RNA–Protein interactions for RNA: ENST00000466348.5

PDZRN3-204, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-204ENST00000466348 DEPDC5O75140 1603 aa15.25■□□□□ 0.03
PDZRN3-204ENST00000466348 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.23■□□□□ 0.03
PDZRN3-204ENST00000466348 MYT1LQ9UL68 1186 aa15.23■□□□□ 0.03
PDZRN3-204ENST00000466348 KIDINS220Q9ULH0 1771 aa15.22■□□□□ 0.03
PDZRN3-204ENST00000466348 STAC3Q96MF2 364 aa15.22■□□□□ 0.03
PDZRN3-204ENST00000466348 CCDC144AA2RUR9 1427 aa15.22■□□□□ 0.03
PDZRN3-204ENST00000466348 UHRF1BP1Q6BDS2 1440 aa15.22■□□□□ 0.03
PDZRN3-204ENST00000466348 VWDEQ8N2E2 1590 aa15.21■□□□□ 0.03
PDZRN3-204ENST00000466348 EIF4G2P78344 907 aaKnown RBP eCLIP15.21■□□□□ 0.03
PDZRN3-204ENST00000466348 A2MP01023 1474 aa15.2■□□□□ 0.02
PDZRN3-204ENST00000466348 HECW2Q9P2P5 1572 aa15.2■□□□□ 0.02
PDZRN3-204ENST00000466348 KIF3BO15066 747 aa15.19■□□□□ 0.02
PDZRN3-204ENST00000466348 DIP2BQ9P265 1576 aa15.19■□□□□ 0.02
PDZRN3-204ENST00000466348 PRDM15P57071 1507 aaPredicted RBP15.18■□□□□ 0.02
PDZRN3-204ENST00000466348 BCORL1Q5H9F3 1711 aa15.18■□□□□ 0.02
PDZRN3-204ENST00000466348 FAM69CQ0P6D2 419 aa15.18■□□□□ 0.02
PDZRN3-204ENST00000466348 TET3O43151 1660 aa15.17■□□□□ 0.02
PDZRN3-204ENST00000466348 PLA2R1Q13018 1463 aa15.17■□□□□ 0.02
PDZRN3-204ENST00000466348 LMTK2Q8IWU2 1503 aa15.17■□□□□ 0.02
PDZRN3-204ENST00000466348 PTPRTO14522 1441 aa15.17■□□□□ 0.02
PDZRN3-204ENST00000466348 NBPF8Q3BBV2 869 aa15.16■□□□□ 0.02
PDZRN3-204ENST00000466348 RNF17Q9BXT8 1623 aaKnown RBP15.15■□□□□ 0.02
PDZRN3-204ENST00000466348 HSPA5P11021 654 aaKnown RBP15.13■□□□□ 0.01
PDZRN3-204ENST00000466348 MIER1Q8N108 512 aa15.13■□□□□ 0.01
PDZRN3-204ENST00000466348 NEURL4Q96JN8 1562 aa15.13■□□□□ 0.01
PDZRN3-204ENST00000466348 RICTORQ6R327 1708 aa15.12■□□□□ 0.01
PDZRN3-204ENST00000466348 TRPM2O94759 1503 aa15.12■□□□□ 0.01
PDZRN3-204ENST00000466348 ZMYM4Q5VZL5 1548 aa15.12■□□□□ 0.01
PDZRN3-204ENST00000466348 SPATA31E1Q6ZUB1 1445 aa15.11■□□□□ 0.01
PDZRN3-204ENST00000466348 MROH1Q8NDA8 1641 aa15.11■□□□□ 0.01
PDZRN3-204ENST00000466348 DCAF11Q8TEB1 546 aa15.11■□□□□ 0.01
PDZRN3-204ENST00000466348 RALGAPBQ86X10 1494 aa15.11■□□□□ 0.01
PDZRN3-204ENST00000466348 E9PCH4 1651 aa15.11■□□□□ 0.01
PDZRN3-204ENST00000466348 RAPGEF3O95398 923 aa15.1■□□□□ 0.01
PDZRN3-204ENST00000466348 ARID4BQ4LE39 1312 aaPredicted RBP15.1■□□□□ 0.01
PDZRN3-204ENST00000466348 PPP6R1Q9UPN7 881 aa15.09■□□□□ 0.01
PDZRN3-204ENST00000466348 FRMPD1Q5SYB0 1578 aa15.08■□□□□ 0
PDZRN3-204ENST00000466348 ABCA6Q8N139 1617 aa15.08■□□□□ 0
PDZRN3-204ENST00000466348 DIP2CQ9Y2E4 1556 aa15.07■□□□□ 0
PDZRN3-204ENST00000466348 SPHKAPQ2M3C7 1700 aa15.07■□□□□ 0
PDZRN3-204ENST00000466348 DDX10Q13206 875 aaKnown RBP15.07■□□□□ 0
PDZRN3-204ENST00000466348 EFCAB6Q5THR3 1501 aa15.07■□□□□ 0
PDZRN3-204ENST00000466348 PRAG1Q86YV5 1406 aa15.06■□□□□ 0
PDZRN3-204ENST00000466348 REREQ9P2R6 1566 aa15.05■□□□□ -0
PDZRN3-204ENST00000466348 PPRC1Q5VV67 1664 aaKnown RBP15.05■□□□□ -0
PDZRN3-204ENST00000466348 ARHGAP31Q2M1Z3 1444 aa15.04■□□□□ -0
PDZRN3-204ENST00000466348 GPRASP1Q5JY77 1395 aa15.04■□□□□ -0
PDZRN3-204ENST00000466348 KDM2AQ9Y2K7 1162 aa15.04■□□□□ -0
PDZRN3-204ENST00000466348 WASHC2CQ9Y4E1 1318 aa15.03■□□□□ -0
PDZRN3-204ENST00000466348 CARD11Q9BXL7 1154 aa15.03■□□□□ -0
PDZRN3-204ENST00000466348 CEP152O94986 1710 aa15.03■□□□□ -0
PDZRN3-204ENST00000466348 AGLP35573 1532 aa15.02■□□□□ -0
PDZRN3-204ENST00000466348 CNTLNQ9NXG0 1405 aa15.02■□□□□ -0
PDZRN3-204ENST00000466348 USP47Q96K76 1375 aa15.02■□□□□ -0
PDZRN3-204ENST00000466348 CENPBP07199 599 aaPredicted RBP15.02■□□□□ -0
PDZRN3-204ENST00000466348 RGL3Q3MIN7 710 aa15.02■□□□□ -0
PDZRN3-204ENST00000466348 GGT6Q6P531 493 aa15.02■□□□□ -0
PDZRN3-204ENST00000466348 HIRIP3Q9BW71 556 aaPredicted RBP15.02■□□□□ -0
PDZRN3-204ENST00000466348 ZC3H13Q5T200 1668 aaKnown RBP15.01□□□□□ -0.01
PDZRN3-204ENST00000466348 ZNF326Q5BKZ1 582 aaKnown RBP15.01□□□□□ -0.01
PDZRN3-204ENST00000466348 LAMC1P11047 1609 aa15.01□□□□□ -0.01
PDZRN3-204ENST00000466348 ABCC3O15438 1527 aa15.01□□□□□ -0.01
PDZRN3-204ENST00000466348 KIF13AQ9H1H9 1805 aa15.01□□□□□ -0.01
PDZRN3-204ENST00000466348 ROCK2O75116 1388 aaKnown RBP15□□□□□ -0.01
PDZRN3-204ENST00000466348 CCDC7Q96M83 1385 aa15□□□□□ -0.01
PDZRN3-204ENST00000466348 WASHC2AQ641Q2 1341 aa15□□□□□ -0.01
PDZRN3-204ENST00000466348 ANP32CO43423 234 aa15□□□□□ -0.01
PDZRN3-204ENST00000466348 CCER2I3L3R5 266 aa14.99□□□□□ -0.01
PDZRN3-204ENST00000466348 POLR1AO95602 1720 aaPredicted RBP14.99□□□□□ -0.01
PDZRN3-204ENST00000466348 YEATS2Q9ULM3 1422 aa14.99□□□□□ -0.01
PDZRN3-204ENST00000466348 CLTCL1P53675 1640 aa14.99□□□□□ -0.01
PDZRN3-204ENST00000466348 RPGRIP1LQ68CZ1 1315 aa14.98□□□□□ -0.01
PDZRN3-204ENST00000466348 TSPOAP1O95153 1857 aa14.98□□□□□ -0.01
PDZRN3-204ENST00000466348 TRPM1Q7Z4N2 1603 aa14.98□□□□□ -0.01
PDZRN3-204ENST00000466348 NPATQ14207 1427 aa14.98□□□□□ -0.01
PDZRN3-204ENST00000466348 SLC24A1O60721 1099 aa14.96□□□□□ -0.01
PDZRN3-204ENST00000466348 NOS1P29475 1434 aa14.96□□□□□ -0.01
PDZRN3-204ENST00000466348 KIF1BO60333 1816 aa14.96□□□□□ -0.01
PDZRN3-204ENST00000466348 MYOM2P54296 1465 aa14.95□□□□□ -0.02
PDZRN3-204ENST00000466348 SLC52A1Q9NWF4 448 aa14.95□□□□□ -0.02
PDZRN3-204ENST00000466348 CAMSAP1Q5T5Y3 1602 aa14.94□□□□□ -0.02
PDZRN3-204ENST00000466348 KIF7Q2M1P5 1343 aa14.93□□□□□ -0.02
PDZRN3-204ENST00000466348 KIAA1210Q9ULL0 1709 aa14.93□□□□□ -0.02
PDZRN3-204ENST00000466348 C11orf95C9JLR9 678 aaPredicted RBP14.91□□□□□ -0.02
PDZRN3-204ENST00000466348 MADDQ8WXG6 1647 aa14.91□□□□□ -0.02
PDZRN3-204ENST00000466348 ST20-MTHFSA0A0A6YYL1 179 aa14.9□□□□□ -0.02
PDZRN3-204ENST00000466348 ADGRB3O60242 1522 aa14.9□□□□□ -0.02
PDZRN3-204ENST00000466348 NRXN1Q9ULB1 1477 aa14.89□□□□□ -0.03
PDZRN3-204ENST00000466348 ARHGEF40Q8TER5 1519 aa14.89□□□□□ -0.03
PDZRN3-204ENST00000466348 NBPF1Q3BBV0 1214 aa14.89□□□□□ -0.03
PDZRN3-204ENST00000466348 COL17A1Q9UMD9 1497 aaPredicted RBP14.89□□□□□ -0.03
PDZRN3-204ENST00000466348 PIK3C2BO00750 1634 aa14.88□□□□□ -0.03
PDZRN3-204ENST00000466348 EIF3AQ14152 1382 aaKnown RBP14.86□□□□□ -0.03
PDZRN3-204ENST00000466348 CDCA8Q53HL2 280 aa14.86□□□□□ -0.03
PDZRN3-204ENST00000466348 SCAF11Q99590 1463 aaKnown RBP14.86□□□□□ -0.03
PDZRN3-204ENST00000466348 IFT172Q9UG01 1749 aa14.86□□□□□ -0.03
PDZRN3-204ENST00000466348 ZFYVE9O95405 1425 aa14.85□□□□□ -0.03
PDZRN3-204ENST00000466348 VGFO15240 615 aaPredicted RBP14.85□□□□□ -0.03
PDZRN3-204ENST00000466348 TMF1P82094 1093 aa14.84□□□□□ -0.03
PDZRN3-204ENST00000466348 UGGT1Q9NYU2 1555 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms