RNA–Protein interactions for RNA: ENST00000466539.1

PSME4-204, Transcript of proteasome activator subunit 4, humanhuman

TSL 4

Gene PSME4, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-204ENST00000466539 RIMBP2O15034 1052 aa10.49□□□□□ -0.73
PSME4-204ENST00000466539 HOXB1P14653 301 aaPredicted RBP10.49□□□□□ -0.73
PSME4-204ENST00000466539 FANCD2Q9BXW9 1451 aa10.49□□□□□ -0.73
PSME4-204ENST00000466539 KIF21AQ7Z4S6 1674 aa10.48□□□□□ -0.73
PSME4-204ENST00000466539 WRNQ14191 1432 aaPredicted RBP eCLIP10.48□□□□□ -0.73
PSME4-204ENST00000466539 CUX1P39880 1505 aa10.48□□□□□ -0.73
PSME4-204ENST00000466539 PDS5BQ9NTI5 1447 aa10.46□□□□□ -0.74
PSME4-204ENST00000466539 PTGER2P43116 358 aa10.45□□□□□ -0.74
PSME4-204ENST00000466539 DDX12PQ92771 950 aa10.45□□□□□ -0.74
PSME4-204ENST00000466539 GRXCR2A6NFK2 248 aa10.44□□□□□ -0.74
PSME4-204ENST00000466539 LHX6Q9UPM6 363 aa10.44□□□□□ -0.74
PSME4-204ENST00000466539 DNMBPQ6XZF7 1577 aa10.43□□□□□ -0.74
PSME4-204ENST00000466539 PRIM1P49642 420 aaKnown RBP10.43□□□□□ -0.74
PSME4-204ENST00000466539 CEP164Q9UPV0 1460 aa10.42□□□□□ -0.74
PSME4-204ENST00000466539 MARVELD3Q96A59 401 aa10.42□□□□□ -0.74
PSME4-204ENST00000466539 URB2Q14146 1524 aaKnown RBP10.42□□□□□ -0.74
PSME4-204ENST00000466539 THOC2Q8NI27 1593 aaKnown RBP10.4□□□□□ -0.74
PSME4-204ENST00000466539 TOPBP1Q92547 1522 aa10.4□□□□□ -0.74
PSME4-204ENST00000466539 OSBPP22059 807 aa10.4□□□□□ -0.74
PSME4-204ENST00000466539 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.4□□□□□ -0.74
PSME4-204ENST00000466539 PCDHGA10Q9Y5H3 936 aa10.4□□□□□ -0.74
PSME4-204ENST00000466539 WDR62O43379 1518 aa10.39□□□□□ -0.75
PSME4-204ENST00000466539 CDAN1Q8IWY9 1227 aa10.39□□□□□ -0.75
PSME4-204ENST00000466539 ZNF316A6NFI3 1004 aaPredicted RBP10.38□□□□□ -0.75
PSME4-204ENST00000466539 RBM26Q5T8P6 1007 aaKnown RBP10.38□□□□□ -0.75
PSME4-204ENST00000466539 WDR97A6NE52 1622 aa10.37□□□□□ -0.75
PSME4-204ENST00000466539 FOSBP53539 338 aa10.37□□□□□ -0.75
PSME4-204ENST00000466539 MRC2Q9UBG0 1479 aa10.36□□□□□ -0.75
PSME4-204ENST00000466539 POTEB3A0JP26 581 aa10.36□□□□□ -0.75
PSME4-204ENST00000466539 POTEBQ6S5H4 581 aa10.36□□□□□ -0.75
PSME4-204ENST00000466539 PHF14O94880 888 aa10.35□□□□□ -0.75
PSME4-204ENST00000466539 ZNF454Q8N9F8 522 aa10.35□□□□□ -0.75
PSME4-204ENST00000466539 JPH4Q96JJ6 628 aa10.35□□□□□ -0.75
PSME4-204ENST00000466539 LMOD2Q6P5Q4 547 aa10.34□□□□□ -0.75
PSME4-204ENST00000466539 POLA1P09884 1462 aaPredicted RBP10.34□□□□□ -0.75
PSME4-204ENST00000466539 TARBP1Q13395 1621 aaKnown RBP10.33□□□□□ -0.76
PSME4-204ENST00000466539 EMP3P54852 163 aa10.33□□□□□ -0.76
PSME4-204ENST00000466539 FGD5Q6ZNL6 1462 aa10.33□□□□□ -0.76
PSME4-204ENST00000466539 ERBB3P21860 1342 aa10.33□□□□□ -0.76
PSME4-204ENST00000466539 FAM205CA6NFA0 338 aa10.32□□□□□ -0.76
PSME4-204ENST00000466539 VARS2Q5ST30 1063 aaKnown RBP10.32□□□□□ -0.76
PSME4-204ENST00000466539 SMYD5Q6GMV2 418 aa10.32□□□□□ -0.76
PSME4-204ENST00000466539 RBM33Q96EV2 1170 aaKnown RBP10.32□□□□□ -0.76
PSME4-204ENST00000466539 ADAM33Q9BZ11 813 aa10.32□□□□□ -0.76
PSME4-204ENST00000466539 ABCA10Q8WWZ4 1543 aa10.32□□□□□ -0.76
PSME4-204ENST00000466539 EEA1Q15075 1411 aa10.32□□□□□ -0.76
PSME4-204ENST00000466539 CUX2O14529 1486 aa10.3□□□□□ -0.76
PSME4-204ENST00000466539 EN1Q05925 392 aaPredicted RBP10.3□□□□□ -0.76
PSME4-204ENST00000466539 TSR1Q2NL82 804 aaKnown RBP10.3□□□□□ -0.76
PSME4-204ENST00000466539 TYW1BQ6NUM6 668 aa10.3□□□□□ -0.76
PSME4-204ENST00000466539 ZDHHC16Q969W1 377 aa10.3□□□□□ -0.76
PSME4-204ENST00000466539 EPAS1Q99814 870 aa10.3□□□□□ -0.76
PSME4-204ENST00000466539 POTEEQ6S8J3 1075 aa10.29□□□□□ -0.76
PSME4-204ENST00000466539 SOGA1O94964 1423 aa10.28□□□□□ -0.76
PSME4-204ENST00000466539 HS3ST6Q96QI5 342 aa10.28□□□□□ -0.76
PSME4-204ENST00000466539 CDHR5Q9HBB8 845 aa10.28□□□□□ -0.76
PSME4-204ENST00000466539 ABCA5Q8WWZ7 1642 aa10.28□□□□□ -0.76
PSME4-204ENST00000466539 PPP4R3BQ5MIZ7 849 aa10.27□□□□□ -0.77
PSME4-204ENST00000466539 RUSC2Q8N2Y8 1516 aa10.27□□□□□ -0.77
PSME4-204ENST00000466539 C6orf132Q5T0Z8 1188 aa10.26□□□□□ -0.77
PSME4-204ENST00000466539 FBXW7Q969H0 707 aa10.26□□□□□ -0.77
PSME4-204ENST00000466539 PSDA5PKW4 1024 aaPredicted RBP10.25□□□□□ -0.77
PSME4-204ENST00000466539 TULP1O00294 542 aaPredicted RBP10.25□□□□□ -0.77
PSME4-204ENST00000466539 GPR37O15354 613 aa10.25□□□□□ -0.77
PSME4-204ENST00000466539 MAP3K7O43318 606 aa10.25□□□□□ -0.77
PSME4-204ENST00000466539 PRKCSHP14314 528 aaPredicted RBP10.25□□□□□ -0.77
PSME4-204ENST00000466539 NPDC1Q9NQX5 325 aaPredicted RBP10.25□□□□□ -0.77
PSME4-204ENST00000466539 NUTM2FA1L443 756 aa10.24□□□□□ -0.77
PSME4-204ENST00000466539 ERCC6Q03468 1493 aa10.23□□□□□ -0.77
PSME4-204ENST00000466539 KIF21BO75037 1637 aa10.23□□□□□ -0.77
PSME4-204ENST00000466539 ZC3H15Q8WU90 426 aaKnown RBP10.23□□□□□ -0.77
PSME4-204ENST00000466539 BCL2L12Q9HB09 334 aa10.23□□□□□ -0.77
PSME4-204ENST00000466539 AXIN2Q9Y2T1 843 aa10.23□□□□□ -0.77
PSME4-204ENST00000466539 IFT140Q96RY7 1462 aa10.23□□□□□ -0.77
PSME4-204ENST00000466539 RAD54L2Q9Y4B4 1467 aa10.23□□□□□ -0.77
PSME4-204ENST00000466539 COL9A1P20849 921 aa10.22□□□□□ -0.77
PSME4-204ENST00000466539 TPRNQ4KMQ1 711 aa10.22□□□□□ -0.77
PSME4-204ENST00000466539 ZNF687Q8N1G0 1237 aa10.22□□□□□ -0.77
PSME4-204ENST00000466539 KIF27Q86VH2 1401 aa10.22□□□□□ -0.77
PSME4-204ENST00000466539 PRXQ9BXM0 1461 aa10.22□□□□□ -0.77
PSME4-204ENST00000466539 PSEN2P49810 448 aa10.21□□□□□ -0.77
PSME4-204ENST00000466539 PTGDRQ13258 359 aa10.21□□□□□ -0.77
PSME4-204ENST00000466539 GPIHBP1Q8IV16 184 aa10.21□□□□□ -0.77
PSME4-204ENST00000466539 ERICH3Q5RHP9 1530 aa10.2□□□□□ -0.78
PSME4-204ENST00000466539 FECHP22830 423 aa10.19□□□□□ -0.78
PSME4-204ENST00000466539 PTPREP23469 700 aa10.18□□□□□ -0.78
PSME4-204ENST00000466539 KCNK17Q96T54 332 aa10.18□□□□□ -0.78
PSME4-204ENST00000466539 IGF1RP08069 1367 aa10.17□□□□□ -0.78
PSME4-204ENST00000466539 DMRTA1Q5VZB9 504 aa10.17□□□□□ -0.78
PSME4-204ENST00000466539 CUL7Q14999 1698 aa10.16□□□□□ -0.78
PSME4-204ENST00000466539 PBRM1Q86U86 1689 aa10.16□□□□□ -0.78
PSME4-204ENST00000466539 ZMYND10O75800 440 aa10.16□□□□□ -0.78
PSME4-204ENST00000466539 EIF4G3O43432 1585 aaKnown RBP10.15□□□□□ -0.78
PSME4-204ENST00000466539 ARHGAP33O14559 1287 aa10.15□□□□□ -0.78
PSME4-204ENST00000466539 FCHSD2O94868 740 aa10.15□□□□□ -0.78
PSME4-204ENST00000466539 GAPVD1Q14C86 1478 aa10.15□□□□□ -0.78
PSME4-204ENST00000466539 ZNF608Q9ULD9 1512 aaPredicted RBP10.14□□□□□ -0.79
PSME4-204ENST00000466539 SPNS2Q8IVW8 549 aa10.14□□□□□ -0.79
PSME4-204ENST00000466539 FAM198AQ9UFP1 575 aa10.14□□□□□ -0.79
PSME4-204ENST00000466539 PPP1R3GB7ZBB8 358 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms