RNA–Protein interactions for RNA: ENST00000466405.1

WDR48-208, Transcript of WD repeat domain 48, humanhuman

TSL 1 (best)

Gene WDR48, Length 4,925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR48-208ENST00000466405 PDCL3Q9H2J4 239 aa8.2□□□□□ -1.1
WDR48-208ENST00000466405 BRD4O60885 1362 aaPredicted RBP8.2□□□□□ -1.1
WDR48-208ENST00000466405 ISY1Q9ULR0 285 aaKnown RBP8.2□□□□□ -1.1
WDR48-208ENST00000466405 CCDC173Q0VFZ6 552 aa8.19□□□□□ -1.1
WDR48-208ENST00000466405 SKAP1Q86WV1 359 aa8.19□□□□□ -1.1
WDR48-208ENST00000466405 C22orf23Q9BZE7 217 aa8.19□□□□□ -1.1
WDR48-208ENST00000466405 FHOD3Q2V2M9 1422 aa8.19□□□□□ -1.1
WDR48-208ENST00000466405 GOLGA6L6A8MZA4 724 aa8.18□□□□□ -1.1
WDR48-208ENST00000466405 MCM4P33991 863 aa8.18□□□□□ -1.1
WDR48-208ENST00000466405 ARAP1Q96P48 1450 aa8.18□□□□□ -1.1
WDR48-208ENST00000466405 ZRSR1Q15695 479 aaKnown RBP8.18□□□□□ -1.1
WDR48-208ENST00000466405 LRRC9Q6ZRR7 1453 aa8.17□□□□□ -1.1
WDR48-208ENST00000466405 E9PSI1 815 aa8.17□□□□□ -1.1
WDR48-208ENST00000466405 PANK3Q9H999 370 aa8.17□□□□□ -1.1
WDR48-208ENST00000466405 IPO8O15397 1037 aaKnown RBP8.17□□□□□ -1.1
WDR48-208ENST00000466405 CLCN1P35523 988 aa8.17□□□□□ -1.1
WDR48-208ENST00000466405 PHF14O94880 888 aa8.17□□□□□ -1.1
WDR48-208ENST00000466405 MCCP23508 829 aa8.16□□□□□ -1.1
WDR48-208ENST00000466405 UQCRHLA0A096LP55 91 aa8.16□□□□□ -1.1
WDR48-208ENST00000466405 UQCRHP07919 91 aa8.16□□□□□ -1.1
WDR48-208ENST00000466405 SMARCA2P51531 1590 aa8.16□□□□□ -1.1
WDR48-208ENST00000466405 GOLGA6L4A6NEF3 574 aa8.16□□□□□ -1.1
WDR48-208ENST00000466405 U2SURPO15042 1029 aaKnown RBP8.16□□□□□ -1.1
WDR48-208ENST00000466405 NRDCO43847 1150 aa8.16□□□□□ -1.1
WDR48-208ENST00000466405 EIF3AQ14152 1382 aaKnown RBP8.16□□□□□ -1.1
WDR48-208ENST00000466405 FOXD4L5Q5VV16 416 aaPredicted RBP8.15□□□□□ -1.1
WDR48-208ENST00000466405 FOXD4L4Q8WXT5 416 aaPredicted RBP8.15□□□□□ -1.1
WDR48-208ENST00000466405 SMC4Q9NTJ3 1288 aa8.15□□□□□ -1.1
WDR48-208ENST00000466405 MORC1Q86VD1 984 aa8.15□□□□□ -1.1
WDR48-208ENST00000466405 CCDC39Q9UFE4 941 aa8.15□□□□□ -1.1
WDR48-208ENST00000466405 FGD6Q6ZV73 1430 aa8.15□□□□□ -1.1
WDR48-208ENST00000466405 BCL2L13Q9BXK5 485 aa8.15□□□□□ -1.1
WDR48-208ENST00000466405 ST18O60284 1047 aa8.14□□□□□ -1.11
WDR48-208ENST00000466405 APAF1O14727 1248 aa8.14□□□□□ -1.11
WDR48-208ENST00000466405 ZSCAN30Q86W11 494 aa8.14□□□□□ -1.11
WDR48-208ENST00000466405 MCTP1Q6DN14 999 aa8.14□□□□□ -1.11
WDR48-208ENST00000466405 NUP155O75694 1391 aa8.14□□□□□ -1.11
WDR48-208ENST00000466405 PLEKHD1A6NEE1 506 aa8.13□□□□□ -1.11
WDR48-208ENST00000466405 PANK1Q8TE04 598 aa8.13□□□□□ -1.11
WDR48-208ENST00000466405 RRAGDQ9NQL2 400 aaPredicted RBP8.13□□□□□ -1.11
WDR48-208ENST00000466405 PRDM10Q9NQV6 1147 aa8.12□□□□□ -1.11
WDR48-208ENST00000466405 XRCC6P12956 609 aaKnown RBP eCLIP8.12□□□□□ -1.11
WDR48-208ENST00000466405 NBPF8Q3BBV2 869 aa8.12□□□□□ -1.11
WDR48-208ENST00000466405 APBB1O00213 710 aa8.12□□□□□ -1.11
WDR48-208ENST00000466405 NUCB2P80303 420 aa8.12□□□□□ -1.11
WDR48-208ENST00000466405 CAVIN1Q6NZI2 390 aaKnown RBP8.12□□□□□ -1.11
WDR48-208ENST00000466405 ZKSCAN2Q63HK3 967 aa8.11□□□□□ -1.11
WDR48-208ENST00000466405 ADAMTS8Q9UP79 889 aa8.11□□□□□ -1.11
WDR48-208ENST00000466405 RRP7AQ9Y3A4 280 aaKnown RBP8.11□□□□□ -1.11
WDR48-208ENST00000466405 U2AF1L5P0DN76 240 aaPredicted RBP8.11□□□□□ -1.11
WDR48-208ENST00000466405 HMGN5P82970 282 aaKnown RBP8.11□□□□□ -1.11
WDR48-208ENST00000466405 U2AF1Q01081 240 aaKnown RBP eCLIP8.11□□□□□ -1.11
WDR48-208ENST00000466405 KIF16BQ96L93 1317 aa8.11□□□□□ -1.11
WDR48-208ENST00000466405 PDZRN3Q9UPQ7 1066 aa8.11□□□□□ -1.11
WDR48-208ENST00000466405 MAPKBP1O60336 1514 aa8.1□□□□□ -1.11
WDR48-208ENST00000466405 NOL8Q76FK4 1167 aaKnown RBP8.1□□□□□ -1.11
WDR48-208ENST00000466405 RNF214Q8ND24 703 aa8.1□□□□□ -1.11
WDR48-208ENST00000466405 ZHX1Q9UKY1 873 aaPredicted RBP8.1□□□□□ -1.11
WDR48-208ENST00000466405 AAMPQ13685 434 aa8.1□□□□□ -1.11
WDR48-208ENST00000466405 PANK2Q9BZ23 570 aa8.1□□□□□ -1.11
WDR48-208ENST00000466405 DIAPH3Q9NSV4 1193 aa8.1□□□□□ -1.11
WDR48-208ENST00000466405 ANKRD45Q5TZF3 282 aa8.1□□□□□ -1.11
WDR48-208ENST00000466405 ERICH3Q5RHP9 1530 aa8.09□□□□□ -1.11
WDR48-208ENST00000466405 FOXD4L6Q3SYB3 417 aaPredicted RBP8.09□□□□□ -1.11
WDR48-208ENST00000466405 C20orf194Q5TEA3 1177 aa8.09□□□□□ -1.11
WDR48-208ENST00000466405 FOXD4L3Q6VB84 417 aaPredicted RBP8.09□□□□□ -1.11
WDR48-208ENST00000466405 SMARCA4P51532 1647 aa8.09□□□□□ -1.11
WDR48-208ENST00000466405 ANKRD30AQ9BXX3 1397 aa8.09□□□□□ -1.11
WDR48-208ENST00000466405 CCDC66A2RUB6 948 aa8.08□□□□□ -1.12
WDR48-208ENST00000466405 HFM1A2PYH4 1435 aa8.08□□□□□ -1.12
WDR48-208ENST00000466405 MYOM3Q5VTT5 1437 aa8.08□□□□□ -1.12
WDR48-208ENST00000466405 BCAR3O75815 825 aa8.08□□□□□ -1.12
WDR48-208ENST00000466405 PDE3AQ14432 1141 aa8.08□□□□□ -1.12
WDR48-208ENST00000466405 DZIP1LQ8IYY4 767 aaKnown RBP8.08□□□□□ -1.12
WDR48-208ENST00000466405 TBC1D2Q9BYX2 928 aa8.08□□□□□ -1.12
WDR48-208ENST00000466405 EIF4G1Q04637 1599 aaKnown RBP8.07□□□□□ -1.12
WDR48-208ENST00000466405 NGEFQ8N5V2 710 aa8.07□□□□□ -1.12
WDR48-208ENST00000466405 DDX19BQ9UMR2 479 aa8.07□□□□□ -1.12
WDR48-208ENST00000466405 ZNF592Q92610 1267 aa8.07□□□□□ -1.12
WDR48-208ENST00000466405 PDE4CQ08493 712 aa8.07□□□□□ -1.12
WDR48-208ENST00000466405 NCOA1Q15788 1441 aa8.07□□□□□ -1.12
WDR48-208ENST00000466405 KCNJ4P48050 445 aa8.07□□□□□ -1.12
WDR48-208ENST00000466405 CIZ1Q9ULV3 898 aaPredicted RBP8.07□□□□□ -1.12
WDR48-208ENST00000466405 SYNJ1O43426 1573 aa8.06□□□□□ -1.12
WDR48-208ENST00000466405 HTATSF1O43719 755 aaKnown RBP8.06□□□□□ -1.12
WDR48-208ENST00000466405 XPCQ01831 940 aaPredicted RBP8.06□□□□□ -1.12
WDR48-208ENST00000466405 LNPKQ9C0E8 428 aa8.06□□□□□ -1.12
WDR48-208ENST00000466405 TIAM1Q13009 1591 aa8.06□□□□□ -1.12
WDR48-208ENST00000466405 PRPF40AO75400 957 aaKnown RBP8.06□□□□□ -1.12
WDR48-208ENST00000466405 CBX1P83916 185 aa8.06□□□□□ -1.12
WDR48-208ENST00000466405 SASS6Q6UVJ0 657 aa8.06□□□□□ -1.12
WDR48-208ENST00000466405 MIA2Q96PC5 1412 aa8.06□□□□□ -1.12
WDR48-208ENST00000466405 TAF3Q5VWG9 929 aa8.05□□□□□ -1.12
WDR48-208ENST00000466405 C8orf34Q49A92 452 aa8.05□□□□□ -1.12
WDR48-208ENST00000466405 PRXQ9BXM0 1461 aa8.04□□□□□ -1.12
WDR48-208ENST00000466405 PLEKHG5O94827 1062 aa8.04□□□□□ -1.12
WDR48-208ENST00000466405 TEX35Q5T0J7 233 aa8.04□□□□□ -1.12
WDR48-208ENST00000466405 TSPY26PQ9H489 355 aa8.04□□□□□ -1.12
WDR48-208ENST00000466405 CUX1P39880 1505 aa8.04□□□□□ -1.12
WDR48-208ENST00000466405 MBD3O95983 291 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms