RNA–Protein interactions for RNA: ENST00000467507.1

PRKACB-215, Transcript of protein kinase cAMP-activated catalytic subunit beta, human

TSL 5

Gene PRKACB, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKACB-215	ENST00000467507	PHF14	O94880	888 aa		11.64	□□□□□ -0.55
PRKACB-215	ENST00000467507	LAPTM4B	Q86VI4	370 aa		11.64	□□□□□ -0.55
PRKACB-215	ENST00000467507	PROX2	Q3B8N5	592 aa		11.62	□□□□□ -0.55
PRKACB-215	ENST00000467507	NYAP1	Q6ZVC0	841 aa		11.62	□□□□□ -0.55
PRKACB-215	ENST00000467507	EPAS1	Q99814	870 aa		11.6	□□□□□ -0.55
PRKACB-215	ENST00000467507	ITGBL1	O95965	494 aa	Predicted RBP	11.59	□□□□□ -0.55
PRKACB-215	ENST00000467507	COL9A1	P20849	921 aa		11.59	□□□□□ -0.55
PRKACB-215	ENST00000467507	SOWAHB	A6NEL2	793 aa		11.57	□□□□□ -0.56
PRKACB-215	ENST00000467507	ONECUT3	O60422	494 aa	Predicted RBP	11.57	□□□□□ -0.56
PRKACB-215	ENST00000467507	BCAM	P50895	628 aa		11.57	□□□□□ -0.56
PRKACB-215	ENST00000467507	ZFR	Q96KR1	1074 aa	Known RBP	11.55	□□□□□ -0.56
PRKACB-215	ENST00000467507	KIAA1468	Q9P260	1216 aa		11.55	□□□□□ -0.56
PRKACB-215	ENST00000467507	C6orf132	Q5T0Z8	1188 aa		11.53	□□□□□ -0.56
PRKACB-215	ENST00000467507	CADPS2	Q86UW7	1296 aa		11.52	□□□□□ -0.57
PRKACB-215	ENST00000467507	DPYSL4	O14531	572 aa		11.51	□□□□□ -0.57
PRKACB-215	ENST00000467507	CAMK2B	Q13554	666 aa		11.51	□□□□□ -0.57
PRKACB-215	ENST00000467507	FAM98C	Q17RN3	349 aa	Known RBP	11.51	□□□□□ -0.57
PRKACB-215	ENST00000467507	TRIM6-TRIM34	B2RNG4	842 aa		11.5	□□□□□ -0.57
PRKACB-215	ENST00000467507	KCNC4	Q03721	635 aa		11.5	□□□□□ -0.57
PRKACB-215	ENST00000467507	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.5	□□□□□ -0.57
PRKACB-215	ENST00000467507	LRCH3	Q96II8	777 aa		11.49	□□□□□ -0.57
PRKACB-215	ENST00000467507	RBM33	Q96EV2	1170 aa	Known RBP	11.48	□□□□□ -0.57
PRKACB-215	ENST00000467507	WBP1L	Q9NX94	342 aa		11.48	□□□□□ -0.57
PRKACB-215	ENST00000467507	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.48	□□□□□ -0.57
PRKACB-215	ENST00000467507	TSR3	Q9UJK0	312 aa	Known RBP	11.46	□□□□□ -0.57
PRKACB-215	ENST00000467507	DDX12P	Q92771	950 aa		11.45	□□□□□ -0.58
PRKACB-215	ENST00000467507	HPS5	Q9UPZ3	1129 aa		11.45	□□□□□ -0.58
PRKACB-215	ENST00000467507	PACS2	Q86VP3	889 aa		11.44	□□□□□ -0.58
PRKACB-215	ENST00000467507	NBR1	Q14596	966 aa		11.43	□□□□□ -0.58
PRKACB-215	ENST00000467507	MAP3K7	O43318	606 aa		11.42	□□□□□ -0.58
PRKACB-215	ENST00000467507	EN1	Q05925	392 aa	Predicted RBP	11.41	□□□□□ -0.58
PRKACB-215	ENST00000467507		Q6ZNB5	142 aa		11.41	□□□□□ -0.58
PRKACB-215	ENST00000467507	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.38	□□□□□ -0.59
PRKACB-215	ENST00000467507	PDIA6	Q15084	440 aa		11.38	□□□□□ -0.59
PRKACB-215	ENST00000467507	PPP4C	P60510	307 aa		11.37	□□□□□ -0.59
PRKACB-215	ENST00000467507	LAPTM4A	Q15012	233 aa		11.37	□□□□□ -0.59
PRKACB-215	ENST00000467507	CERK	Q8TCT0	537 aa		11.35	□□□□□ -0.59
PRKACB-215	ENST00000467507	TSKS	Q9UJT2	592 aa		11.35	□□□□□ -0.59
PRKACB-215	ENST00000467507	TSR1	Q2NL82	804 aa	Known RBP	11.34	□□□□□ -0.59
PRKACB-215	ENST00000467507	BBX	Q8WY36	941 aa	Predicted RBP	11.34	□□□□□ -0.59
PRKACB-215	ENST00000467507	NBPF26	B4DH59	902 aa		11.32	□□□□□ -0.6
PRKACB-215	ENST00000467507	CDCA7L	Q96GN5	454 aa		11.31	□□□□□ -0.6
PRKACB-215	ENST00000467507	PRSS12	P56730	875 aa		11.3	□□□□□ -0.6
PRKACB-215	ENST00000467507	HDGF	P51858	240 aa	Known RBP	11.29	□□□□□ -0.6
PRKACB-215	ENST00000467507	SAMD7	Q7Z3H4	446 aa		11.29	□□□□□ -0.6
PRKACB-215	ENST00000467507	NECTIN2	Q92692	538 aa		11.27	□□□□□ -0.61
PRKACB-215	ENST00000467507	E2F4	Q16254	413 aa		11.26	□□□□□ -0.61
PRKACB-215	ENST00000467507	IL21	Q9HBE4	155 aa		11.26	□□□□□ -0.61
PRKACB-215	ENST00000467507	WDR70	Q9NW82	654 aa		11.26	□□□□□ -0.61
PRKACB-215	ENST00000467507	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.26	□□□□□ -0.61
PRKACB-215	ENST00000467507	SMAP	O00193	183 aa		11.25	□□□□□ -0.61
PRKACB-215	ENST00000467507	RNF40	O75150	1001 aa		11.25	□□□□□ -0.61
PRKACB-215	ENST00000467507	SPRYD3	Q8NCJ5	442 aa		11.25	□□□□□ -0.61
PRKACB-215	ENST00000467507	PNMA3	Q9UL41	463 aa		11.25	□□□□□ -0.61
PRKACB-215	ENST00000467507	GRXCR2	A6NFK2	248 aa		11.24	□□□□□ -0.61
PRKACB-215	ENST00000467507	TJAP1	Q5JTD0	557 aa		11.24	□□□□□ -0.61
PRKACB-215	ENST00000467507	TATDN2	Q93075	761 aa		11.24	□□□□□ -0.61
PRKACB-215	ENST00000467507	GFRA3	O60609	400 aa		11.23	□□□□□ -0.61
PRKACB-215	ENST00000467507	MTR	Q99707	1265 aa		11.23	□□□□□ -0.61
PRKACB-215	ENST00000467507	RBM27	Q9P2N5	1060 aa	Known RBP	11.23	□□□□□ -0.61
PRKACB-215	ENST00000467507	SLC4A3	P48751	1232 aa		11.21	□□□□□ -0.61
PRKACB-215	ENST00000467507	PRKD2	Q9BZL6	878 aa		11.21	□□□□□ -0.61
PRKACB-215	ENST00000467507	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.21	□□□□□ -0.61
PRKACB-215	ENST00000467507		V9GY48	417 aa	Predicted RBP	11.19	□□□□□ -0.62
PRKACB-215	ENST00000467507	FAM198A	Q9UFP1	575 aa		11.18	□□□□□ -0.62
PRKACB-215	ENST00000467507	NRG2	O14511	850 aa	Predicted RBP	11.17	□□□□□ -0.62
PRKACB-215	ENST00000467507	GGCX	P38435	758 aa		11.17	□□□□□ -0.62
PRKACB-215	ENST00000467507	PPP1R18	Q6NYC8	613 aa		11.17	□□□□□ -0.62
PRKACB-215	ENST00000467507	TRAF7	Q6Q0C0	670 aa		11.17	□□□□□ -0.62
PRKACB-215	ENST00000467507	NUDT18	Q6ZVK8	323 aa		11.17	□□□□□ -0.62
PRKACB-215	ENST00000467507	SLF2	Q8IX21	1173 aa		11.15	□□□□□ -0.62
PRKACB-215	ENST00000467507	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.15	□□□□□ -0.62
PRKACB-215	ENST00000467507	CDHR5	Q9HBB8	845 aa		11.14	□□□□□ -0.63
PRKACB-215	ENST00000467507	OSBP	P22059	807 aa		11.13	□□□□□ -0.63
PRKACB-215	ENST00000467507	PRIM1	P49642	420 aa	Known RBP	11.13	□□□□□ -0.63
PRKACB-215	ENST00000467507	APLP1	P51693	650 aa		11.12	□□□□□ -0.63
PRKACB-215	ENST00000467507	PRR14	Q9BWN1	585 aa		11.12	□□□□□ -0.63
PRKACB-215	ENST00000467507	C3orf80	F5H4A9	247 aa		11.11	□□□□□ -0.63
PRKACB-215	ENST00000467507	ZNF516	Q92618	1163 aa		11.1	□□□□□ -0.63
PRKACB-215	ENST00000467507	SWT1	Q5T5J6	900 aa	Known RBP	11.08	□□□□□ -0.64
PRKACB-215	ENST00000467507	PADI6	Q6TGC4	694 aa		11.08	□□□□□ -0.64
PRKACB-215	ENST00000467507	CFAP44	Q96MT7	982 aa		11.08	□□□□□ -0.64
PRKACB-215	ENST00000467507	COPS2	P61201	443 aa		11.07	□□□□□ -0.64
PRKACB-215	ENST00000467507	PDZRN3	Q9UPQ7	1066 aa		11.07	□□□□□ -0.64
PRKACB-215	ENST00000467507	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.06	□□□□□ -0.64
PRKACB-215	ENST00000467507	TMUB1	Q9BVT8	246 aa		11.06	□□□□□ -0.64
PRKACB-215	ENST00000467507	TTC13	Q8NBP0	860 aa		11.05	□□□□□ -0.64
PRKACB-215	ENST00000467507	LCE2B	O14633	110 aa		11.04	□□□□□ -0.64
PRKACB-215	ENST00000467507	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.03	□□□□□ -0.64
PRKACB-215	ENST00000467507	NKX2-3	Q8TAU0	364 aa		11.03	□□□□□ -0.64
PRKACB-215	ENST00000467507	ZPR1	O75312	459 aa		11.02	□□□□□ -0.65
PRKACB-215	ENST00000467507	PCDHB3	Q9Y5E6	796 aa		11.02	□□□□□ -0.65
PRKACB-215	ENST00000467507	NPDC1	Q9NQX5	325 aa	Predicted RBP	11	□□□□□ -0.65
PRKACB-215	ENST00000467507	RTN4	Q9NQC3	1192 aa	Known RBP	10.99	□□□□□ -0.65
PRKACB-215	ENST00000467507	EYA1	Q99502	592 aa		10.98	□□□□□ -0.65
PRKACB-215	ENST00000467507	DNAJB2	P25686	324 aa		10.97	□□□□□ -0.65
PRKACB-215	ENST00000467507	ZNF787	Q6DD87	383 aa		10.97	□□□□□ -0.65
PRKACB-215	ENST00000467507	KMT5B	Q4FZB7	885 aa		10.95	□□□□□ -0.66
PRKACB-215	ENST00000467507	RBM46	Q8TBY0	533 aa	Known RBP	10.95	□□□□□ -0.66
PRKACB-215	ENST00000467507	SLC19A1	P41440	591 aa		10.93	□□□□□ -0.66

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms