RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 RBM33Q96EV2 1170 aaKnown RBP9.52□□□□□ -0.89
SMC4-208ENST00000467468 AXIN2Q9Y2T1 843 aa9.51□□□□□ -0.89
SMC4-208ENST00000467468 TESPA1A2RU30 521 aaPredicted RBP9.5□□□□□ -0.89
SMC4-208ENST00000467468 PPP1R3GB7ZBB8 358 aa9.5□□□□□ -0.89
SMC4-208ENST00000467468 MLLT3P42568 568 aaPredicted RBP9.5□□□□□ -0.89
SMC4-208ENST00000467468 OSBPP22059 807 aa9.49□□□□□ -0.89
SMC4-208ENST00000467468 PSEN2P49810 448 aa9.49□□□□□ -0.89
SMC4-208ENST00000467468 C6orf132Q5T0Z8 1188 aa9.49□□□□□ -0.89
SMC4-208ENST00000467468 POTEEQ6S8J3 1075 aa9.49□□□□□ -0.89
SMC4-208ENST00000467468 TK2O00142 265 aa9.48□□□□□ -0.89
SMC4-208ENST00000467468 ANKRD13DQ6ZTN6 518 aa9.48□□□□□ -0.89
SMC4-208ENST00000467468 CERKQ8TCT0 537 aa9.47□□□□□ -0.89
SMC4-208ENST00000467468 SLC4A5Q9BY07 1137 aa9.46□□□□□ -0.9
SMC4-208ENST00000467468 DMRTA1Q5VZB9 504 aa9.45□□□□□ -0.9
SMC4-208ENST00000467468 TSR1Q2NL82 804 aaKnown RBP9.44□□□□□ -0.9
SMC4-208ENST00000467468 ADGRD1Q6QNK2 874 aa9.44□□□□□ -0.9
SMC4-208ENST00000467468 STAC3Q96MF2 364 aa9.43□□□□□ -0.9
SMC4-208ENST00000467468 ZBED2Q9BTP6 218 aa9.43□□□□□ -0.9
SMC4-208ENST00000467468 NUTM2FA1L443 756 aa9.41□□□□□ -0.9
SMC4-208ENST00000467468 COL9A1P20849 921 aa9.41□□□□□ -0.9
SMC4-208ENST00000467468 PRIM1P49642 420 aaKnown RBP9.41□□□□□ -0.9
SMC4-208ENST00000467468 VPS9D1Q9Y2B5 631 aa9.41□□□□□ -0.9
SMC4-208ENST00000467468 ONECUT3O60422 494 aaPredicted RBP9.39□□□□□ -0.91
SMC4-208ENST00000467468 NBPF3Q9H094 633 aa9.39□□□□□ -0.91
SMC4-208ENST00000467468 CDHR5Q9HBB8 845 aa9.39□□□□□ -0.91
SMC4-208ENST00000467468 RBM27Q9P2N5 1060 aaKnown RBP9.39□□□□□ -0.91
SMC4-208ENST00000467468 SPNS2Q8IVW8 549 aa9.38□□□□□ -0.91
SMC4-208ENST00000467468 TRIM6-TRIM34B2RNG4 842 aa9.37□□□□□ -0.91
SMC4-208ENST00000467468 FCHSD2O94868 740 aa9.37□□□□□ -0.91
SMC4-208ENST00000467468 BCANQ96GW7 911 aa9.37□□□□□ -0.91
SMC4-208ENST00000467468 RABGEF1Q9UJ41 708 aa9.37□□□□□ -0.91
SMC4-208ENST00000467468 PRSS12P56730 875 aa9.36□□□□□ -0.91
SMC4-208ENST00000467468 PROX2Q3B8N5 592 aa9.36□□□□□ -0.91
SMC4-208ENST00000467468 RBM26Q5T8P6 1007 aaKnown RBP9.36□□□□□ -0.91
SMC4-208ENST00000467468 PACS2Q86VP3 889 aa9.36□□□□□ -0.91
SMC4-208ENST00000467468 CDCA7LQ96GN5 454 aa9.36□□□□□ -0.91
SMC4-208ENST00000467468 HRO43593 1189 aa9.35□□□□□ -0.91
SMC4-208ENST00000467468 PTGDRQ13258 359 aa9.35□□□□□ -0.91
SMC4-208ENST00000467468 GPIHBP1Q8IV16 184 aa9.35□□□□□ -0.91
SMC4-208ENST00000467468 PLSCR2Q9NRY7 297 aa9.35□□□□□ -0.91
SMC4-208ENST00000467468 MYT1LQ9UL68 1186 aa9.35□□□□□ -0.91
SMC4-208ENST00000467468 MRPL50Q8N5N7 158 aaKnown RBP9.34□□□□□ -0.91
SMC4-208ENST00000467468 NBPF26B4DH59 902 aa9.33□□□□□ -0.92
SMC4-208ENST00000467468 NPDC1Q9NQX5 325 aaPredicted RBP9.33□□□□□ -0.92
SMC4-208ENST00000467468 GOLGA8CPA6NN73 597 aa9.32□□□□□ -0.92
SMC4-208ENST00000467468 HIC1Q14526 733 aa9.32□□□□□ -0.92
SMC4-208ENST00000467468 KIAA1468Q9P260 1216 aa9.32□□□□□ -0.92
SMC4-208ENST00000467468 BHMG1C9JSJ3 638 aaPredicted RBP9.31□□□□□ -0.92
SMC4-208ENST00000467468 LMOD2Q6P5Q4 547 aa9.31□□□□□ -0.92
SMC4-208ENST00000467468 LAPTM4BQ86VI4 370 aa9.31□□□□□ -0.92
SMC4-208ENST00000467468 MMRN1Q13201 1228 aa9.3□□□□□ -0.92
SMC4-208ENST00000467468 PADI6Q6TGC4 694 aa9.3□□□□□ -0.92
SMC4-208ENST00000467468 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.3□□□□□ -0.921e-6■■■■■ 406.9
SMC4-208ENST00000467468 RNF166Q96A37 237 aaPredicted RBP9.3□□□□□ -0.92
SMC4-208ENST00000467468 TSKSQ9UJT2 592 aa9.3□□□□□ -0.92
SMC4-208ENST00000467468 TTC13Q8NBP0 860 aa9.28□□□□□ -0.92
SMC4-208ENST00000467468 GNPATO15228 680 aa9.27□□□□□ -0.93
SMC4-208ENST00000467468 FAM98CQ17RN3 349 aaKnown RBP9.27□□□□□ -0.93
SMC4-208ENST00000467468 PNMA3Q9UL41 463 aa9.27□□□□□ -0.93
SMC4-208ENST00000467468 TATDN2Q93075 761 aa9.26□□□□□ -0.93
SMC4-208ENST00000467468 SEPT9Q9UHD8 586 aaPredicted RBP9.26□□□□□ -0.93
SMC4-208ENST00000467468 GPR37O15354 613 aa9.25□□□□□ -0.93
SMC4-208ENST00000467468 ANKK1Q8NFD2 765 aa9.25□□□□□ -0.93
SMC4-208ENST00000467468 NUDT18Q6ZVK8 323 aa9.24□□□□□ -0.93
SMC4-208ENST00000467468 RBM46Q8TBY0 533 aaKnown RBP9.24□□□□□ -0.93
SMC4-208ENST00000467468 WNT2BQ93097 391 aa9.24□□□□□ -0.93
SMC4-208ENST00000467468 FAM198AQ9UFP1 575 aa9.24□□□□□ -0.93
SMC4-208ENST00000467468 KCTD12Q96CX2 325 aaKnown RBP9.23□□□□□ -0.93
SMC4-208ENST00000467468 HDGFP51858 240 aaKnown RBP9.22□□□□□ -0.93
SMC4-208ENST00000467468 ZFRQ96KR1 1074 aaKnown RBP9.22□□□□□ -0.93
SMC4-208ENST00000467468 SMAPO00193 183 aa9.21□□□□□ -0.94
SMC4-208ENST00000467468 OATP04181 439 aa9.21□□□□□ -0.94
SMC4-208ENST00000467468 ADGRG1Q9Y653 693 aa9.21□□□□□ -0.94
SMC4-208ENST00000467468 SLC4A3P48751 1232 aa9.2□□□□□ -0.94
SMC4-208ENST00000467468 LRCH3Q96II8 777 aa9.19□□□□□ -0.94
SMC4-208ENST00000467468 DNAJB2P25686 324 aa9.18□□□□□ -0.94
SMC4-208ENST00000467468 MAP2K5Q13163 448 aa9.18□□□□□ -0.94
SMC4-208ENST00000467468 THSD4Q6ZMP0 1018 aa9.18□□□□□ -0.94
SMC4-208ENST00000467468 HCSTQ9UBK5 93 aa9.18□□□□□ -0.94
SMC4-208ENST00000467468 C3orf80F5H4A9 247 aa9.17□□□□□ -0.94
SMC4-208ENST00000467468 FECHP22830 423 aa9.17□□□□□ -0.94
SMC4-208ENST00000467468 EYA1Q99502 592 aa9.17□□□□□ -0.94
SMC4-208ENST00000467468 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.17□□□□□ -0.94
SMC4-208ENST00000467468 MINK1Q8N4C8 1332 aaPredicted RBP9.16□□□□□ -0.94
SMC4-208ENST00000467468 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.16□□□□□ -0.94
SMC4-208ENST00000467468 SOWAHBA6NEL2 793 aa9.16□□□□□ -0.94
SMC4-208ENST00000467468 ZC3H15Q8WU90 426 aaKnown RBP9.16□□□□□ -0.94
SMC4-208ENST00000467468 NECTIN2Q92692 538 aa9.16□□□□□ -0.94
SMC4-208ENST00000467468 SAMD7Q7Z3H4 446 aa9.15□□□□□ -0.94
SMC4-208ENST00000467468 PXYLP1Q8TE99 480 aa9.15□□□□□ -0.94
SMC4-208ENST00000467468 FAM161AQ3B820 660 aa9.14□□□□□ -0.95
SMC4-208ENST00000467468 METTL3Q86U44 580 aaKnown RBP9.14□□□□□ -0.95
SMC4-208ENST00000467468 SLF2Q8IX21 1173 aa9.14□□□□□ -0.95
SMC4-208ENST00000467468 KRI1Q8N9T8 703 aaKnown RBP9.14□□□□□ -0.95
SMC4-208ENST00000467468 RCCD1A6NED2 376 aa9.13□□□□□ -0.95
SMC4-208ENST00000467468 RNF40O75150 1001 aa9.13□□□□□ -0.95
SMC4-208ENST00000467468 ZMYND10O75800 440 aa9.13□□□□□ -0.95
SMC4-208ENST00000467468 BCAMP50895 628 aa9.13□□□□□ -0.95
SMC4-208ENST00000467468 PTPN5P54829 565 aa9.13□□□□□ -0.95
SMC4-208ENST00000467468 NYAP1Q6ZVC0 841 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms