RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 EPAS1Q99814 870 aa8.98□□□□□ -0.97
GTF3C3-209ENST00000466862 TSHZ2Q9NRE2 1034 aa8.98□□□□□ -0.97
GTF3C3-209ENST00000466862 SPDYE16A6NNV3 312 aaPredicted RBP8.97□□□□□ -0.97
GTF3C3-209ENST00000466862 DDX12PQ92771 950 aa8.96□□□□□ -0.98
GTF3C3-209ENST00000466862 HCSTQ9UBK5 93 aa8.96□□□□□ -0.98
GTF3C3-209ENST00000466862 PRIM1P49642 420 aaKnown RBP8.95□□□□□ -0.98
GTF3C3-209ENST00000466862 EN1Q05925 392 aaPredicted RBP8.95□□□□□ -0.98
GTF3C3-209ENST00000466862 PROX2Q3B8N5 592 aa8.94□□□□□ -0.98
GTF3C3-209ENST00000466862 NBR1Q14596 966 aa8.93□□□□□ -0.98
GTF3C3-209ENST00000466862 C6orf132Q5T0Z8 1188 aa8.93□□□□□ -0.98
GTF3C3-209ENST00000466862 KCTD12Q96CX2 325 aaKnown RBP8.93□□□□□ -0.98
GTF3C3-209ENST00000466862 WDR70Q9NW82 654 aa8.92□□□□□ -0.98
GTF3C3-209ENST00000466862 TSR1Q2NL82 804 aaKnown RBP8.91□□□□□ -0.98
GTF3C3-209ENST00000466862 KCNV2Q8TDN2 545 aa8.91□□□□□ -0.98
GTF3C3-209ENST00000466862 RABGEF1Q9UJ41 708 aa8.91□□□□□ -0.98
GTF3C3-209ENST00000466862 RBM33Q96EV2 1170 aaKnown RBP8.9□□□□□ -0.98
GTF3C3-209ENST00000466862 NBPF3Q9H094 633 aa8.89□□□□□ -0.99
GTF3C3-209ENST00000466862 THSD4Q6ZMP0 1018 aa8.88□□□□□ -0.99
GTF3C3-209ENST00000466862 TRIM6-TRIM34B2RNG4 842 aa8.87□□□□□ -0.99
GTF3C3-209ENST00000466862 ONECUT3O60422 494 aaPredicted RBP8.87□□□□□ -0.99
GTF3C3-209ENST00000466862 OSBPP22059 807 aa8.87□□□□□ -0.99
GTF3C3-209ENST00000466862 PLCB2Q00722 1185 aa8.87□□□□□ -0.99
GTF3C3-209ENST00000466862 MRPL50Q8N5N7 158 aaKnown RBP8.87□□□□□ -0.99
GTF3C3-209ENST00000466862 MAP3K7O43318 606 aa8.85□□□□□ -0.99
GTF3C3-209ENST00000466862 CDHR5Q9HBB8 845 aa8.85□□□□□ -0.99
GTF3C3-209ENST00000466862 PTPN5P54829 565 aa8.84□□□□□ -0.99
GTF3C3-209ENST00000466862 ARHGEF1Q92888 912 aaKnown RBP8.84□□□□□ -0.99
GTF3C3-209ENST00000466862 WNT2BQ93097 391 aa8.84□□□□□ -0.99
GTF3C3-209ENST00000466862 STAC3Q96MF2 364 aa8.84□□□□□ -0.99
GTF3C3-209ENST00000466862 TSKSQ9UJT2 592 aa8.84□□□□□ -0.99
GTF3C3-209ENST00000466862 GRXCR2A6NFK2 248 aa8.83□□□□□ -1
GTF3C3-209ENST00000466862 LAPTM4BQ86VI4 370 aa8.83□□□□□ -1
GTF3C3-209ENST00000466862 KIAA1468Q9P260 1216 aa8.83□□□□□ -1
GTF3C3-209ENST00000466862 FAM198AQ9UFP1 575 aa8.83□□□□□ -1
GTF3C3-209ENST00000466862 SEPT9Q9UHD8 586 aaPredicted RBP8.81□□□□□ -1
GTF3C3-209ENST00000466862 C3orf80F5H4A9 247 aa8.8□□□□□ -1
GTF3C3-209ENST00000466862 MLLT3P42568 568 aaPredicted RBP8.8□□□□□ -1
GTF3C3-209ENST00000466862 ZFRQ96KR1 1074 aaKnown RBP8.79□□□□□ -1
GTF3C3-209ENST00000466862 RBM27Q9P2N5 1060 aaKnown RBP8.79□□□□□ -1
GTF3C3-209ENST00000466862 FAM98CQ17RN3 349 aaKnown RBP8.78□□□□□ -1
GTF3C3-209ENST00000466862 CDCA7LQ96GN5 454 aa8.78□□□□□ -1
GTF3C3-209ENST00000466862 NPDC1Q9NQX5 325 aaPredicted RBP8.78□□□□□ -1
GTF3C3-209ENST00000466862 SOWAHBA6NEL2 793 aa8.77□□□□□ -1.01
GTF3C3-209ENST00000466862 GOLGA8CPA6NN73 597 aa8.77□□□□□ -1.01
GTF3C3-209ENST00000466862 BCAMP50895 628 aa8.77□□□□□ -1.01
GTF3C3-209ENST00000466862 PRSS12P56730 875 aa8.77□□□□□ -1.01
GTF3C3-209ENST00000466862 TTC13Q8NBP0 860 aa8.77□□□□□ -1.01
GTF3C3-209ENST00000466862 ANKK1Q8NFD2 765 aa8.77□□□□□ -1.01
GTF3C3-209ENST00000466862 CERKQ8TCT0 537 aa8.77□□□□□ -1.01
GTF3C3-209ENST00000466862 P3H3Q8IVL6 736 aa8.76□□□□□ -1.01
GTF3C3-209ENST00000466862 IFFO2Q5TF58 517 aa8.74□□□□□ -1.01
GTF3C3-209ENST00000466862 PACS2Q86VP3 889 aa8.72□□□□□ -1.01
GTF3C3-209ENST00000466862 NBPF26B4DH59 902 aa8.71□□□□□ -1.02
GTF3C3-209ENST00000466862 SMAPO00193 183 aa8.71□□□□□ -1.02
GTF3C3-209ENST00000466862 PADI6Q6TGC4 694 aa8.71□□□□□ -1.02
GTF3C3-209ENST00000466862 ITGBL1O95965 494 aaPredicted RBP8.7□□□□□ -1.02
GTF3C3-209ENST00000466862 WBP1LQ9NX94 342 aa8.7□□□□□ -1.02
GTF3C3-209ENST00000466862 SEMA3EO15041 775 aa8.69□□□□□ -1.02
GTF3C3-209ENST00000466862 TATDN2Q93075 761 aa8.69□□□□□ -1.02
GTF3C3-209ENST00000466862 PTGDRQ13258 359 aa8.68□□□□□ -1.02
GTF3C3-209ENST00000466862 NYAP1Q6ZVC0 841 aa8.68□□□□□ -1.02
GTF3C3-209ENST00000466862 LRCH3Q96II8 777 aa8.68□□□□□ -1.02
GTF3C3-209ENST00000466862 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.68□□□□□ -1.02
GTF3C3-209ENST00000466862 PNMA3Q9UL41 463 aa8.67□□□□□ -1.02
GTF3C3-209ENST00000466862 HPS5Q9UPZ3 1129 aa8.67□□□□□ -1.02
GTF3C3-209ENST00000466862 KDM2AQ9Y2K7 1162 aa8.67□□□□□ -1.02
GTF3C3-209ENST00000466862 A0A0G2JS52 829 aa8.66□□□□□ -1.02
GTF3C3-209ENST00000466862 TESPA1A2RU30 521 aaPredicted RBP8.66□□□□□ -1.02
GTF3C3-209ENST00000466862 NUDT18Q6ZVK8 323 aa8.66□□□□□ -1.02
GTF3C3-209ENST00000466862 SAMD7Q7Z3H4 446 aa8.66□□□□□ -1.02
GTF3C3-209ENST00000466862 TSR3Q9UJK0 312 aaKnown RBP8.66□□□□□ -1.02
GTF3C3-209ENST00000466862 HAP1P54257 671 aaPredicted RBP8.64□□□□□ -1.03
GTF3C3-209ENST00000466862 EYA1Q99502 592 aa8.64□□□□□ -1.03
GTF3C3-209ENST00000466862 GPR37O15354 613 aa8.63□□□□□ -1.03
GTF3C3-209ENST00000466862 IRX2Q9BZI1 471 aaPredicted RBP8.61□□□□□ -1.03
GTF3C3-209ENST00000466862 ADGRG1Q9Y653 693 aa8.6□□□□□ -1.03
GTF3C3-209ENST00000466862 RGS20O76081 388 aa8.58□□□□□ -1.04
GTF3C3-209ENST00000466862 SWT1Q5T5J6 900 aaKnown RBP8.58□□□□□ -1.04
GTF3C3-209ENST00000466862 FCHSD2O94868 740 aa8.57□□□□□ -1.04
GTF3C3-209ENST00000466862 RBM26Q5T8P6 1007 aaKnown RBP8.57□□□□□ -1.04
GTF3C3-209ENST00000466862 NUTM2FA1L443 756 aa8.56□□□□□ -1.04
GTF3C3-209ENST00000466862 APLP1P51693 650 aa8.56□□□□□ -1.04
GTF3C3-209ENST00000466862 PPP4CP60510 307 aa8.56□□□□□ -1.04
GTF3C3-209ENST00000466862 TJAP1Q5JTD0 557 aa8.56□□□□□ -1.04
GTF3C3-209ENST00000466862 KCNC4Q03721 635 aa8.54□□□□□ -1.04
GTF3C3-209ENST00000466862 FAM161AQ3B820 660 aa8.54□□□□□ -1.04
GTF3C3-209ENST00000466862 TMEM134Q9H6X4 195 aa8.54□□□□□ -1.04
GTF3C3-209ENST00000466862 DNAJB2P25686 324 aa8.53□□□□□ -1.04
GTF3C3-209ENST00000466862 HIC1Q14526 733 aa8.53□□□□□ -1.04
GTF3C3-209ENST00000466862 SLF2Q8IX21 1173 aa8.53□□□□□ -1.04
GTF3C3-209ENST00000466862 VSIG10Q8N0Z9 540 aa8.53□□□□□ -1.04
GTF3C3-209ENST00000466862 MTRQ99707 1265 aa8.53□□□□□ -1.04
GTF3C3-209ENST00000466862 RNF40O75150 1001 aa8.52□□□□□ -1.05
GTF3C3-209ENST00000466862 FECHP22830 423 aa8.51□□□□□ -1.05
GTF3C3-209ENST00000466862 RBM46Q8TBY0 533 aaKnown RBP8.51□□□□□ -1.05
GTF3C3-209ENST00000466862 PXYLP1Q8TE99 480 aa8.51□□□□□ -1.05
GTF3C3-209ENST00000466862 RCCD1A6NED2 376 aa8.5□□□□□ -1.05
GTF3C3-209ENST00000466862 SMYD5Q6GMV2 418 aa8.49□□□□□ -1.05
GTF3C3-209ENST00000466862 METTL3Q86U44 580 aaKnown RBP8.49□□□□□ -1.05
GTF3C3-209ENST00000466862 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms