RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 SPDYE16A6NNV3 312 aaPredicted RBP9.55□□□□□ -0.88
VPS50-209ENST00000467326 VPS9D1Q9Y2B5 631 aa9.55□□□□□ -0.88
VPS50-209ENST00000467326 IRX2Q9BZI1 471 aaPredicted RBP9.54□□□□□ -0.88
VPS50-209ENST00000467326 BCL2L12Q9HB09 334 aa9.53□□□□□ -0.88
VPS50-209ENST00000467326 ANO8Q9HCE9 1232 aaPredicted RBP9.53□□□□□ -0.88
VPS50-209ENST00000467326 PTPREP23469 700 aa9.52□□□□□ -0.89
VPS50-209ENST00000467326 JPH4Q96JJ6 628 aa9.52□□□□□ -0.89
VPS50-209ENST00000467326 ZNF454Q8N9F8 522 aa9.51□□□□□ -0.89
VPS50-209ENST00000467326 FOSBP53539 338 aa9.5□□□□□ -0.89
VPS50-209ENST00000467326 MRPL50Q8N5N7 158 aaKnown RBP9.5□□□□□ -0.89
VPS50-209ENST00000467326 NBPF3Q9H094 633 aa9.5□□□□□ -0.89
VPS50-209ENST00000467326 THSD4Q6ZMP0 1018 aa9.49□□□□□ -0.89
VPS50-209ENST00000467326 DDX12PQ92771 950 aa9.48□□□□□ -0.89
VPS50-209ENST00000467326 WNT2BQ93097 391 aa9.48□□□□□ -0.89
VPS50-209ENST00000467326 A0A0G2JS52 829 aa9.47□□□□□ -0.89
VPS50-209ENST00000467326 BHMG1C9JSJ3 638 aaPredicted RBP9.46□□□□□ -0.9
VPS50-209ENST00000467326 PHF14O94880 888 aa9.46□□□□□ -0.9
VPS50-209ENST00000467326 PCDHGA10Q9Y5H3 936 aa9.46□□□□□ -0.9
VPS50-209ENST00000467326 NBR1Q14596 966 aa9.45□□□□□ -0.9
VPS50-209ENST00000467326 TYW1BQ6NUM6 668 aa9.45□□□□□ -0.9
VPS50-209ENST00000467326 FBXW7Q969H0 707 aa9.45□□□□□ -0.9
VPS50-209ENST00000467326 ZDHHC16Q969W1 377 aa9.45□□□□□ -0.9
VPS50-209ENST00000467326 GRXCR2A6NFK2 248 aa9.44□□□□□ -0.9
VPS50-209ENST00000467326 EPAS1Q99814 870 aa9.44□□□□□ -0.9
VPS50-209ENST00000467326 SEMA3EO15041 775 aa9.42□□□□□ -0.9
VPS50-209ENST00000467326 ZBED2Q9BTP6 218 aa9.42□□□□□ -0.9
VPS50-209ENST00000467326 ADAM33Q9BZ11 813 aa9.42□□□□□ -0.9
VPS50-209ENST00000467326 MLLT3P42568 568 aaPredicted RBP9.41□□□□□ -0.9
VPS50-209ENST00000467326 EN1Q05925 392 aaPredicted RBP9.4□□□□□ -0.9
VPS50-209ENST00000467326 NYAP1Q6ZVC0 841 aa9.39□□□□□ -0.91
VPS50-209ENST00000467326 RBM33Q96EV2 1170 aaKnown RBP9.39□□□□□ -0.91
VPS50-209ENST00000467326 TESPA1A2RU30 521 aaPredicted RBP9.38□□□□□ -0.91
VPS50-209ENST00000467326 MAP3K7O43318 606 aa9.38□□□□□ -0.91
VPS50-209ENST00000467326 ANKK1Q8NFD2 765 aa9.38□□□□□ -0.91
VPS50-209ENST00000467326 OSBPP22059 807 aa9.37□□□□□ -0.91
VPS50-209ENST00000467326 PRIM1P49642 420 aaKnown RBP9.36□□□□□ -0.91
VPS50-209ENST00000467326 RABGEF1Q9UJ41 708 aa9.35□□□□□ -0.91
VPS50-209ENST00000467326 PPP1R3GB7ZBB8 358 aa9.34□□□□□ -0.91
VPS50-209ENST00000467326 ITGBL1O95965 494 aaPredicted RBP9.34□□□□□ -0.91
VPS50-209ENST00000467326 TSR1Q2NL82 804 aaKnown RBP9.34□□□□□ -0.91
VPS50-209ENST00000467326 C6orf132Q5T0Z8 1188 aa9.34□□□□□ -0.91
VPS50-209ENST00000467326 SMYD5Q6GMV2 418 aa9.33□□□□□ -0.92
VPS50-209ENST00000467326 LAPTM4BQ86VI4 370 aa9.33□□□□□ -0.92
VPS50-209ENST00000467326 LAPTM4AQ15012 233 aa9.31□□□□□ -0.92
VPS50-209ENST00000467326 Q6ZNB5 142 aa9.31□□□□□ -0.92
VPS50-209ENST00000467326 CDHR5Q9HBB8 845 aa9.31□□□□□ -0.92
VPS50-209ENST00000467326 TULP1O00294 542 aaPredicted RBP9.3□□□□□ -0.92
VPS50-209ENST00000467326 COL9A1P20849 921 aa9.3□□□□□ -0.92
VPS50-209ENST00000467326 KCNC4Q03721 635 aa9.28□□□□□ -0.92
VPS50-209ENST00000467326 ONECUT3O60422 494 aaPredicted RBP9.27□□□□□ -0.93
VPS50-209ENST00000467326 RBM26Q5T8P6 1007 aaKnown RBP9.27□□□□□ -0.93
VPS50-209ENST00000467326 CERKQ8TCT0 537 aa9.27□□□□□ -0.93
VPS50-209ENST00000467326 NUTM2FA1L443 756 aa9.26□□□□□ -0.93
VPS50-209ENST00000467326 SOWAHBA6NEL2 793 aa9.26□□□□□ -0.93
VPS50-209ENST00000467326 PROX2Q3B8N5 592 aa9.25□□□□□ -0.93
VPS50-209ENST00000467326 ZFRQ96KR1 1074 aaKnown RBP9.23□□□□□ -0.93
VPS50-209ENST00000467326 TRIM6-TRIM34B2RNG4 842 aa9.22□□□□□ -0.93
VPS50-209ENST00000467326 PTGDRQ13258 359 aa9.22□□□□□ -0.93
VPS50-209ENST00000467326 RBM27Q9P2N5 1060 aaKnown RBP9.22□□□□□ -0.93
VPS50-209ENST00000467326 BCAMP50895 628 aa9.21□□□□□ -0.94
VPS50-209ENST00000467326 PRSS12P56730 875 aa9.21□□□□□ -0.94
VPS50-209ENST00000467326 GPIHBP1Q8IV16 184 aa9.21□□□□□ -0.94
VPS50-209ENST00000467326 CDCA7LQ96GN5 454 aa9.21□□□□□ -0.94
VPS50-209ENST00000467326 BCANQ96GW7 911 aa9.21□□□□□ -0.94
VPS50-209ENST00000467326 NPDC1Q9NQX5 325 aaPredicted RBP9.21□□□□□ -0.94
VPS50-209ENST00000467326 FCHSD2O94868 740 aa9.2□□□□□ -0.94
VPS50-209ENST00000467326 LMOD2Q6P5Q4 547 aa9.19□□□□□ -0.94
VPS50-209ENST00000467326 PADI6Q6TGC4 694 aa9.19□□□□□ -0.94
VPS50-209ENST00000467326 KIAA1468Q9P260 1216 aa9.19□□□□□ -0.94
VPS50-209ENST00000467326 TSKSQ9UJT2 592 aa9.19□□□□□ -0.94
VPS50-209ENST00000467326 GPR37O15354 613 aa9.18□□□□□ -0.94
VPS50-209ENST00000467326 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.18□□□□□ -0.94
VPS50-209ENST00000467326 TSR3Q9UJK0 312 aaKnown RBP9.18□□□□□ -0.94
VPS50-209ENST00000467326 LCE2BO14633 110 aa9.17□□□□□ -0.94
VPS50-209ENST00000467326 FAM98CQ17RN3 349 aaKnown RBP9.17□□□□□ -0.94
VPS50-209ENST00000467326 LRCH3Q96II8 777 aa9.17□□□□□ -0.94
VPS50-209ENST00000467326 WBP1LQ9NX94 342 aa9.17□□□□□ -0.94
VPS50-209ENST00000467326 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.17□□□□□ -0.94
VPS50-209ENST00000467326 NBPF26B4DH59 902 aa9.16□□□□□ -0.94
VPS50-209ENST00000467326 HIC1Q14526 733 aa9.16□□□□□ -0.94
VPS50-209ENST00000467326 PACS2Q86VP3 889 aa9.16□□□□□ -0.94
VPS50-209ENST00000467326 FAM198AQ9UFP1 575 aa9.16□□□□□ -0.94
VPS50-209ENST00000467326 TTC13Q8NBP0 860 aa9.15□□□□□ -0.94
VPS50-209ENST00000467326 SEPT9Q9UHD8 586 aaPredicted RBP9.15□□□□□ -0.94
VPS50-209ENST00000467326 GNPATO15228 680 aa9.13□□□□□ -0.95
VPS50-209ENST00000467326 TRAF7Q6Q0C0 670 aa9.13□□□□□ -0.95
VPS50-209ENST00000467326 GFRA3O60609 400 aa9.12□□□□□ -0.95
VPS50-209ENST00000467326 HPS5Q9UPZ3 1129 aa9.12□□□□□ -0.95
VPS50-209ENST00000467326 TATDN2Q93075 761 aa9.11□□□□□ -0.95
VPS50-209ENST00000467326 PNMA3Q9UL41 463 aa9.11□□□□□ -0.95
VPS50-209ENST00000467326 SMAPO00193 183 aa9.1□□□□□ -0.95
VPS50-209ENST00000467326 PPP4CP60510 307 aa9.1□□□□□ -0.95
VPS50-209ENST00000467326 NUDT18Q6ZVK8 323 aa9.1□□□□□ -0.95
VPS50-209ENST00000467326 C3orf80F5H4A9 247 aa9.09□□□□□ -0.95
VPS50-209ENST00000467326 ADGRG1Q9Y653 693 aa9.09□□□□□ -0.95
VPS50-209ENST00000467326 FECHP22830 423 aa9.08□□□□□ -0.96
VPS50-209ENST00000467326 NRG2O14511 850 aaPredicted RBP9.06□□□□□ -0.96
VPS50-209ENST00000467326 FAM161AQ3B820 660 aa9.06□□□□□ -0.96
VPS50-209ENST00000467326 RBM46Q8TBY0 533 aaKnown RBP9.06□□□□□ -0.96
VPS50-209ENST00000467326 V9GY48 417 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms