RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 GPATCH8Q9UKJ3 1502 aaKnown RBP9.4□□□□□ -0.9
CXXC4-202ENST00000466963 MLECQ14165 292 aa9.4□□□□□ -0.9
CXXC4-202ENST00000466963 TNRQ92752 1358 aa9.4□□□□□ -0.9
CXXC4-202ENST00000466963 ABCC3O15438 1527 aa9.4□□□□□ -0.9
CXXC4-202ENST00000466963 IQGAP1P46940 1657 aa9.4□□□□□ -0.9
CXXC4-202ENST00000466963 NCOA2Q15596 1464 aa9.4□□□□□ -0.91
CXXC4-202ENST00000466963 NCOA3Q9Y6Q9 1424 aa9.39□□□□□ -0.91
CXXC4-202ENST00000466963 ANKLE2Q86XL3 938 aa9.39□□□□□ -0.91
CXXC4-202ENST00000466963 SYCP2Q9BX26 1530 aa9.38□□□□□ -0.91
CXXC4-202ENST00000466963 NPHP4O75161 1426 aaPredicted RBP9.38□□□□□ -0.91
CXXC4-202ENST00000466963 CEP162Q5TB80 1403 aa9.38□□□□□ -0.91
CXXC4-202ENST00000466963 FOXD1Q16676 465 aa9.38□□□□□ -0.91
CXXC4-202ENST00000466963 AFAP1Q8N556 730 aa9.38□□□□□ -0.91
CXXC4-202ENST00000466963 LRRIQ1Q96JM4 1722 aa9.38□□□□□ -0.91
CXXC4-202ENST00000466963 ARHGAP31Q2M1Z3 1444 aa9.37□□□□□ -0.91
CXXC4-202ENST00000466963 FAM135BQ49AJ0 1406 aa9.37□□□□□ -0.91
CXXC4-202ENST00000466963 SLIT1O75093 1534 aa9.37□□□□□ -0.91
CXXC4-202ENST00000466963 MYT1LQ9UL68 1186 aa9.36□□□□□ -0.91
CXXC4-202ENST00000466963 CCDC141Q6ZP82 1450 aa9.36□□□□□ -0.91
CXXC4-202ENST00000466963 CCNB3Q8WWL7 1395 aa9.36□□□□□ -0.91
CXXC4-202ENST00000466963 MIA2Q96PC5 1412 aa9.36□□□□□ -0.91
CXXC4-202ENST00000466963 CEBPAP49715 358 aaPredicted RBP9.36□□□□□ -0.91
CXXC4-202ENST00000466963 UGGT1Q9NYU2 1555 aa9.35□□□□□ -0.91
CXXC4-202ENST00000466963 ARHGAP23Q9P227 1491 aa9.34□□□□□ -0.91
CXXC4-202ENST00000466963 NKTRP30414 1462 aaKnown RBP9.34□□□□□ -0.91
CXXC4-202ENST00000466963 CDK12Q9NYV4 1490 aaPredicted RBP9.34□□□□□ -0.91
CXXC4-202ENST00000466963 MBD5Q9P267 1494 aa9.33□□□□□ -0.92
CXXC4-202ENST00000466963 ZNF335Q9H4Z2 1342 aaPredicted RBP9.32□□□□□ -0.92
CXXC4-202ENST00000466963 ARID3CA6NKF2 412 aa9.32□□□□□ -0.92
CXXC4-202ENST00000466963 MAP3K1Q13233 1512 aa9.32□□□□□ -0.92
CXXC4-202ENST00000466963 NCKAP5LQ9HCH0 1330 aa9.32□□□□□ -0.92
CXXC4-202ENST00000466963 LRRC7Q96NW7 1537 aa9.32□□□□□ -0.92
CXXC4-202ENST00000466963 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.31□□□□□ -0.92
CXXC4-202ENST00000466963 NWD1Q149M9 1564 aa9.31□□□□□ -0.92
CXXC4-202ENST00000466963 FGD6Q6ZV73 1430 aa9.31□□□□□ -0.92
CXXC4-202ENST00000466963 CFDP1Q9UEE9 299 aaPredicted RBP9.31□□□□□ -0.92
CXXC4-202ENST00000466963 TIAM1Q13009 1591 aa9.3□□□□□ -0.92
CXXC4-202ENST00000466963 SCAF11Q99590 1463 aaKnown RBP9.3□□□□□ -0.92
CXXC4-202ENST00000466963 PTPN23Q9H3S7 1636 aa9.29□□□□□ -0.92
CXXC4-202ENST00000466963 ALKQ9UM73 1620 aa9.29□□□□□ -0.92
CXXC4-202ENST00000466963 LMTK2Q8IWU2 1503 aa9.29□□□□□ -0.92
CXXC4-202ENST00000466963 HSPA1LP34931 641 aa9.29□□□□□ -0.92
CXXC4-202ENST00000466963 ERVK-7P63135 1459 aa9.28□□□□□ -0.92
CXXC4-202ENST00000466963 UBR1Q8IWV7 1749 aa9.28□□□□□ -0.92
CXXC4-202ENST00000466963 DUOX2Q9NRD8 1548 aa9.28□□□□□ -0.92
CXXC4-202ENST00000466963 DIP2AQ14689 1571 aa9.27□□□□□ -0.92
CXXC4-202ENST00000466963 MTUS2Q5JR59 1369 aa9.27□□□□□ -0.93
CXXC4-202ENST00000466963 ERBINQ96RT1 1412 aa9.27□□□□□ -0.93
CXXC4-202ENST00000466963 UBTFP17480 764 aaKnown RBP9.26□□□□□ -0.93
CXXC4-202ENST00000466963 PRDM15P57071 1507 aaPredicted RBP9.26□□□□□ -0.93
CXXC4-202ENST00000466963 HDGFP51858 240 aaKnown RBP9.25□□□□□ -0.93
CXXC4-202ENST00000466963 PIK3R4Q99570 1358 aa9.25□□□□□ -0.93
CXXC4-202ENST00000466963 SPATA31A6Q5VVP1 1343 aa9.25□□□□□ -0.93
CXXC4-202ENST00000466963 RPRD2Q5VT52 1461 aaKnown RBP9.24□□□□□ -0.93
CXXC4-202ENST00000466963 PLPPR3Q6T4P5 718 aa9.24□□□□□ -0.93
CXXC4-202ENST00000466963 EID1Q9Y6B2 187 aa9.24□□□□□ -0.93
CXXC4-202ENST00000466963 WASHC2CQ9Y4E1 1318 aa9.23□□□□□ -0.93
CXXC4-202ENST00000466963 SHPRHQ149N8 1683 aa9.23□□□□□ -0.93
CXXC4-202ENST00000466963 JCADQ9P266 1359 aa9.22□□□□□ -0.93
CXXC4-202ENST00000466963 TSPY4P0CV99 314 aa9.22□□□□□ -0.93
CXXC4-202ENST00000466963 TSPY10P0CW01 314 aa9.22□□□□□ -0.93
CXXC4-202ENST00000466963 AHDC1Q5TGY3 1603 aaPredicted RBP9.22□□□□□ -0.93
CXXC4-202ENST00000466963 KANK1Q14678 1352 aa9.22□□□□□ -0.93
CXXC4-202ENST00000466963 DCCP43146 1447 aa9.21□□□□□ -0.93
CXXC4-202ENST00000466963 ZNF772Q68DY9 489 aaPredicted RBP9.21□□□□□ -0.94
CXXC4-202ENST00000466963 MROH1Q8NDA8 1641 aa9.2□□□□□ -0.94
CXXC4-202ENST00000466963 KCNA6P17658 529 aa9.2□□□□□ -0.94
CXXC4-202ENST00000466963 GGT6Q6P531 493 aa9.2□□□□□ -0.94
CXXC4-202ENST00000466963 STRCP1A6NGW2 1772 aa9.2□□□□□ -0.94
CXXC4-202ENST00000466963 MYOM3Q5VTT5 1437 aa9.2□□□□□ -0.94
CXXC4-202ENST00000466963 SETD1AO15047 1707 aaKnown RBP9.2□□□□□ -0.94
CXXC4-202ENST00000466963 ATP1B4Q9UN42 357 aaPredicted RBP9.2□□□□□ -0.94
CXXC4-202ENST00000466963 XIRP1Q702N8 1843 aaKnown RBP9.2□□□□□ -0.94
CXXC4-202ENST00000466963 EFCAB6Q5THR3 1501 aa9.19□□□□□ -0.94
CXXC4-202ENST00000466963 HNRNPMP52272 730 aaKnown RBP eCLIP9.19□□□□□ -0.94
CXXC4-202ENST00000466963 ADGRB3O60242 1522 aa9.18□□□□□ -0.94
CXXC4-202ENST00000466963 TET3O43151 1660 aa9.18□□□□□ -0.94
CXXC4-202ENST00000466963 TMEM2Q9UHN6 1383 aa9.18□□□□□ -0.94
CXXC4-202ENST00000466963 CROCC2H7BZ55 1655 aa9.17□□□□□ -0.94
CXXC4-202ENST00000466963 KIF3BO15066 747 aa9.17□□□□□ -0.94
CXXC4-202ENST00000466963 SLC52A1Q9NWF4 448 aa9.17□□□□□ -0.94
CXXC4-202ENST00000466963 MSH6P52701 1360 aa9.17□□□□□ -0.94
CXXC4-202ENST00000466963 ROBO1Q9Y6N7 1651 aa9.16□□□□□ -0.94
CXXC4-202ENST00000466963 PHLPP1O60346 1717 aa9.16□□□□□ -0.94
CXXC4-202ENST00000466963 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.16□□□□□ -0.94
CXXC4-202ENST00000466963 CEP152O94986 1710 aa9.15□□□□□ -0.94
CXXC4-202ENST00000466963 PIP4K2BP78356 416 aa9.15□□□□□ -0.94
CXXC4-202ENST00000466963 PLEKHG1Q9ULL1 1385 aa9.14□□□□□ -0.95
CXXC4-202ENST00000466963 SCAF1Q9H7N4 1312 aaKnown RBP9.14□□□□□ -0.95
CXXC4-202ENST00000466963 ZNF777Q9ULD5 760 aaPredicted RBP9.14□□□□□ -0.95
CXXC4-202ENST00000466963 CHD2O14647 1828 aaKnown RBP9.14□□□□□ -0.95
CXXC4-202ENST00000466963 NOS1P29475 1434 aa9.14□□□□□ -0.95
CXXC4-202ENST00000466963 LAMC1P11047 1609 aa9.14□□□□□ -0.95
CXXC4-202ENST00000466963 COL16A1Q07092 1604 aaPredicted RBP9.13□□□□□ -0.95
CXXC4-202ENST00000466963 CCDC125Q86Z20 511 aa9.13□□□□□ -0.95
CXXC4-202ENST00000466963 PIK3C2BO00750 1634 aa9.13□□□□□ -0.95
CXXC4-202ENST00000466963 TXNDC2Q86VQ3 553 aa9.11□□□□□ -0.95
CXXC4-202ENST00000466963 ADGRL2O95490 1459 aa9.11□□□□□ -0.95
CXXC4-202ENST00000466963 PRAG1Q86YV5 1406 aa9.11□□□□□ -0.95
CXXC4-202ENST00000466963 TRPM2O94759 1503 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms