIF1-209ENST00000467762 E2F4Q16254 413 aa7.59□□□□□ -1.19
RIF1-209ENST00000467762 CUL7Q14999 1698 aa7.59□□□□□ -1.19
RIF1-209ENST00000467762 DNMBPQ6XZF7 1577 aa7.59□□□□□ -1.2
RIF1-209ENST00000467762 HRO43593 1189 aa7.58□□□□□ -1.2
RIF1-209ENST00000467762 KCNH8Q96L42 1107 aa7.58□□□□□ -1.2
RIF1-209ENST00000467762 WDR70Q9NW82 654 aa7.58□□□□□ -1.2
RIF1-209ENST00000467762 TIAM1Q13009 1591 aa7.58□□□□□ -1.2
RIF1-209ENST00000467762 DHX57Q6P158 1386 aaKnown RBP7.58□□□□□ -1.2
RIF1-209ENST00000467762 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.58□□□□□ -1.2
RIF1-209ENST00000467762 AQRO60306 1485 aaKnown RBP eCLIP7.57□□□□□ -1.26e-7■■■■■ 34.9
RIF1-209ENST00000467762 FGD5Q6ZNL6 1462 aa7.57□□□□□ -1.2
RIF1-209ENST00000467762 PHF14O94880 888 aa7.57□□□□□ -1.2
RIF1-209ENST00000467762 DDX12PQ92771 950 aa7.57□□□□□ -1.2
RIF1-209ENST00000467762 VPS9D1Q9Y2B5 631 aa7.57□□□□□ -1.2
RIF1-209ENST00000467762 ABCA10Q8WWZ4 1543 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms