RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 FBXW7Q969H0 707 aa7.07□□□□□ -1.28
CCDC93-205ENST00000466171 PPP1R3GB7ZBB8 358 aa7.06□□□□□ -1.28
CCDC93-205ENST00000466171 TYW1BQ6NUM6 668 aa7.06□□□□□ -1.28
CCDC93-205ENST00000466171 CADPS2Q86UW7 1296 aa7.06□□□□□ -1.28
CCDC93-205ENST00000466171 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.06□□□□□ -1.28
CCDC93-205ENST00000466171 PHF14O94880 888 aa7.05□□□□□ -1.28
CCDC93-205ENST00000466171 PCDHGA10Q9Y5H3 936 aa7.05□□□□□ -1.28
CCDC93-205ENST00000466171 GFRA3O60609 400 aa7.04□□□□□ -1.28
CCDC93-205ENST00000466171 EPAS1Q99814 870 aa7.04□□□□□ -1.28
CCDC93-205ENST00000466171 CAMK2BQ13554 666 aa7.03□□□□□ -1.28
CCDC93-205ENST00000466171 AMER1Q5JTC6 1135 aaPredicted RBP7.03□□□□□ -1.28
CCDC93-205ENST00000466171 SPRYD3Q8NCJ5 442 aa7.03□□□□□ -1.28
CCDC93-205ENST00000466171 DPYSL4O14531 572 aa7.02□□□□□ -1.29
CCDC93-205ENST00000466171 ZNF775Q96BV0 537 aaPredicted RBP7.02□□□□□ -1.29
CCDC93-205ENST00000466171 RABGEF1Q9UJ41 708 aa7.02□□□□□ -1.29
CCDC93-205ENST00000466171 BCAMP50895 628 aa7□□□□□ -1.29
CCDC93-205ENST00000466171 ANKK1Q8NFD2 765 aa7□□□□□ -1.29
CCDC93-205ENST00000466171 NRG2O14511 850 aaPredicted RBP6.99□□□□□ -1.29
CCDC93-205ENST00000466171 ONECUT3O60422 494 aaPredicted RBP6.99□□□□□ -1.29
CCDC93-205ENST00000466171 ZNF787Q6DD87 383 aa6.99□□□□□ -1.29
CCDC93-205ENST00000466171 KCNC4Q03721 635 aa6.98□□□□□ -1.29
CCDC93-205ENST00000466171 PROX2Q3B8N5 592 aa6.98□□□□□ -1.29
CCDC93-205ENST00000466171 C6orf132Q5T0Z8 1188 aa6.98□□□□□ -1.29
CCDC93-205ENST00000466171 LAPTM4BQ86VI4 370 aa6.98□□□□□ -1.29
CCDC93-205ENST00000466171 WDR70Q9NW82 654 aa6.98□□□□□ -1.29
CCDC93-205ENST00000466171 COL9A1P20849 921 aa6.97□□□□□ -1.29
CCDC93-205ENST00000466171 SPDYE16A6NNV3 312 aaPredicted RBP6.96□□□□□ -1.3
CCDC93-205ENST00000466171 DDX12PQ92771 950 aa6.96□□□□□ -1.3
CCDC93-205ENST00000466171 RBM33Q96EV2 1170 aaKnown RBP6.96□□□□□ -1.3
CCDC93-205ENST00000466171 KIAA1468Q9P260 1216 aa6.96□□□□□ -1.3
CCDC93-205ENST00000466171 SOWAHBA6NEL2 793 aa6.95□□□□□ -1.3
CCDC93-205ENST00000466171 CFAP44Q96MT7 982 aa6.95□□□□□ -1.3
CCDC93-205ENST00000466171 NBR1Q14596 966 aa6.94□□□□□ -1.3
CCDC93-205ENST00000466171 PDIA6Q15084 440 aa6.94□□□□□ -1.3
CCDC93-205ENST00000466171 E2F4Q16254 413 aa6.94□□□□□ -1.3
CCDC93-205ENST00000466171 NYAP1Q6ZVC0 841 aa6.94□□□□□ -1.3
CCDC93-205ENST00000466171 PAXIP1Q6ZW49 1069 aaPredicted RBP6.94□□□□□ -1.3
CCDC93-205ENST00000466171 WBP1LQ9NX94 342 aa6.94□□□□□ -1.3
CCDC93-205ENST00000466171 TRIM6-TRIM34B2RNG4 842 aa6.93□□□□□ -1.3
CCDC93-205ENST00000466171 MAP3K7O43318 606 aa6.93□□□□□ -1.3
CCDC93-205ENST00000466171 ZFRQ96KR1 1074 aaKnown RBP6.93□□□□□ -1.3
CCDC93-205ENST00000466171 EN1Q05925 392 aaPredicted RBP6.92□□□□□ -1.3
CCDC93-205ENST00000466171 PACS2Q86VP3 889 aa6.92□□□□□ -1.3
CCDC93-205ENST00000466171 PRKD2Q9BZL6 878 aa6.92□□□□□ -1.3
CCDC93-205ENST00000466171 FAM98CQ17RN3 349 aaKnown RBP6.91□□□□□ -1.3
CCDC93-205ENST00000466171 SEPT9Q9UHD8 586 aaPredicted RBP6.91□□□□□ -1.3
CCDC93-205ENST00000466171 CERKQ8TCT0 537 aa6.9□□□□□ -1.3
CCDC93-205ENST00000466171 LRCH3Q96II8 777 aa6.9□□□□□ -1.3
CCDC93-205ENST00000466171 RTN4Q9NQC3 1192 aaKnown RBP6.89□□□□□ -1.31
CCDC93-205ENST00000466171 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.89□□□□□ -1.31
CCDC93-205ENST00000466171 TSR3Q9UJK0 312 aaKnown RBP6.88□□□□□ -1.31
CCDC93-205ENST00000466171 ARIH1Q9Y4X5 557 aaPredicted RBP6.88□□□□□ -1.31
CCDC93-205ENST00000466171 GRXCR2A6NFK2 248 aa6.87□□□□□ -1.31
CCDC93-205ENST00000466171 TSR1Q2NL82 804 aaKnown RBP6.87□□□□□ -1.31
CCDC93-205ENST00000466171 HPS5Q9UPZ3 1129 aa6.86□□□□□ -1.31
CCDC93-205ENST00000466171 PRSS12P56730 875 aa6.85□□□□□ -1.31
CCDC93-205ENST00000466171 CDCA7LQ96GN5 454 aa6.85□□□□□ -1.31
CCDC93-205ENST00000466171 TSKSQ9UJT2 592 aa6.85□□□□□ -1.31
CCDC93-205ENST00000466171 NBPF26B4DH59 902 aa6.84□□□□□ -1.31
CCDC93-205ENST00000466171 HDGFP51858 240 aaKnown RBP6.84□□□□□ -1.31
CCDC93-205ENST00000466171 PPP4CP60510 307 aa6.84□□□□□ -1.31
CCDC93-205ENST00000466171 PDZRN3Q9UPQ7 1066 aa6.84□□□□□ -1.31
CCDC93-205ENST00000466171 V9GY48 417 aaPredicted RBP6.84□□□□□ -1.31
CCDC93-205ENST00000466171 LCE2AQ5TA79 106 aaPredicted RBP6.83□□□□□ -1.32
CCDC93-205ENST00000466171 PNMA3Q9UL41 463 aa6.82□□□□□ -1.32
CCDC93-205ENST00000466171 RBM27Q9P2N5 1060 aaKnown RBP6.81□□□□□ -1.32
CCDC93-205ENST00000466171 POTECB2RU33 542 aa6.8□□□□□ -1.32
CCDC93-205ENST00000466171 SMAPO00193 183 aa6.8□□□□□ -1.32
CCDC93-205ENST00000466171 TJAP1Q5JTD0 557 aa6.8□□□□□ -1.32
CCDC93-205ENST00000466171 PPP1R18Q6NYC8 613 aa6.8□□□□□ -1.32
CCDC93-205ENST00000466171 NECTIN2Q92692 538 aa6.8□□□□□ -1.32
CCDC93-205ENST00000466171 TATDN2Q93075 761 aa6.8□□□□□ -1.32
CCDC93-205ENST00000466171 LOC100996750A0A140TA64 210 aa6.79□□□□□ -1.32
CCDC93-205ENST00000466171 OSBPP22059 807 aa6.79□□□□□ -1.32
CCDC93-205ENST00000466171 SLC4A3P48751 1232 aa6.79□□□□□ -1.32
CCDC93-205ENST00000466171 SAMD7Q7Z3H4 446 aa6.79□□□□□ -1.32
CCDC93-205ENST00000466171 KRTAP4-6Q9BYQ5 205 aa6.79□□□□□ -1.32
CCDC93-205ENST00000466171 RNF40O75150 1001 aa6.77□□□□□ -1.33
CCDC93-205ENST00000466171 NUDT18Q6ZVK8 323 aa6.77□□□□□ -1.33
CCDC93-205ENST00000466171 CDHR5Q9HBB8 845 aa6.77□□□□□ -1.33
CCDC93-205ENST00000466171 FAM198AQ9UFP1 575 aa6.77□□□□□ -1.33
CCDC93-205ENST00000466171 PRIM1P49642 420 aaKnown RBP6.76□□□□□ -1.33
CCDC93-205ENST00000466171 ARHGEF1Q92888 912 aaKnown RBP6.76□□□□□ -1.33
CCDC93-205ENST00000466171 TREML4Q6UXN2 200 aa6.75□□□□□ -1.33
CCDC93-205ENST00000466171 TRIM67Q6ZTA4 783 aa6.75□□□□□ -1.33
CCDC93-205ENST00000466171 SLF2Q8IX21 1173 aa6.75□□□□□ -1.33
CCDC93-205ENST00000466171 MYT1Q01538 1121 aa6.74□□□□□ -1.33
CCDC93-205ENST00000466171 MTRQ99707 1265 aa6.74□□□□□ -1.33
CCDC93-205ENST00000466171 IL21Q9HBE4 155 aa6.74□□□□□ -1.33
CCDC93-205ENST00000466171 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.74□□□□□ -1.33
CCDC93-205ENST00000466171 PADI6Q6TGC4 694 aa6.73□□□□□ -1.33
CCDC93-205ENST00000466171 TSHZ2Q9NRE2 1034 aa6.72□□□□□ -1.33
CCDC93-205ENST00000466171 P3H3Q8IVL6 736 aa6.71□□□□□ -1.34
CCDC93-205ENST00000466171 TTC13Q8NBP0 860 aa6.71□□□□□ -1.34
CCDC93-205ENST00000466171 ZNF516Q92618 1163 aa6.71□□□□□ -1.34
CCDC93-205ENST00000466171 PRR14Q9BWN1 585 aa6.71□□□□□ -1.34
CCDC93-205ENST00000466171 NPDC1Q9NQX5 325 aaPredicted RBP6.71□□□□□ -1.34
CCDC93-205ENST00000466171 C3orf80F5H4A9 247 aa6.7□□□□□ -1.34
CCDC93-205ENST00000466171 SWT1Q5T5J6 900 aaKnown RBP6.7□□□□□ -1.34
CCDC93-205ENST00000466171 GGCXP38435 758 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms