RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 DDX12PQ92771 950 aa9.93□□□□□ -0.82
CCDC58-203ENST00000466854 PROX2Q3B8N5 592 aa9.92□□□□□ -0.82
CCDC58-203ENST00000466854 STAC3Q96MF2 364 aa9.92□□□□□ -0.82
CCDC58-203ENST00000466854 EPAS1Q99814 870 aa9.92□□□□□ -0.82
CCDC58-203ENST00000466854 C6orf132Q5T0Z8 1188 aa9.9□□□□□ -0.82
CCDC58-203ENST00000466854 ARIH1Q9Y4X5 557 aaPredicted RBP9.9□□□□□ -0.82
CCDC58-203ENST00000466854 SPDYE16A6NNV3 312 aaPredicted RBP9.88□□□□□ -0.83
CCDC58-203ENST00000466854 RBM33Q96EV2 1170 aaKnown RBP9.88□□□□□ -0.83
CCDC58-203ENST00000466854 WDR70Q9NW82 654 aa9.88□□□□□ -0.83
CCDC58-203ENST00000466854 NBR1Q14596 966 aa9.87□□□□□ -0.83
CCDC58-203ENST00000466854 MRPL50Q8N5N7 158 aaKnown RBP9.87□□□□□ -0.83
CCDC58-203ENST00000466854 NBPF3Q9H094 633 aa9.87□□□□□ -0.83
CCDC58-203ENST00000466854 TSHZ2Q9NRE2 1034 aa9.87□□□□□ -0.83
CCDC58-203ENST00000466854 PLA2G2EQ9NZK7 142 aa9.87□□□□□ -0.83
CCDC58-203ENST00000466854 RABGEF1Q9UJ41 708 aa9.87□□□□□ -0.83
CCDC58-203ENST00000466854 EN1Q05925 392 aaPredicted RBP9.86□□□□□ -0.83
CCDC58-203ENST00000466854 THSD4Q6ZMP0 1018 aa9.86□□□□□ -0.83
CCDC58-203ENST00000466854 PRIM1P49642 420 aaKnown RBP9.85□□□□□ -0.83
CCDC58-203ENST00000466854 TSR1Q2NL82 804 aaKnown RBP9.84□□□□□ -0.83
CCDC58-203ENST00000466854 WNT2BQ93097 391 aa9.84□□□□□ -0.83
CCDC58-203ENST00000466854 PTPN5P54829 565 aa9.83□□□□□ -0.84
CCDC58-203ENST00000466854 GOLGA8CPA6NN73 597 aa9.82□□□□□ -0.84
CCDC58-203ENST00000466854 KIAA1468Q9P260 1216 aa9.82□□□□□ -0.84
CCDC58-203ENST00000466854 TRIM6-TRIM34B2RNG4 842 aa9.81□□□□□ -0.84
CCDC58-203ENST00000466854 MAP3K7O43318 606 aa9.81□□□□□ -0.84
CCDC58-203ENST00000466854 ONECUT3O60422 494 aaPredicted RBP9.8□□□□□ -0.84
CCDC58-203ENST00000466854 GRXCR2A6NFK2 248 aa9.79□□□□□ -0.84
CCDC58-203ENST00000466854 IRX2Q9BZI1 471 aaPredicted RBP9.79□□□□□ -0.84
CCDC58-203ENST00000466854 LAPTM4BQ86VI4 370 aa9.78□□□□□ -0.84
CCDC58-203ENST00000466854 SEPT9Q9UHD8 586 aaPredicted RBP9.78□□□□□ -0.84
CCDC58-203ENST00000466854 TSKSQ9UJT2 592 aa9.78□□□□□ -0.84
CCDC58-203ENST00000466854 OSBPP22059 807 aa9.77□□□□□ -0.85
CCDC58-203ENST00000466854 ZFRQ96KR1 1074 aaKnown RBP9.76□□□□□ -0.85
CCDC58-203ENST00000466854 BCAMP50895 628 aa9.75□□□□□ -0.85
CCDC58-203ENST00000466854 ANKK1Q8NFD2 765 aa9.75□□□□□ -0.85
CCDC58-203ENST00000466854 KCNV2Q8TDN2 545 aa9.75□□□□□ -0.85
CCDC58-203ENST00000466854 CDHR5Q9HBB8 845 aa9.75□□□□□ -0.85
CCDC58-203ENST00000466854 FAM198AQ9UFP1 575 aa9.74□□□□□ -0.85
CCDC58-203ENST00000466854 SOWAHBA6NEL2 793 aa9.73□□□□□ -0.85
CCDC58-203ENST00000466854 FAM98CQ17RN3 349 aaKnown RBP9.72□□□□□ -0.85
CCDC58-203ENST00000466854 CDCA7LQ96GN5 454 aa9.72□□□□□ -0.85
CCDC58-203ENST00000466854 C3orf80F5H4A9 247 aa9.71□□□□□ -0.86
CCDC58-203ENST00000466854 PRSS12P56730 875 aa9.71□□□□□ -0.86
CCDC58-203ENST00000466854 ARHGEF1Q92888 912 aaKnown RBP9.71□□□□□ -0.86
CCDC58-203ENST00000466854 PACS2Q86VP3 889 aa9.7□□□□□ -0.86
CCDC58-203ENST00000466854 MLLT3P42568 568 aaPredicted RBP9.69□□□□□ -0.86
CCDC58-203ENST00000466854 CERKQ8TCT0 537 aa9.69□□□□□ -0.86
CCDC58-203ENST00000466854 SMAPO00193 183 aa9.68□□□□□ -0.86
CCDC58-203ENST00000466854 IFFO2Q5TF58 517 aa9.68□□□□□ -0.86
CCDC58-203ENST00000466854 NPDC1Q9NQX5 325 aaPredicted RBP9.67□□□□□ -0.86
CCDC58-203ENST00000466854 WBP1LQ9NX94 342 aa9.67□□□□□ -0.86
CCDC58-203ENST00000466854 RGS20O76081 388 aa9.66□□□□□ -0.86
CCDC58-203ENST00000466854 PLCB2Q00722 1185 aa9.66□□□□□ -0.86
CCDC58-203ENST00000466854 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.65□□□□□ -0.86
CCDC58-203ENST00000466854 RBM27Q9P2N5 1060 aaKnown RBP9.65□□□□□ -0.86
CCDC58-203ENST00000466854 TTC13Q8NBP0 860 aa9.64□□□□□ -0.87
CCDC58-203ENST00000466854 TATDN2Q93075 761 aa9.64□□□□□ -0.87
CCDC58-203ENST00000466854 LRCH3Q96II8 777 aa9.64□□□□□ -0.87
CCDC58-203ENST00000466854 HPS5Q9UPZ3 1129 aa9.63□□□□□ -0.87
CCDC58-203ENST00000466854 NBPF26B4DH59 902 aa9.62□□□□□ -0.87
CCDC58-203ENST00000466854 ITGBL1O95965 494 aaPredicted RBP9.62□□□□□ -0.87
CCDC58-203ENST00000466854 PADI6Q6TGC4 694 aa9.62□□□□□ -0.87
CCDC58-203ENST00000466854 NYAP1Q6ZVC0 841 aa9.62□□□□□ -0.87
CCDC58-203ENST00000466854 TSR3Q9UJK0 312 aaKnown RBP9.62□□□□□ -0.87
CCDC58-203ENST00000466854 PNMA3Q9UL41 463 aa9.62□□□□□ -0.87
CCDC58-203ENST00000466854 NUDT18Q6ZVK8 323 aa9.61□□□□□ -0.87
CCDC58-203ENST00000466854 SAMD7Q7Z3H4 446 aa9.61□□□□□ -0.87
CCDC58-203ENST00000466854 A0A0G2JS52 829 aa9.6□□□□□ -0.87
CCDC58-203ENST00000466854 P3H3Q8IVL6 736 aa9.6□□□□□ -0.87
CCDC58-203ENST00000466854 SEMA3EO15041 775 aa9.57□□□□□ -0.88
CCDC58-203ENST00000466854 PTGDRQ13258 359 aa9.56□□□□□ -0.88
CCDC58-203ENST00000466854 PPP4CP60510 307 aa9.54□□□□□ -0.88
CCDC58-203ENST00000466854 LOC100996750A0A140TA64 210 aa9.53□□□□□ -0.88
CCDC58-203ENST00000466854 EYA1Q99502 592 aa9.53□□□□□ -0.88
CCDC58-203ENST00000466854 KRTAP4-6Q9BYQ5 205 aa9.53□□□□□ -0.88
CCDC58-203ENST00000466854 KCNC4Q03721 635 aa9.52□□□□□ -0.89
CCDC58-203ENST00000466854 SWT1Q5T5J6 900 aaKnown RBP9.51□□□□□ -0.89
CCDC58-203ENST00000466854 NUTM2FA1L443 756 aa9.49□□□□□ -0.89
CCDC58-203ENST00000466854 RNF40O75150 1001 aa9.49□□□□□ -0.89
CCDC58-203ENST00000466854 TJAP1Q5JTD0 557 aa9.49□□□□□ -0.89
CCDC58-203ENST00000466854 TESPA1A2RU30 521 aaPredicted RBP9.48□□□□□ -0.89
CCDC58-203ENST00000466854 APLP1P51693 650 aa9.48□□□□□ -0.89
CCDC58-203ENST00000466854 HAP1P54257 671 aaPredicted RBP9.48□□□□□ -0.89
CCDC58-203ENST00000466854 KDM2AQ9Y2K7 1162 aa9.47□□□□□ -0.89
CCDC58-203ENST00000466854 ADGRG1Q9Y653 693 aa9.47□□□□□ -0.89
CCDC58-203ENST00000466854 HDGFP51858 240 aaKnown RBP9.46□□□□□ -0.9
CCDC58-203ENST00000466854 FAM161AQ3B820 660 aa9.46□□□□□ -0.9
CCDC58-203ENST00000466854 MTRQ99707 1265 aa9.46□□□□□ -0.9
CCDC58-203ENST00000466854 Q6ZNB5 142 aa9.45□□□□□ -0.9
CCDC58-203ENST00000466854 FCHSD2O94868 740 aa9.44□□□□□ -0.9
CCDC58-203ENST00000466854 RBM26Q5T8P6 1007 aaKnown RBP9.44□□□□□ -0.9
CCDC58-203ENST00000466854 SLF2Q8IX21 1173 aa9.44□□□□□ -0.9
CCDC58-203ENST00000466854 DNAJB2P25686 324 aa9.42□□□□□ -0.9
CCDC58-203ENST00000466854 RBM46Q8TBY0 533 aaKnown RBP9.42□□□□□ -0.9
CCDC58-203ENST00000466854 ZNF516Q92618 1163 aa9.42□□□□□ -0.9
CCDC58-203ENST00000466854 TMEM134Q9H6X4 195 aa9.42□□□□□ -0.9
CCDC58-203ENST00000466854 IL21Q9HBE4 155 aa9.42□□□□□ -0.9
CCDC58-203ENST00000466854 GPR37O15354 613 aa9.41□□□□□ -0.9
CCDC58-203ENST00000466854 RCCD1A6NED2 376 aa9.4□□□□□ -0.9
CCDC58-203ENST00000466854 NECTIN2Q92692 538 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms