RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 ZMYND10O75800 440 aa10.43□□□□□ -0.74
TPM3-214ENST00000466010 UBTFP17480 764 aaKnown RBP10.43□□□□□ -0.74
TPM3-214ENST00000466010 KCNH8Q96L42 1107 aa10.43□□□□□ -0.74
TPM3-214ENST00000466010 SOX12O15370 315 aa10.42□□□□□ -0.74
TPM3-214ENST00000466010 FHOD3Q2V2M9 1422 aa10.41□□□□□ -0.74
TPM3-214ENST00000466010 FMN1Q68DA7 1419 aa10.41□□□□□ -0.74
TPM3-214ENST00000466010 NUP153P49790 1475 aaKnown RBP10.41□□□□□ -0.74
TPM3-214ENST00000466010 PLEKHD1A6NEE1 506 aa10.4□□□□□ -0.74
TPM3-214ENST00000466010 PITPNM1O00562 1244 aa10.39□□□□□ -0.75
TPM3-214ENST00000466010 PPP1R37O75864 691 aa10.39□□□□□ -0.75
TPM3-214ENST00000466010 RANGAP1P46060 587 aaPredicted RBP10.39□□□□□ -0.75
TPM3-214ENST00000466010 ABCA9Q8IUA7 1624 aa10.39□□□□□ -0.75
TPM3-214ENST00000466010 PDE4AP27815 886 aa10.38□□□□□ -0.75
TPM3-214ENST00000466010 FBXO22Q8NEZ5 403 aa10.38□□□□□ -0.75
TPM3-214ENST00000466010 ARAP3Q8WWN8 1544 aa10.38□□□□□ -0.75
TPM3-214ENST00000466010 NEO1Q92859 1461 aa10.37□□□□□ -0.75
TPM3-214ENST00000466010 ARID3CA6NKF2 412 aa10.37□□□□□ -0.75
TPM3-214ENST00000466010 BARGINQ6ZT62 677 aa10.37□□□□□ -0.75
TPM3-214ENST00000466010 EFCAB3Q8N7B9 438 aa10.37□□□□□ -0.75
TPM3-214ENST00000466010 CDK11AQ9UQ88 783 aaPredicted RBP10.37□□□□□ -0.75
TPM3-214ENST00000466010 COL17A1Q9UMD9 1497 aaPredicted RBP10.36□□□□□ -0.75
TPM3-214ENST00000466010 LARP6Q9BRS8 491 aaKnown RBP10.36□□□□□ -0.75
TPM3-214ENST00000466010 CABP2Q9NPB3 220 aa10.36□□□□□ -0.75
TPM3-214ENST00000466010 AK7Q96M32 723 aa10.35□□□□□ -0.75
TPM3-214ENST00000466010 ARIH1Q9Y4X5 557 aaPredicted RBP10.35□□□□□ -0.75
TPM3-214ENST00000466010 CCDC61Q9Y6R9 512 aa10.35□□□□□ -0.75
TPM3-214ENST00000466010 HECW1Q76N89 1606 aa10.34□□□□□ -0.75
TPM3-214ENST00000466010 PHF8Q9UPP1 1060 aa10.34□□□□□ -0.75
TPM3-214ENST00000466010 FARP1Q9Y4F1 1045 aaPredicted RBP10.34□□□□□ -0.75
TPM3-214ENST00000466010 ARHGAP35Q9NRY4 1499 aa10.34□□□□□ -0.75
TPM3-214ENST00000466010 PAK3O75914 559 aaPredicted RBP10.33□□□□□ -0.76
TPM3-214ENST00000466010 CFAP74Q9C0B2 1584 aa10.32□□□□□ -0.76
TPM3-214ENST00000466010 MFSD10Q14728 455 aa10.32□□□□□ -0.76
TPM3-214ENST00000466010 CHADLQ6NUI6 762 aa10.32□□□□□ -0.76
TPM3-214ENST00000466010 DDX27Q96GQ7 796 aaKnown RBP10.32□□□□□ -0.76
TPM3-214ENST00000466010 NCKAP5LQ9HCH0 1330 aa10.32□□□□□ -0.76
TPM3-214ENST00000466010 KDM4FA0A1W2PPD8 638 aa10.31□□□□□ -0.76
TPM3-214ENST00000466010 GPIHBP1Q8IV16 184 aa10.31□□□□□ -0.76
TPM3-214ENST00000466010 KRI1Q8N9T8 703 aaKnown RBP10.31□□□□□ -0.76
TPM3-214ENST00000466010 ADGRL1O94910 1474 aa10.3□□□□□ -0.76
TPM3-214ENST00000466010 CLIP1P30622 1438 aa10.3□□□□□ -0.76
TPM3-214ENST00000466010 FANCAO15360 1455 aa10.3□□□□□ -0.76
TPM3-214ENST00000466010 CCDC18Q5T9S5 1454 aa10.29□□□□□ -0.76
TPM3-214ENST00000466010 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.28□□□□□ -0.76
TPM3-214ENST00000466010 CASKIN1Q8WXD9 1431 aa10.28□□□□□ -0.76
TPM3-214ENST00000466010 IFNL1Q8IU54 200 aa10.28□□□□□ -0.76
TPM3-214ENST00000466010 ZMYND15Q9H091 742 aa10.28□□□□□ -0.76
TPM3-214ENST00000466010 ATP1B4Q9UN42 357 aaPredicted RBP10.28□□□□□ -0.76
TPM3-214ENST00000466010 CDK13Q14004 1512 aaKnown RBP10.28□□□□□ -0.76
TPM3-214ENST00000466010 PLCH2O75038 1416 aa10.27□□□□□ -0.77
TPM3-214ENST00000466010 CRISPLD2Q9H0B8 497 aa10.27□□□□□ -0.77
TPM3-214ENST00000466010 RSPH6AQ9H0K4 717 aa10.27□□□□□ -0.77
TPM3-214ENST00000466010 DENND4BO75064 1496 aaPredicted RBP10.27□□□□□ -0.77
TPM3-214ENST00000466010 TROQ12816 1431 aaPredicted RBP10.26□□□□□ -0.77
TPM3-214ENST00000466010 AKNAQ7Z591 1439 aa10.26□□□□□ -0.77
TPM3-214ENST00000466010 FYCO1Q9BQS8 1478 aa10.26□□□□□ -0.77
TPM3-214ENST00000466010 PODXL2Q9NZ53 605 aa10.26□□□□□ -0.77
TPM3-214ENST00000466010 KIF14Q15058 1648 aa10.25□□□□□ -0.77
TPM3-214ENST00000466010 MAGI2Q86UL8 1455 aa10.25□□□□□ -0.77
TPM3-214ENST00000466010 CAMK2BQ13554 666 aa10.25□□□□□ -0.77
TPM3-214ENST00000466010 GPBP1L1Q9HC44 474 aaPredicted RBP10.25□□□□□ -0.77
TPM3-214ENST00000466010 TTC37Q6PGP7 1564 aa10.25□□□□□ -0.77
TPM3-214ENST00000466010 RAPGEF3O95398 923 aa10.24□□□□□ -0.77
TPM3-214ENST00000466010 EFCAB2Q5VUJ9 269 aa10.24□□□□□ -0.77
TPM3-214ENST00000466010 IL27Q8NEV9 243 aa10.24□□□□□ -0.77
TPM3-214ENST00000466010 KDM4CQ9H3R0 1056 aa10.23□□□□□ -0.77
TPM3-214ENST00000466010 ZMYM4Q5VZL5 1548 aa10.23□□□□□ -0.77
TPM3-214ENST00000466010 GOLGA2Q08379 1002 aa10.22□□□□□ -0.77
TPM3-214ENST00000466010 FRMPD1Q5SYB0 1578 aa10.22□□□□□ -0.77
TPM3-214ENST00000466010 MAP3K13O43283 966 aa10.21□□□□□ -0.77
TPM3-214ENST00000466010 RBM26Q5T8P6 1007 aaKnown RBP10.21□□□□□ -0.77
TPM3-214ENST00000466010 POGZQ7Z3K3 1410 aa10.21□□□□□ -0.78
TPM3-214ENST00000466010 ARHGEF40Q8TER5 1519 aa10.21□□□□□ -0.78
TPM3-214ENST00000466010 PCF11O94913 1555 aaKnown RBP10.21□□□□□ -0.78
TPM3-214ENST00000466010 MYO5CQ9NQX4 1742 aa10.21□□□□□ -0.78
TPM3-214ENST00000466010 RICTORQ6R327 1708 aa10.2□□□□□ -0.78
TPM3-214ENST00000466010 SCAPERQ9BY12 1400 aa10.2□□□□□ -0.78
TPM3-214ENST00000466010 ARHGAP5Q13017 1502 aa10.19□□□□□ -0.78
TPM3-214ENST00000466010 ZNF518AQ6AHZ1 1483 aa10.19□□□□□ -0.78
TPM3-214ENST00000466010 PDE4DQ08499 809 aa10.19□□□□□ -0.78
TPM3-214ENST00000466010 KIF12Q96FN5 646 aa10.19□□□□□ -0.78
TPM3-214ENST00000466010 ZFYVE16Q7Z3T8 1539 aa10.18□□□□□ -0.78
TPM3-214ENST00000466010 ARID4BQ4LE39 1312 aaPredicted RBP10.18□□□□□ -0.78
TPM3-214ENST00000466010 TRIM66O15016 1216 aa10.18□□□□□ -0.78
TPM3-214ENST00000466010 PRKAR2AP13861 404 aaKnown RBP10.17□□□□□ -0.78
TPM3-214ENST00000466010 MLLT3P42568 568 aaPredicted RBP10.16□□□□□ -0.78
TPM3-214ENST00000466010 MS4A4AQ96JQ5 239 aa10.16□□□□□ -0.78
TPM3-214ENST00000466010 SPDYE16A6NNV3 312 aaPredicted RBP10.15□□□□□ -0.78
TPM3-214ENST00000466010 ADAMTSL3P82987 1691 aa10.15□□□□□ -0.79
TPM3-214ENST00000466010 CEP162Q5TB80 1403 aa10.15□□□□□ -0.79
TPM3-214ENST00000466010 PREX2Q70Z35 1606 aa10.15□□□□□ -0.79
TPM3-214ENST00000466010 BCORL1Q5H9F3 1711 aa10.14□□□□□ -0.79
TPM3-214ENST00000466010 LRRIQ1Q96JM4 1722 aa10.14□□□□□ -0.79
TPM3-214ENST00000466010 PPP1R15BQ5SWA1 713 aa10.14□□□□□ -0.79
TPM3-214ENST00000466010 ATP10AO60312 1499 aa10.14□□□□□ -0.79
TPM3-214ENST00000466010 PTPRMP28827 1452 aa10.14□□□□□ -0.79
TPM3-214ENST00000466010 C9orf84Q5VXU9 1444 aa10.14□□□□□ -0.79
TPM3-214ENST00000466010 KDM5CP41229 1560 aa10.14□□□□□ -0.79
TPM3-214ENST00000466010 MTUS2Q5JR59 1369 aa10.14□□□□□ -0.79
TPM3-214ENST00000466010 PLEKHH2Q8IVE3 1493 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms