RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 RAPGEF6Q8TEU7 1601 aa11.84□□□□□ -0.51
SND1-205ENST00000467238 MAGI3Q5TCQ9 1506 aa11.84□□□□□ -0.51
SND1-205ENST00000467238 KIF21BO75037 1637 aa11.83□□□□□ -0.52
SND1-205ENST00000467238 P3H3Q8IVL6 736 aa11.83□□□□□ -0.52
SND1-205ENST00000467238 ATP10BO94823 1461 aa11.83□□□□□ -0.52
SND1-205ENST00000467238 CD109Q6YHK3 1445 aa11.82□□□□□ -0.52
SND1-205ENST00000467238 HOXB3P14651 431 aaPredicted RBP11.8□□□□□ -0.52
SND1-205ENST00000467238 MKRN3Q13064 507 aaKnown RBP11.8□□□□□ -0.52
SND1-205ENST00000467238 KCNH8Q96L42 1107 aa11.8□□□□□ -0.52
SND1-205ENST00000467238 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.8□□□□□ -0.523e-7■□□□□ 11.1
SND1-205ENST00000467238 ABCA9Q8IUA7 1624 aa11.79□□□□□ -0.52
SND1-205ENST00000467238 ILDR1Q86SU0 546 aaPredicted RBP11.79□□□□□ -0.52
SND1-205ENST00000467238 FAM9AQ8IZU1 332 aaPredicted RBP11.79□□□□□ -0.52
SND1-205ENST00000467238 ARID3CA6NKF2 412 aa11.78□□□□□ -0.52
SND1-205ENST00000467238 DPY19L2Q6NUT2 758 aa11.78□□□□□ -0.52
SND1-205ENST00000467238 FHOD3Q2V2M9 1422 aa11.77□□□□□ -0.52
SND1-205ENST00000467238 ADGRL1O94910 1474 aa11.77□□□□□ -0.52
SND1-205ENST00000467238 NUP153P49790 1475 aaKnown RBP11.77□□□□□ -0.52
SND1-205ENST00000467238 EFCAB5A4FU69 1503 aa11.77□□□□□ -0.52
SND1-205ENST00000467238 GOLGA2Q08379 1002 aa11.75□□□□□ -0.53
SND1-205ENST00000467238 ARAP3Q8WWN8 1544 aa11.75□□□□□ -0.53
SND1-205ENST00000467238 RANGAP1P46060 587 aaPredicted RBP11.73□□□□□ -0.53
SND1-205ENST00000467238 ZNF467Q7Z7K2 595 aaPredicted RBP11.73□□□□□ -0.53
SND1-205ENST00000467238 FBXO3Q9UK99 471 aa11.72□□□□□ -0.53
SND1-205ENST00000467238 HOXB1P14653 301 aaPredicted RBP11.71□□□□□ -0.53
SND1-205ENST00000467238 PSEN1P49768 467 aa11.71□□□□□ -0.53
SND1-205ENST00000467238 NEO1Q92859 1461 aa11.7□□□□□ -0.54
SND1-205ENST00000467238 PHLDB1Q86UU1 1377 aa11.7□□□□□ -0.54
SND1-205ENST00000467238 RNF166Q96A37 237 aaPredicted RBP11.7□□□□□ -0.54
SND1-205ENST00000467238 FRMPD1Q5SYB0 1578 aa11.67□□□□□ -0.54
SND1-205ENST00000467238 TTC37Q6PGP7 1564 aa11.67□□□□□ -0.54
SND1-205ENST00000467238 RICTORQ6R327 1708 aa11.66□□□□□ -0.54
SND1-205ENST00000467238 CDK13Q14004 1512 aaKnown RBP11.66□□□□□ -0.54
SND1-205ENST00000467238 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.66□□□□□ -0.54
SND1-205ENST00000467238 ARHGAP35Q9NRY4 1499 aa11.66□□□□□ -0.54
SND1-205ENST00000467238 CHRM1P11229 460 aaPredicted RBP11.66□□□□□ -0.54
SND1-205ENST00000467238 CFAP74Q9C0B2 1584 aa11.66□□□□□ -0.54
SND1-205ENST00000467238 ERBB3P21860 1342 aa11.65□□□□□ -0.54
SND1-205ENST00000467238 HECW1Q76N89 1606 aa11.65□□□□□ -0.54
SND1-205ENST00000467238 PLEKHD1A6NEE1 506 aa11.65□□□□□ -0.54
SND1-205ENST00000467238 UBTFP17480 764 aaKnown RBP11.65□□□□□ -0.54
SND1-205ENST00000467238 BOLA1Q9Y3E2 137 aa11.65□□□□□ -0.54
SND1-205ENST00000467238 LRRIQ1Q96JM4 1722 aa11.65□□□□□ -0.54
SND1-205ENST00000467238 FMN1Q68DA7 1419 aa11.64□□□□□ -0.55
SND1-205ENST00000467238 ADAMTSL3P82987 1691 aa11.63□□□□□ -0.55
SND1-205ENST00000467238 RAPGEF3O95398 923 aa11.63□□□□□ -0.55
SND1-205ENST00000467238 GSE1Q14687 1217 aa11.62□□□□□ -0.55
SND1-205ENST00000467238 BCORL1Q5H9F3 1711 aa11.62□□□□□ -0.55
SND1-205ENST00000467238 MYO5CQ9NQX4 1742 aa11.62□□□□□ -0.55
SND1-205ENST00000467238 FANCAO15360 1455 aa11.62□□□□□ -0.55
SND1-205ENST00000467238 HECW2Q9P2P5 1572 aa11.62□□□□□ -0.55
SND1-205ENST00000467238 AKNAQ7Z591 1439 aa11.61□□□□□ -0.55
SND1-205ENST00000467238 ARHGEF40Q8TER5 1519 aa11.61□□□□□ -0.55
SND1-205ENST00000467238 ZNF710Q8N1W2 664 aa11.61□□□□□ -0.55
SND1-205ENST00000467238 MYT1LQ9UL68 1186 aa11.61□□□□□ -0.55
SND1-205ENST00000467238 DENND4BO75064 1496 aaPredicted RBP11.6□□□□□ -0.55
SND1-205ENST00000467238 VARS2Q5ST30 1063 aaKnown RBP11.6□□□□□ -0.55
SND1-205ENST00000467238 VASPP50552 380 aaPredicted RBP11.59□□□□□ -0.55
SND1-205ENST00000467238 KIF14Q15058 1648 aa11.59□□□□□ -0.55
SND1-205ENST00000467238 ZMYM4Q5VZL5 1548 aa11.59□□□□□ -0.55
SND1-205ENST00000467238 DOK7Q18PE1 504 aa11.58□□□□□ -0.56
SND1-205ENST00000467238 MADDQ8WXG6 1647 aa11.57□□□□□ -0.56
SND1-205ENST00000467238 CABP2Q9NPB3 220 aa11.57□□□□□ -0.56
SND1-205ENST00000467238 PLCH2O75038 1416 aa11.57□□□□□ -0.56
SND1-205ENST00000467238 SIGLEC1Q9BZZ2 1709 aa11.57□□□□□ -0.56
SND1-205ENST00000467238 PDAP1Q13442 181 aaKnown RBP11.56□□□□□ -0.56
SND1-205ENST00000467238 CDC42BPBQ9Y5S2 1711 aa11.55□□□□□ -0.56
SND1-205ENST00000467238 PCF11O94913 1555 aaKnown RBP11.55□□□□□ -0.56
SND1-205ENST00000467238 TROQ12816 1431 aaPredicted RBP11.55□□□□□ -0.56
SND1-205ENST00000467238 ATP1B4Q9UN42 357 aaPredicted RBP11.55□□□□□ -0.56
SND1-205ENST00000467238 PTPRMP28827 1452 aa11.55□□□□□ -0.56
SND1-205ENST00000467238 CDK11AQ9UQ88 783 aaPredicted RBP11.54□□□□□ -0.56
SND1-205ENST00000467238 RIMS1Q86UR5 1692 aaKnown RBP11.54□□□□□ -0.56
SND1-205ENST00000467238 ZFYVE16Q7Z3T8 1539 aa11.54□□□□□ -0.56
SND1-205ENST00000467238 POGZQ7Z3K3 1410 aa11.53□□□□□ -0.56
SND1-205ENST00000467238 MAGI2Q86UL8 1455 aa11.53□□□□□ -0.56
SND1-205ENST00000467238 CASKIN1Q8WXD9 1431 aa11.52□□□□□ -0.56
SND1-205ENST00000467238 SCAPERQ9BY12 1400 aa11.52□□□□□ -0.56
SND1-205ENST00000467238 YEATS2Q9ULM3 1422 aa11.52□□□□□ -0.56
SND1-205ENST00000467238 G3V3G9 751 aa11.52□□□□□ -0.57
SND1-205ENST00000467238 CLIP1P30622 1438 aa11.52□□□□□ -0.57
SND1-205ENST00000467238 FER1L4A9Z1Z3 1794 aa11.51□□□□□ -0.57
SND1-205ENST00000467238 CCDC18Q5T9S5 1454 aa11.51□□□□□ -0.57
SND1-205ENST00000467238 PREX2Q70Z35 1606 aa11.51□□□□□ -0.57
SND1-205ENST00000467238 ZNF687Q8N1G0 1237 aa11.51□□□□□ -0.57
SND1-205ENST00000467238 ARID4BQ4LE39 1312 aaPredicted RBP11.51□□□□□ -0.57
SND1-205ENST00000467238 CDC42BPAQ5VT25 1732 aa11.51□□□□□ -0.57
SND1-205ENST00000467238 TMEM92Q6UXU6 159 aa11.5□□□□□ -0.57
SND1-205ENST00000467238 KLHL34Q8N239 644 aa11.5□□□□□ -0.57
SND1-205ENST00000467238 ARHGAP5Q13017 1502 aa11.5□□□□□ -0.57
SND1-205ENST00000467238 EFCAB2Q5VUJ9 269 aa11.49□□□□□ -0.57
SND1-205ENST00000467238 FYCO1Q9BQS8 1478 aa11.49□□□□□ -0.57
SND1-205ENST00000467238 KDM5CP41229 1560 aa11.49□□□□□ -0.57
SND1-205ENST00000467238 SETD1BQ9UPS6 1966 aaKnown RBP11.48□□□□□ -0.57
SND1-205ENST00000467238 ITSN2Q9NZM3 1697 aa11.47□□□□□ -0.57
SND1-205ENST00000467238 ZNF518AQ6AHZ1 1483 aa11.47□□□□□ -0.57
SND1-205ENST00000467238 GPR153Q6NV75 609 aa11.47□□□□□ -0.57
SND1-205ENST00000467238 ATP10AO60312 1499 aa11.46□□□□□ -0.57
SND1-205ENST00000467238 ABCC1P33527 1531 aa11.45□□□□□ -0.58
SND1-205ENST00000467238 C9orf84Q5VXU9 1444 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms