RNA–Protein interactions for RNA: ENST00000467465.1

HLA-DOA-203, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-203ENST00000467465 GGT6Q6P531 493 aa15□□□□□ -0.01
HLA-DOA-203ENST00000467465 NPATQ14207 1427 aa14.99□□□□□ -0.01
HLA-DOA-203ENST00000467465 UHRF1BP1Q6BDS2 1440 aa14.99□□□□□ -0.01
HLA-DOA-203ENST00000467465 DUOX2Q9NRD8 1548 aa14.97□□□□□ -0.01
HLA-DOA-203ENST00000467465 RNF17Q9BXT8 1623 aaKnown RBP14.97□□□□□ -0.01
HLA-DOA-203ENST00000467465 KIF3BO15066 747 aa14.97□□□□□ -0.01
HLA-DOA-203ENST00000467465 DAPK1P53355 1430 aa14.97□□□□□ -0.01
HLA-DOA-203ENST00000467465 ZMYM3Q14202 1370 aa14.97□□□□□ -0.01
HLA-DOA-203ENST00000467465 KDM5DQ9BY66 1539 aa14.97□□□□□ -0.01
HLA-DOA-203ENST00000467465 ABCC5O15440 1437 aa14.96□□□□□ -0.01
HLA-DOA-203ENST00000467465 ZC3H13Q5T200 1668 aaKnown RBP14.95□□□□□ -0.02
HLA-DOA-203ENST00000467465 KIF15Q9NS87 1388 aa14.93□□□□□ -0.02
HLA-DOA-203ENST00000467465 ERBINQ96RT1 1412 aa14.92□□□□□ -0.02
HLA-DOA-203ENST00000467465 PTPRTO14522 1441 aa14.92□□□□□ -0.02
HLA-DOA-203ENST00000467465 ZNF142P52746 1687 aaPredicted RBP14.91□□□□□ -0.02
HLA-DOA-203ENST00000467465 ANKRD30AQ9BXX3 1397 aa14.91□□□□□ -0.02
HLA-DOA-203ENST00000467465 MYO3AQ8NEV4 1616 aa14.91□□□□□ -0.02
HLA-DOA-203ENST00000467465 PTPRKQ15262 1439 aa14.91□□□□□ -0.02
HLA-DOA-203ENST00000467465 WASHC2CQ9Y4E1 1318 aa14.91□□□□□ -0.02
HLA-DOA-203ENST00000467465 PZPP20742 1482 aa14.89□□□□□ -0.03
HLA-DOA-203ENST00000467465 FAM50AQ14320 339 aaKnown RBP14.89□□□□□ -0.03
HLA-DOA-203ENST00000467465 ADGRL2O95490 1459 aa14.89□□□□□ -0.03
HLA-DOA-203ENST00000467465 MROH1Q8NDA8 1641 aa14.88□□□□□ -0.03
HLA-DOA-203ENST00000467465 DEPDC5O75140 1603 aa14.88□□□□□ -0.03
HLA-DOA-203ENST00000467465 STRCQ7RTU9 1775 aa14.88□□□□□ -0.03
HLA-DOA-203ENST00000467465 ABCC3O15438 1527 aa14.87□□□□□ -0.03
HLA-DOA-203ENST00000467465 PRDM15P57071 1507 aaPredicted RBP14.87□□□□□ -0.03
HLA-DOA-203ENST00000467465 CEP152O94986 1710 aa14.87□□□□□ -0.03
HLA-DOA-203ENST00000467465 RRP7BPQ9NSQ0 103 aa14.87□□□□□ -0.03
HLA-DOA-203ENST00000467465 CEP170BQ9Y4F5 1589 aaPredicted RBP14.86□□□□□ -0.03
HLA-DOA-203ENST00000467465 NCOA1Q15788 1441 aa14.86□□□□□ -0.03
HLA-DOA-203ENST00000467465 CAMSAP1Q5T5Y3 1602 aa14.85□□□□□ -0.03
HLA-DOA-203ENST00000467465 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.85□□□□□ -0.03
HLA-DOA-203ENST00000467465 CHIC2Q9UKJ5 165 aa14.84□□□□□ -0.03
HLA-DOA-203ENST00000467465 TNRQ92752 1358 aa14.84□□□□□ -0.03
HLA-DOA-203ENST00000467465 A2ML1A8K2U0 1454 aa14.83□□□□□ -0.03
HLA-DOA-203ENST00000467465 UBAP1LF5GYI3 381 aa14.83□□□□□ -0.04
HLA-DOA-203ENST00000467465 KANK1Q14678 1352 aa14.83□□□□□ -0.04
HLA-DOA-203ENST00000467465 SPATA31D1Q6ZQQ2 1576 aa14.82□□□□□ -0.04
HLA-DOA-203ENST00000467465 CFAP65Q6ZU64 1925 aaKnown RBP14.82□□□□□ -0.04
HLA-DOA-203ENST00000467465 PLA2R1Q13018 1463 aa14.82□□□□□ -0.04
HLA-DOA-203ENST00000467465 NCKAP5LQ9HCH0 1330 aa14.81□□□□□ -0.04
HLA-DOA-203ENST00000467465 NLRP1Q9C000 1473 aa14.81□□□□□ -0.04
HLA-DOA-203ENST00000467465 ROCK1Q13464 1354 aa14.8□□□□□ -0.04
HLA-DOA-203ENST00000467465 IQSEC2Q5JU85 1478 aa14.8□□□□□ -0.04
HLA-DOA-203ENST00000467465 LTBP4Q8N2S1 1624 aa14.8□□□□□ -0.04
HLA-DOA-203ENST00000467465 ARHGAP31Q2M1Z3 1444 aa14.79□□□□□ -0.04
HLA-DOA-203ENST00000467465 VWDEQ8N2E2 1590 aa14.79□□□□□ -0.04
HLA-DOA-203ENST00000467465 ANKRD50Q9ULJ7 1429 aa14.79□□□□□ -0.04
HLA-DOA-203ENST00000467465 LMTK2Q8IWU2 1503 aa14.78□□□□□ -0.04
HLA-DOA-203ENST00000467465 ERVK-7P63135 1459 aa14.78□□□□□ -0.04
HLA-DOA-203ENST00000467465 FBXO31Q5XUX0 539 aaPredicted RBP14.78□□□□□ -0.04
HLA-DOA-203ENST00000467465 PPARGC1BQ86YN6 1023 aaKnown RBP14.78□□□□□ -0.04
HLA-DOA-203ENST00000467465 POLR1AO95602 1720 aaPredicted RBP14.78□□□□□ -0.04
HLA-DOA-203ENST00000467465 ZNF335Q9H4Z2 1342 aaPredicted RBP14.77□□□□□ -0.04
HLA-DOA-203ENST00000467465 RRBP1Q9P2E9 1410 aaKnown RBP14.76□□□□□ -0.05
HLA-DOA-203ENST00000467465 PKD2Q13563 968 aa14.76□□□□□ -0.05
HLA-DOA-203ENST00000467465 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.76□□□□□ -0.05
HLA-DOA-203ENST00000467465 UNC13BO14795 1591 aa14.75□□□□□ -0.05
HLA-DOA-203ENST00000467465 UGGT1Q9NYU2 1555 aa14.75□□□□□ -0.05
HLA-DOA-203ENST00000467465 EFCAB6Q5THR3 1501 aa14.74□□□□□ -0.05
HLA-DOA-203ENST00000467465 THEMISQ8N1K5 641 aaPredicted RBP14.73□□□□□ -0.05
HLA-DOA-203ENST00000467465 TET3O43151 1660 aa14.73□□□□□ -0.05
HLA-DOA-203ENST00000467465 GCC2Q8IWJ2 1684 aa14.73□□□□□ -0.05
HLA-DOA-203ENST00000467465 RPRD2Q5VT52 1461 aaKnown RBP14.71□□□□□ -0.05
HLA-DOA-203ENST00000467465 ITGAEP38570 1179 aa14.71□□□□□ -0.05
HLA-DOA-203ENST00000467465 UBR1Q8IWV7 1749 aa14.71□□□□□ -0.05
HLA-DOA-203ENST00000467465 KDM5AP29375 1690 aaKnown RBP14.71□□□□□ -0.06
HLA-DOA-203ENST00000467465 SCAF1Q9H7N4 1312 aaKnown RBP14.7□□□□□ -0.06
HLA-DOA-203ENST00000467465 IQGAP3Q86VI3 1631 aa14.7□□□□□ -0.06
HLA-DOA-203ENST00000467465 TOM1O60784 492 aa14.69□□□□□ -0.06
HLA-DOA-203ENST00000467465 PIP4K2BP78356 416 aa14.69□□□□□ -0.06
HLA-DOA-203ENST00000467465 HSPA1LP34931 641 aa14.68□□□□□ -0.06
HLA-DOA-203ENST00000467465 NEURL4Q96JN8 1562 aa14.68□□□□□ -0.06
HLA-DOA-203ENST00000467465 ANKLE2Q86XL3 938 aa14.67□□□□□ -0.06
HLA-DOA-203ENST00000467465 PIK3C2BO00750 1634 aa14.66□□□□□ -0.06
HLA-DOA-203ENST00000467465 NOS1P29475 1434 aa14.66□□□□□ -0.06
HLA-DOA-203ENST00000467465 SYNMO15061 1565 aa14.65□□□□□ -0.06
HLA-DOA-203ENST00000467465 MED14O60244 1454 aa14.65□□□□□ -0.06
HLA-DOA-203ENST00000467465 IQGAP1P46940 1657 aa14.65□□□□□ -0.06
HLA-DOA-203ENST00000467465 E9PCH4 1651 aa14.64□□□□□ -0.07
HLA-DOA-203ENST00000467465 SLIT1O75093 1534 aa14.63□□□□□ -0.07
HLA-DOA-203ENST00000467465 ARHGAP23Q9P227 1491 aa14.63□□□□□ -0.07
HLA-DOA-203ENST00000467465 NUP155O75694 1391 aa14.62□□□□□ -0.07
HLA-DOA-203ENST00000467465 NPHP4O75161 1426 aaPredicted RBP14.62□□□□□ -0.07
HLA-DOA-203ENST00000467465 PHF23Q9BUL5 403 aaPredicted RBP14.62□□□□□ -0.07
HLA-DOA-203ENST00000467465 SLC52A1Q9NWF4 448 aa14.62□□□□□ -0.07
HLA-DOA-203ENST00000467465 ADGRB3O60242 1522 aa14.61□□□□□ -0.07
HLA-DOA-203ENST00000467465 NAIPQ13075 1403 aa14.61□□□□□ -0.07
HLA-DOA-203ENST00000467465 STAG3Q9UJ98 1225 aa14.61□□□□□ -0.07
HLA-DOA-203ENST00000467465 SCAF11Q99590 1463 aaKnown RBP14.61□□□□□ -0.07
HLA-DOA-203ENST00000467465 HFM1A2PYH4 1435 aa14.6□□□□□ -0.07
HLA-DOA-203ENST00000467465 IDI1Q13907 227 aa14.59□□□□□ -0.07
HLA-DOA-203ENST00000467465 EID1Q9Y6B2 187 aa14.59□□□□□ -0.07
HLA-DOA-203ENST00000467465 MYO5BQ9ULV0 1848 aa14.58□□□□□ -0.08
HLA-DOA-203ENST00000467465 TMEM2Q9UHN6 1383 aa14.58□□□□□ -0.08
HLA-DOA-203ENST00000467465 SPHKAPQ2M3C7 1700 aa14.58□□□□□ -0.08
HLA-DOA-203ENST00000467465 CPS1P31327 1500 aa14.57□□□□□ -0.08
HLA-DOA-203ENST00000467465 TMEM131LA2VDJ0 1609 aa14.55□□□□□ -0.08
HLA-DOA-203ENST00000467465 TXNDC2Q86VQ3 553 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms